RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
VEGFA-218ENST00000518689 DSCR8Q96T75 97 aa6.23□□□□□ -1.41
VEGFA-218ENST00000518689 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
VEGFA-218ENST00000518689 HRES1P13985 223 aa6.22□□□□□ -1.41
VEGFA-218ENST00000518689 C9JAW5 83 aa6.2□□□□□ -1.42
VEGFA-218ENST00000518689 C8orf87E5RJ46 101 aa6.2□□□□□ -1.42
VEGFA-218ENST00000518689 Q6ZQT0 140 aa6.2□□□□□ -1.42
VEGFA-218ENST00000518689 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
VEGFA-218ENST00000518689 J3KT08 172 aa6.17□□□□□ -1.42
VEGFA-218ENST00000518689 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
VEGFA-218ENST00000518689 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
VEGFA-218ENST00000518689 M0R143 59 aa6.16□□□□□ -1.42
VEGFA-218ENST00000518689 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
VEGFA-218ENST00000518689 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
VEGFA-218ENST00000518689 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
VEGFA-218ENST00000518689 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
VEGFA-218ENST00000518689 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
VEGFA-218ENST00000518689 MT2AP02795 61 aa6.14□□□□□ -1.43
VEGFA-218ENST00000518689 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
VEGFA-218ENST00000518689 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
VEGFA-218ENST00000518689 A0A1B0GW54 56 aa6.12□□□□□ -1.43
VEGFA-218ENST00000518689 A8MWP4 228 aa6.11□□□□□ -1.43
VEGFA-218ENST00000518689 SMIM6P0DI80 62 aa6.11□□□□□ -1.43
VEGFA-218ENST00000518689 C14orf132Q9NPU4 83 aa6.11□□□□□ -1.43
VEGFA-218ENST00000518689 USH2AO75445 5202 aa6.1□□□□□ -1.43
VEGFA-218ENST00000518689 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
VEGFA-218ENST00000518689 NDUFB1O75438 58 aa6.1□□□□□ -1.43
VEGFA-218ENST00000518689 SPINK7P58062 85 aa6.1□□□□□ -1.43
VEGFA-218ENST00000518689 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
VEGFA-218ENST00000518689 PCP4L1A6NKN8 68 aa6.09□□□□□ -1.43
VEGFA-218ENST00000518689 MT1FP04733 61 aa6.09□□□□□ -1.43
VEGFA-218ENST00000518689 PDE6GP18545 87 aa6.09□□□□□ -1.43
VEGFA-218ENST00000518689 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
VEGFA-218ENST00000518689 H3BS24 57 aa6.05□□□□□ -1.44
VEGFA-218ENST00000518689 LYRM7Q5U5X0 104 aa6.05□□□□□ -1.44
VEGFA-218ENST00000518689 Q6ZVQ6 151 aa6.05□□□□□ -1.44
VEGFA-218ENST00000518689 PRR15Q8IV56 129 aa6.05□□□□□ -1.44
VEGFA-218ENST00000518689 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
VEGFA-218ENST00000518689 BATFQ16520 125 aa6.04□□□□□ -1.44
VEGFA-218ENST00000518689 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
VEGFA-218ENST00000518689 TSTD3H0UI37 97 aa6.03□□□□□ -1.44
VEGFA-218ENST00000518689 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
VEGFA-218ENST00000518689 NREPQ16612 68 aa6.03□□□□□ -1.44
VEGFA-218ENST00000518689 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
VEGFA-218ENST00000518689 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
VEGFA-218ENST00000518689 TAX1BP3O14907 124 aa6□□□□□ -1.45
VEGFA-218ENST00000518689 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
VEGFA-218ENST00000518689 H3BT86 120 aa5.99□□□□□ -1.45
VEGFA-218ENST00000518689 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
VEGFA-218ENST00000518689 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
VEGFA-218ENST00000518689 A0A1W2PPM0 123 aa5.98□□□□□ -1.45
VEGFA-218ENST00000518689 K7EQZ3 153 aa5.98□□□□□ -1.45
VEGFA-218ENST00000518689 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
VEGFA-218ENST00000518689 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
VEGFA-218ENST00000518689 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
VEGFA-218ENST00000518689 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
VEGFA-218ENST00000518689 Q5W150 140 aa5.92□□□□□ -1.46
VEGFA-218ENST00000518689 BPY2O14599 106 aa5.91□□□□□ -1.46
VEGFA-218ENST00000518689 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
VEGFA-218ENST00000518689 NDUFS5O43920 106 aa5.9□□□□□ -1.46
VEGFA-218ENST00000518689 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
VEGFA-218ENST00000518689 Q8N9L7 120 aa5.89□□□□□ -1.47
VEGFA-218ENST00000518689 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
VEGFA-218ENST00000518689 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
VEGFA-218ENST00000518689 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
VEGFA-218ENST00000518689 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
VEGFA-218ENST00000518689 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
VEGFA-218ENST00000518689 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
VEGFA-218ENST00000518689 A0A1B0GV90 55 aa5.83□□□□□ -1.48
VEGFA-218ENST00000518689 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
VEGFA-218ENST00000518689 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
VEGFA-218ENST00000518689 LINC00846Q9NV44 126 aa5.82□□□□□ -1.48
VEGFA-218ENST00000518689 CXCL6P80162 114 aa5.79□□□□□ -1.48
VEGFA-218ENST00000518689 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
VEGFA-218ENST00000518689 COL5A1-AS1Q5SY13 56 aa5.79□□□□□ -1.48
VEGFA-218ENST00000518689 K7EP34 96 aa5.77□□□□□ -1.49
VEGFA-218ENST00000518689 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
VEGFA-218ENST00000518689 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
VEGFA-218ENST00000518689 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
VEGFA-218ENST00000518689 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
VEGFA-218ENST00000518689 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
VEGFA-218ENST00000518689 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
VEGFA-218ENST00000518689 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
VEGFA-218ENST00000518689 F8W1H4 67 aa5.66□□□□□ -1.5
VEGFA-218ENST00000518689 ETDBQ3ZM63 59 aa5.66□□□□□ -1.5
VEGFA-218ENST00000518689 GTF2H5Q6ZYL4 71 aa5.66□□□□□ -1.5
VEGFA-218ENST00000518689 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
VEGFA-218ENST00000518689 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
VEGFA-218ENST00000518689 S4R3F8 94 aa5.65□□□□□ -1.5
VEGFA-218ENST00000518689 LCA10Q71F78 164 aa5.64□□□□□ -1.51
VEGFA-218ENST00000518689 SYNE2Q8WXH0 6885 aaKnown RBP5.63□□□□□ -1.51
VEGFA-218ENST00000518689 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
VEGFA-218ENST00000518689 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
VEGFA-218ENST00000518689 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
VEGFA-218ENST00000518689 MT1BP07438 61 aa5.59□□□□□ -1.51
VEGFA-218ENST00000518689 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
VEGFA-218ENST00000518689 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
VEGFA-218ENST00000518689 K7ERU9 68 aa5.56□□□□□ -1.52
VEGFA-218ENST00000518689 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
VEGFA-218ENST00000518689 A0A087WVE0 104 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms