RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 NIPBLQ6KC79 2804 aaeCLIP3.78□□□□□ -1.8
RN7SKP248-201ENST00000516278 CACNA1AO00555 2505 aa3.78□□□□□ -1.8
RN7SKP248-201ENST00000516278 CENPEQ02224 2701 aa3.78□□□□□ -1.8
RN7SKP248-201ENST00000516278 UBE2DNLQ8IWF7 75 aa3.78□□□□□ -1.8
RN7SKP248-201ENST00000516278 FBN2P35556 2912 aa3.78□□□□□ -1.8
RN7SKP248-201ENST00000516278 POLQO75417 2590 aa3.77□□□□□ -1.81
RN7SKP248-201ENST00000516278 ABCA12Q86UK0 2595 aa3.77□□□□□ -1.81
RN7SKP248-201ENST00000516278 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
RN7SKP248-201ENST00000516278 J3QKU1 62 aa3.77□□□□□ -1.81
RN7SKP248-201ENST00000516278 FLNAP21333 2647 aaKnown RBP3.77□□□□□ -1.81
RN7SKP248-201ENST00000516278 A0A0G2JQZ4 141 aa3.76□□□□□ -1.81
RN7SKP248-201ENST00000516278 ZNF861PO60384 105 aa3.76□□□□□ -1.81
RN7SKP248-201ENST00000516278 KRTAP10-12P60413 245 aa3.76□□□□□ -1.81
RN7SKP248-201ENST00000516278 KRTAP13-3Q3SY46 172 aa3.76□□□□□ -1.81
RN7SKP248-201ENST00000516278 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
RN7SKP248-201ENST00000516278 SPTBN4Q9H254 2564 aa3.75□□□□□ -1.81
RN7SKP248-201ENST00000516278 ZNF462Q96JM2 2506 aa3.75□□□□□ -1.81
RN7SKP248-201ENST00000516278 SONP18583 2426 aaKnown RBP3.74□□□□□ -1.81
RN7SKP248-201ENST00000516278 K7ERS5 55 aa3.74□□□□□ -1.81
RN7SKP248-201ENST00000516278 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
RN7SKP248-201ENST00000516278 SETD2Q9BYW2 2564 aaPredicted RBP3.74□□□□□ -1.81
RN7SKP248-201ENST00000516278 IGLV7-43P04211 117 aa3.73□□□□□ -1.81
RN7SKP248-201ENST00000516278 CHTF8P0CG12 524 aa3.72□□□□□ -1.81
RN7SKP248-201ENST00000516278 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
RN7SKP248-201ENST00000516278 Q5W150 140 aa3.72□□□□□ -1.81
RN7SKP248-201ENST00000516278 KMT2BQ9UMN6 2715 aaPredicted RBP3.72□□□□□ -1.81
RN7SKP248-201ENST00000516278 LY6G6CO95867 125 aa3.71□□□□□ -1.82
RN7SKP248-201ENST00000516278 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
RN7SKP248-201ENST00000516278 CCDC168Q8NDH2 2452 aa3.71□□□□□ -1.82
RN7SKP248-201ENST00000516278 PIEZO1Q92508 2521 aa3.71□□□□□ -1.82
RN7SKP248-201ENST00000516278 NBDYA0A0U1RRE5 68 aa3.7□□□□□ -1.82
RN7SKP248-201ENST00000516278 NUPR2A6NF83 97 aa3.7□□□□□ -1.82
RN7SKP248-201ENST00000516278 NOTCH2Q04721 2471 aa3.7□□□□□ -1.82
RN7SKP248-201ENST00000516278 UNC79Q9P2D8 2635 aa3.69□□□□□ -1.82
RN7SKP248-201ENST00000516278 HIVEP1P15822 2718 aa3.68□□□□□ -1.82
RN7SKP248-201ENST00000516278 APLNQ9ULZ1 77 aa3.68□□□□□ -1.82
RN7SKP248-201ENST00000516278 MTORP42345 2549 aa3.68□□□□□ -1.82
RN7SKP248-201ENST00000516278 SMR3AQ99954 134 aa3.67□□□□□ -1.82
RN7SKP248-201ENST00000516278 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
RN7SKP248-201ENST00000516278 CSAG1Q6PB30 78 aa3.66□□□□□ -1.82
RN7SKP248-201ENST00000516278 SPINK6Q6UWN8 80 aa3.66□□□□□ -1.82
RN7SKP248-201ENST00000516278 KRTAP11-1Q8IUC1 163 aa3.66□□□□□ -1.82
RN7SKP248-201ENST00000516278 PSORS1C2Q9UIG4 136 aa3.66□□□□□ -1.82
RN7SKP248-201ENST00000516278 PDZD2O15018 2839 aa3.65□□□□□ -1.82
RN7SKP248-201ENST00000516278 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
RN7SKP248-201ENST00000516278 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
RN7SKP248-201ENST00000516278 CIRBP-AS1Q8TBR5 109 aa3.64□□□□□ -1.83
RN7SKP248-201ENST00000516278 VWFP04275 2813 aa3.64□□□□□ -1.83
RN7SKP248-201ENST00000516278 TEP1Q99973 2627 aaKnown RBP3.63□□□□□ -1.83
RN7SKP248-201ENST00000516278 RPS29P62273 56 aaKnown RBP3.63□□□□□ -1.83
RN7SKP248-201ENST00000516278 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
RN7SKP248-201ENST00000516278 ANK3Q12955 4377 aaKnown RBP3.63□□□□□ -1.83
RN7SKP248-201ENST00000516278 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
RN7SKP248-201ENST00000516278 A0A087WTM6 91 aa3.62□□□□□ -1.83
RN7SKP248-201ENST00000516278 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
RN7SKP248-201ENST00000516278 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
RN7SKP248-201ENST00000516278 A8MUU9 505 aa3.61□□□□□ -1.83
RN7SKP248-201ENST00000516278 K7EIL1 84 aa3.61□□□□□ -1.83
RN7SKP248-201ENST00000516278 C1orf134Q5TEV5 83 aa3.61□□□□□ -1.83
RN7SKP248-201ENST00000516278 SPINK1P00995 79 aa3.6□□□□□ -1.83
RN7SKP248-201ENST00000516278 ROMO1P60602 79 aa3.6□□□□□ -1.83
RN7SKP248-201ENST00000516278 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
RN7SKP248-201ENST00000516278 USP24Q9UPU5 2620 aa3.6□□□□□ -1.83
RN7SKP248-201ENST00000516278 ACANP16112 2415 aa3.59□□□□□ -1.83
RN7SKP248-201ENST00000516278 A0A1B0GU33 70 aa3.59□□□□□ -1.83
RN7SKP248-201ENST00000516278 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.83
RN7SKP248-201ENST00000516278 NSD1Q96L73 2696 aaPredicted RBP3.58□□□□□ -1.84
RN7SKP248-201ENST00000516278 PANO1I0J062 215 aa3.58□□□□□ -1.84
RN7SKP248-201ENST00000516278 ATRQ13535 2644 aa3.57□□□□□ -1.84
RN7SKP248-201ENST00000516278 DNAH1Q9P2D7 4330 aa3.57□□□□□ -1.84
RN7SKP248-201ENST00000516278 F8P00451 2351 aa3.57□□□□□ -1.84
RN7SKP248-201ENST00000516278 BAHCC1Q9P281 2608 aa3.56□□□□□ -1.84
RN7SKP248-201ENST00000516278 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
RN7SKP248-201ENST00000516278 H1FX-AS1Q4G0G2 97 aa3.55□□□□□ -1.84
RN7SKP248-201ENST00000516278 ZNF469Q96JG9 3925 aaPredicted RBP3.55□□□□□ -1.84
RN7SKP248-201ENST00000516278 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
RN7SKP248-201ENST00000516278 ITPR2Q14571 2701 aa3.53□□□□□ -1.84
RN7SKP248-201ENST00000516278 MAST4O15021 2626 aa3.53□□□□□ -1.84
RN7SKP248-201ENST00000516278 Q6ZSA8 131 aa3.53□□□□□ -1.84
RN7SKP248-201ENST00000516278 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
RN7SKP248-201ENST00000516278 TENM4Q6N022 2769 aa3.53□□□□□ -1.84
RN7SKP248-201ENST00000516278 HECTD1Q9ULT8 2610 aa3.53□□□□□ -1.84
RN7SKP248-201ENST00000516278 PKD1L1Q8TDX9 2849 aa3.52□□□□□ -1.85
RN7SKP248-201ENST00000516278 OTOGQ6ZRI0 2925 aa3.51□□□□□ -1.85
RN7SKP248-201ENST00000516278 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
RN7SKP248-201ENST00000516278 H0YAA0 97 aa3.51□□□□□ -1.85
RN7SKP248-201ENST00000516278 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
RN7SKP248-201ENST00000516278 HELZ2Q9BYK8 2649 aaKnown RBP3.5□□□□□ -1.85
RN7SKP248-201ENST00000516278 SRRM2Q9UQ35 2752 aaKnown RBP3.5□□□□□ -1.85
RN7SKP248-201ENST00000516278 TENM3Q9P273 2699 aa3.5□□□□□ -1.85
RN7SKP248-201ENST00000516278 CUBNO60494 3623 aa3.5□□□□□ -1.85
RN7SKP248-201ENST00000516278 RPL37P61927 97 aaKnown RBP3.48□□□□□ -1.85
RN7SKP248-201ENST00000516278 TYMSOSQ8TAI1 123 aa3.48□□□□□ -1.85
RN7SKP248-201ENST00000516278 FASNP49327 2511 aaKnown RBP3.47□□□□□ -1.85
RN7SKP248-201ENST00000516278 C20orf166-AS1Q96NR2 134 aa3.47□□□□□ -1.85
RN7SKP248-201ENST00000516278 FLNBO75369 2602 aaKnown RBP3.47□□□□□ -1.85
RN7SKP248-201ENST00000516278 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
RN7SKP248-201ENST00000516278 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
RN7SKP248-201ENST00000516278 CRIPTQ9P021 101 aa3.44□□□□□ -1.86
RN7SKP248-201ENST00000516278 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms