RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 KRTAP29-1A8MX34 341 aaPredicted RBP3.42□□□□□ -1.86
RN7SKP288-201ENST00000516227 Q5XG85 94 aa3.42□□□□□ -1.86
RN7SKP288-201ENST00000516227 TMEM254Q8TBM7 123 aa3.42□□□□□ -1.86
RN7SKP288-201ENST00000516227 RYR2Q92736 4967 aa3.42□□□□□ -1.86
RN7SKP288-201ENST00000516227 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
RN7SKP288-201ENST00000516227 LINC00313P59037 77 aa3.41□□□□□ -1.86
RN7SKP288-201ENST00000516227 MRPL34Q9BQ48 92 aaKnown RBP3.41□□□□□ -1.86
RN7SKP288-201ENST00000516227 MP68P56378 58 aa3.4□□□□□ -1.87
RN7SKP288-201ENST00000516227 RPS29P62273 56 aaKnown RBP3.4□□□□□ -1.87
RN7SKP288-201ENST00000516227 C5orf47Q569G3 176 aa3.4□□□□□ -1.87
RN7SKP288-201ENST00000516227 NOTCH2NLQ7Z3S9 236 aa3.4□□□□□ -1.87
RN7SKP288-201ENST00000516227 H0Y9P7 68 aa3.39□□□□□ -1.87
RN7SKP288-201ENST00000516227 Q8N1X5 172 aa3.39□□□□□ -1.87
RN7SKP288-201ENST00000516227 LRP1BQ9NZR2 4599 aa3.39□□□□□ -1.87
RN7SKP288-201ENST00000516227 DYNC1H1Q14204 4646 aaKnown RBP3.39□□□□□ -1.87
RN7SKP288-201ENST00000516227 FLG2Q5D862 2391 aaPredicted RBP3.38□□□□□ -1.87
RN7SKP288-201ENST00000516227 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
RN7SKP288-201ENST00000516227 LINC00208Q96KT6 92 aa3.38□□□□□ -1.87
RN7SKP288-201ENST00000516227 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
RN7SKP288-201ENST00000516227 TP53AIP1Q9HCN2 124 aa3.38□□□□□ -1.87
RN7SKP288-201ENST00000516227 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
RN7SKP288-201ENST00000516227 TRAV22A0A0B4J277 110 aa3.37□□□□□ -1.87
RN7SKP288-201ENST00000516227 A0A0U1RQV1 116 aa3.37□□□□□ -1.87
RN7SKP288-201ENST00000516227 NDUFC1O43677 76 aa3.37□□□□□ -1.87
RN7SKP288-201ENST00000516227 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
RN7SKP288-201ENST00000516227 TMEM258P61165 79 aa3.36□□□□□ -1.87
RN7SKP288-201ENST00000516227 RETNLBQ9BQ08 111 aa3.36□□□□□ -1.87
RN7SKP288-201ENST00000516227 C9orf92A6NGG3 77 aa3.35□□□□□ -1.87
RN7SKP288-201ENST00000516227 H3BPC8 53 aa3.35□□□□□ -1.87
RN7SKP288-201ENST00000516227 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
RN7SKP288-201ENST00000516227 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
RN7SKP288-201ENST00000516227 KRTAP17-1Q9BYP8 105 aa3.35□□□□□ -1.87
RN7SKP288-201ENST00000516227 FAM236DA0A1B0GTK5 79 aa3.34□□□□□ -1.87
RN7SKP288-201ENST00000516227 H7BZZ5 65 aa3.34□□□□□ -1.87
RN7SKP288-201ENST00000516227 FAM236CP0DP71 79 aa3.34□□□□□ -1.87
RN7SKP288-201ENST00000516227 DMBT1Q9UGM3 2413 aaPredicted RBP3.33□□□□□ -1.88
RN7SKP288-201ENST00000516227 KRTAP16-1A8MUX0 517 aa3.32□□□□□ -1.88
RN7SKP288-201ENST00000516227 ZCCHC13Q8WW36 166 aaKnown RBP3.32□□□□□ -1.88
RN7SKP288-201ENST00000516227 OXTP01178 125 aa3.31□□□□□ -1.88
RN7SKP288-201ENST00000516227 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
RN7SKP288-201ENST00000516227 PCOTHQ58A44 107 aa3.31□□□□□ -1.88
RN7SKP288-201ENST00000516227 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
RN7SKP288-201ENST00000516227 HSPG2P98160 4391 aa3.3□□□□□ -1.88
RN7SKP288-201ENST00000516227 Q5W150 140 aa3.3□□□□□ -1.88
RN7SKP288-201ENST00000516227 LOC101927531A0A1B0GV80 90 aa3.29□□□□□ -1.88
RN7SKP288-201ENST00000516227 PRR4Q16378 134 aa3.29□□□□□ -1.88
RN7SKP288-201ENST00000516227 KRTAP4-5Q9BYR2 181 aa3.29□□□□□ -1.88
RN7SKP288-201ENST00000516227 RYR3Q15413 4870 aa3.28□□□□□ -1.88
RN7SKP288-201ENST00000516227 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
RN7SKP288-201ENST00000516227 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
RN7SKP288-201ENST00000516227 IGLV7-46A0A075B6I9 117 aa3.27□□□□□ -1.89
RN7SKP288-201ENST00000516227 IGKV2D-30A0A075B6S6 120 aa3.27□□□□□ -1.89
RN7SKP288-201ENST00000516227 IGKV2-30P06310 120 aa3.27□□□□□ -1.89
RN7SKP288-201ENST00000516227 KRTAP13-3Q3SY46 172 aa3.27□□□□□ -1.89
RN7SKP288-201ENST00000516227 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
RN7SKP288-201ENST00000516227 FAT1Q14517 4588 aa3.27□□□□□ -1.89
RN7SKP288-201ENST00000516227 A8MUU9 505 aa3.26□□□□□ -1.89
RN7SKP288-201ENST00000516227 CYP4F30PQ9H0H9 118 aa3.26□□□□□ -1.89
RN7SKP288-201ENST00000516227 LCE2BO14633 110 aa3.25□□□□□ -1.89
RN7SKP288-201ENST00000516227 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
RN7SKP288-201ENST00000516227 C20orf166-AS1Q96NR2 134 aa3.25□□□□□ -1.89
RN7SKP288-201ENST00000516227 RPS28P62857 69 aaKnown RBP3.24□□□□□ -1.89
RN7SKP288-201ENST00000516227 C7orf65Q6ZTY9 151 aa3.23□□□□□ -1.89
RN7SKP288-201ENST00000516227 Q75L30 129 aa3.23□□□□□ -1.89
RN7SKP288-201ENST00000516227 TNXBP22105 4242 aa3.23□□□□□ -1.89
RN7SKP288-201ENST00000516227 RYR1P21817 5038 aa3.22□□□□□ -1.89
RN7SKP288-201ENST00000516227 HRES1P13985 223 aa3.22□□□□□ -1.89
RN7SKP288-201ENST00000516227 ATP11AUNQ6ZP68 121 aa3.22□□□□□ -1.89
RN7SKP288-201ENST00000516227 XP32Q5T750 250 aa3.21□□□□□ -1.9
RN7SKP288-201ENST00000516227 LRP1Q07954 4544 aaKnown RBP3.21□□□□□ -1.9
RN7SKP288-201ENST00000516227 RPL37P61927 97 aaKnown RBP3.2□□□□□ -1.9
RN7SKP288-201ENST00000516227 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
RN7SKP288-201ENST00000516227 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
RN7SKP288-201ENST00000516227 ACYP2P14621 99 aa3.19□□□□□ -1.9
RN7SKP288-201ENST00000516227 COA5Q86WW8 74 aa3.19□□□□□ -1.9
RN7SKP288-201ENST00000516227 KIAA1109Q2LD37 5005 aa3.19□□□□□ -1.9
RN7SKP288-201ENST00000516227 EPPK1P58107 5090 aaKnown RBP3.18□□□□□ -1.9
RN7SKP288-201ENST00000516227 CHKB-CPT1BH3BT56 60 aa3.17□□□□□ -1.9
RN7SKP288-201ENST00000516227 SPINK7P58062 85 aa3.17□□□□□ -1.9
RN7SKP288-201ENST00000516227 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
RN7SKP288-201ENST00000516227 C4orf26Q17RF5 130 aa3.16□□□□□ -1.9
RN7SKP288-201ENST00000516227 MPLKIPQ8TAP9 179 aa3.16□□□□□ -1.9
RN7SKP288-201ENST00000516227 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
RN7SKP288-201ENST00000516227 H3BS24 57 aa3.14□□□□□ -1.91
RN7SKP288-201ENST00000516227 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
RN7SKP288-201ENST00000516227 A8MUN3 132 aa3.12□□□□□ -1.91
RN7SKP288-201ENST00000516227 V9GYY9 64 aa3.12□□□□□ -1.91
RN7SKP288-201ENST00000516227 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
RN7SKP288-201ENST00000516227 SEC61BP60468 96 aaKnown RBP3.1□□□□□ -1.91
RN7SKP288-201ENST00000516227 Q1T7F1 81 aa3.1□□□□□ -1.91
RN7SKP288-201ENST00000516227 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
RN7SKP288-201ENST00000516227 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
RN7SKP288-201ENST00000516227 PSPHP1O15172 72 aa3.08□□□□□ -1.92
RN7SKP288-201ENST00000516227 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
RN7SKP288-201ENST00000516227 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
RN7SKP288-201ENST00000516227 RBM12B-AS1Q9P1G2 102 aa3.07□□□□□ -1.92
RN7SKP288-201ENST00000516227 LORP23490 312 aaPredicted RBP3.06□□□□□ -1.92
RN7SKP288-201ENST00000516227 KRTAP3-1Q9BYR8 98 aa3.06□□□□□ -1.92
RN7SKP288-201ENST00000516227 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
RN7SKP288-201ENST00000516227 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms