RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 DEFB116Q30KQ4 102 aa6.97□□□□□ -1.29
LMNA-224ENST00000515711 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
LMNA-224ENST00000515711 UQCRQO14949 82 aa6.96□□□□□ -1.3
LMNA-224ENST00000515711 COX7CP15954 63 aa6.96□□□□□ -1.3
LMNA-224ENST00000515711 C4orf48Q5BLP8 95 aa6.96□□□□□ -1.3
LMNA-224ENST00000515711 TRAV7A0A075B6U4 112 aa6.95□□□□□ -1.3
LMNA-224ENST00000515711 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
LMNA-224ENST00000515711 SPINK1P00995 79 aa6.94□□□□□ -1.3
LMNA-224ENST00000515711 SPAG11AQ6PDA7 123 aa6.94□□□□□ -1.3
LMNA-224ENST00000515711 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
LMNA-224ENST00000515711 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
LMNA-224ENST00000515711 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
LMNA-224ENST00000515711 CASC2Q6XLA1 102 aa6.9□□□□□ -1.3
LMNA-224ENST00000515711 PKHD1L1Q86WI1 4243 aa6.89□□□□□ -1.31
LMNA-224ENST00000515711 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
LMNA-224ENST00000515711 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
LMNA-224ENST00000515711 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
LMNA-224ENST00000515711 KRTAP29-1A8MX34 341 aaPredicted RBP6.88□□□□□ -1.31
LMNA-224ENST00000515711 WFDC13Q8IUB5 93 aa6.88□□□□□ -1.31
LMNA-224ENST00000515711 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
LMNA-224ENST00000515711 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
LMNA-224ENST00000515711 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
LMNA-224ENST00000515711 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
LMNA-224ENST00000515711 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
LMNA-224ENST00000515711 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
LMNA-224ENST00000515711 LRP2P98164 4655 aa6.85□□□□□ -1.31
LMNA-224ENST00000515711 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.31
LMNA-224ENST00000515711 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
LMNA-224ENST00000515711 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
LMNA-224ENST00000515711 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
LMNA-224ENST00000515711 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
LMNA-224ENST00000515711 C5orf47Q569G3 176 aa6.8□□□□□ -1.32
LMNA-224ENST00000515711 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
LMNA-224ENST00000515711 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
LMNA-224ENST00000515711 TP53AIP1Q9HCN2 124 aa6.8□□□□□ -1.32
LMNA-224ENST00000515711 LINC00313P59037 77 aa6.78□□□□□ -1.32
LMNA-224ENST00000515711 NDUFC1O43677 76 aa6.77□□□□□ -1.33
LMNA-224ENST00000515711 H3BPC8 53 aa6.76□□□□□ -1.33
LMNA-224ENST00000515711 MP68P56378 58 aa6.76□□□□□ -1.33
LMNA-224ENST00000515711 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
LMNA-224ENST00000515711 A0A0U1RQV1 116 aa6.74□□□□□ -1.33
LMNA-224ENST00000515711 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
LMNA-224ENST00000515711 NDUFS5O43920 106 aa6.73□□□□□ -1.33
LMNA-224ENST00000515711 TMEM258P61165 79 aa6.73□□□□□ -1.33
LMNA-224ENST00000515711 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
LMNA-224ENST00000515711 H0Y9P7 68 aa6.72□□□□□ -1.33
LMNA-224ENST00000515711 SNURFQ9Y675 71 aa6.71□□□□□ -1.34
LMNA-224ENST00000515711 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
LMNA-224ENST00000515711 OXTP01178 125 aa6.69□□□□□ -1.34
LMNA-224ENST00000515711 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
LMNA-224ENST00000515711 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
LMNA-224ENST00000515711 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
LMNA-224ENST00000515711 H7BZZ5 65 aa6.68□□□□□ -1.34
LMNA-224ENST00000515711 ZCCHC13Q8WW36 166 aaKnown RBP6.68□□□□□ -1.34
LMNA-224ENST00000515711 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
LMNA-224ENST00000515711 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
LMNA-224ENST00000515711 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
LMNA-224ENST00000515711 TNXBP22105 4242 aa6.65□□□□□ -1.35
LMNA-224ENST00000515711 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
LMNA-224ENST00000515711 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
LMNA-224ENST00000515711 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
LMNA-224ENST00000515711 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
LMNA-224ENST00000515711 MT1HL1P0DM35 61 aa6.62□□□□□ -1.35
LMNA-224ENST00000515711 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
LMNA-224ENST00000515711 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
LMNA-224ENST00000515711 MUC2Q02817 5179 aa6.58□□□□□ -1.36
LMNA-224ENST00000515711 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
LMNA-224ENST00000515711 A8MUU9 505 aa6.56□□□□□ -1.36
LMNA-224ENST00000515711 Q5W150 140 aa6.56□□□□□ -1.36
LMNA-224ENST00000515711 SPANXA2-OT1Q8N9U9 137 aa6.56□□□□□ -1.36
LMNA-224ENST00000515711 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
LMNA-224ENST00000515711 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
LMNA-224ENST00000515711 IGKV2-30P06310 120 aa6.52□□□□□ -1.37
LMNA-224ENST00000515711 Q75L30 129 aa6.52□□□□□ -1.37
LMNA-224ENST00000515711 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
LMNA-224ENST00000515711 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
LMNA-224ENST00000515711 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
LMNA-224ENST00000515711 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
LMNA-224ENST00000515711 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
LMNA-224ENST00000515711 LPAP08519 4548 aa6.47□□□□□ -1.37
LMNA-224ENST00000515711 PRR4Q16378 134 aa6.46□□□□□ -1.38
LMNA-224ENST00000515711 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
LMNA-224ENST00000515711 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
LMNA-224ENST00000515711 RPL37P61927 97 aaKnown RBP6.43□□□□□ -1.38
LMNA-224ENST00000515711 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
LMNA-224ENST00000515711 XP32Q5T750 250 aa6.42□□□□□ -1.38
LMNA-224ENST00000515711 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
LMNA-224ENST00000515711 HRES1P13985 223 aa6.4□□□□□ -1.38
LMNA-224ENST00000515711 DMAC1Q96GE9 116 aa6.35□□□□□ -1.39
LMNA-224ENST00000515711 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
LMNA-224ENST00000515711 ACYP2P14621 99 aa6.34□□□□□ -1.39
LMNA-224ENST00000515711 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.39
LMNA-224ENST00000515711 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
LMNA-224ENST00000515711 SPINK7P58062 85 aa6.33□□□□□ -1.4
LMNA-224ENST00000515711 A8MUN3 132 aa6.32□□□□□ -1.4
LMNA-224ENST00000515711 COA5Q86WW8 74 aa6.32□□□□□ -1.4
LMNA-224ENST00000515711 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
LMNA-224ENST00000515711 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
LMNA-224ENST00000515711 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
LMNA-224ENST00000515711 V9GYY9 64 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms