RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
THUMPD3-210ENST00000515662 PRR4Q16378 134 aa8.99□□□□□ -0.97
THUMPD3-210ENST00000515662 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
THUMPD3-210ENST00000515662 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
THUMPD3-210ENST00000515662 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
THUMPD3-210ENST00000515662 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
THUMPD3-210ENST00000515662 KRTAP10-4P60372 401 aaPredicted RBP8.96□□□□□ -0.98
THUMPD3-210ENST00000515662 A0A1B0GVX0 72 aa8.95□□□□□ -0.98
THUMPD3-210ENST00000515662 CDK2AP2O75956 126 aa8.95□□□□□ -0.98
THUMPD3-210ENST00000515662 IGHV6-1A0A0B4J1U7 121 aa8.93□□□□□ -0.98
THUMPD3-210ENST00000515662 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
THUMPD3-210ENST00000515662 C8orf17Q9NRJ1 99 aa8.93□□□□□ -0.98
THUMPD3-210ENST00000515662 hDV103S1A0JD37 113 aa8.92□□□□□ -0.98
THUMPD3-210ENST00000515662 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
THUMPD3-210ENST00000515662 RYR3Q15413 4870 aa8.91□□□□□ -0.98
THUMPD3-210ENST00000515662 FAT1Q14517 4588 aa8.89□□□□□ -0.99
THUMPD3-210ENST00000515662 PRR26Q8N8Z3 221 aa8.89□□□□□ -0.99
THUMPD3-210ENST00000515662 LINC00208Q96KT6 92 aa8.88□□□□□ -0.99
THUMPD3-210ENST00000515662 C1orf195Q5TG92 126 aa8.87□□□□□ -0.99
THUMPD3-210ENST00000515662 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
THUMPD3-210ENST00000515662 LIMD2Q9BT23 127 aa8.87□□□□□ -0.99
THUMPD3-210ENST00000515662 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
THUMPD3-210ENST00000515662 BRK1Q8WUW1 75 aa8.85□□□□□ -0.99
THUMPD3-210ENST00000515662 SPINK1P00995 79 aa8.84□□□□□ -0.99
THUMPD3-210ENST00000515662 MP68P56378 58 aa8.84□□□□□ -0.99
THUMPD3-210ENST00000515662 PRO0628Q9UI54 55 aa8.84□□□□□ -0.99
THUMPD3-210ENST00000515662 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
THUMPD3-210ENST00000515662 H0Y9P7 68 aa8.83□□□□□ -1
THUMPD3-210ENST00000515662 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
THUMPD3-210ENST00000515662 MRPL34Q9BQ48 92 aaKnown RBP8.81□□□□□ -1
THUMPD3-210ENST00000515662 FAM229AH3BQW9 127 aa8.8□□□□□ -1
THUMPD3-210ENST00000515662 C8orf87E5RJ46 101 aa8.79□□□□□ -1
THUMPD3-210ENST00000515662 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
THUMPD3-210ENST00000515662 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
THUMPD3-210ENST00000515662 RPS29P62273 56 aaKnown RBP8.78□□□□□ -1
THUMPD3-210ENST00000515662 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
THUMPD3-210ENST00000515662 NDUFS5O43920 106 aa8.77□□□□□ -1.01
THUMPD3-210ENST00000515662 PSPHP1O15172 72 aa8.76□□□□□ -1.01
THUMPD3-210ENST00000515662 H3BPC8 53 aa8.75□□□□□ -1.01
THUMPD3-210ENST00000515662 LINC00313P59037 77 aa8.75□□□□□ -1.01
THUMPD3-210ENST00000515662 Q5VSD8 79 aa8.73□□□□□ -1.01
THUMPD3-210ENST00000515662 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
THUMPD3-210ENST00000515662 HSPG2P98160 4391 aa8.73□□□□□ -1.01
THUMPD3-210ENST00000515662 Q1T7F1 81 aa8.71□□□□□ -1.01
THUMPD3-210ENST00000515662 RYR1P21817 5038 aa8.69□□□□□ -1.02
THUMPD3-210ENST00000515662 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
THUMPD3-210ENST00000515662 KRTAP16-1A8MUX0 517 aa8.68□□□□□ -1.02
THUMPD3-210ENST00000515662 A8MUN3 132 aa8.66□□□□□ -1.02
THUMPD3-210ENST00000515662 Q8N9P0 234 aaPredicted RBP8.66□□□□□ -1.02
THUMPD3-210ENST00000515662 KRTAP17-1Q9BYP8 105 aa8.66□□□□□ -1.02
THUMPD3-210ENST00000515662 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
THUMPD3-210ENST00000515662 Q5W150 140 aa8.64□□□□□ -1.03
THUMPD3-210ENST00000515662 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
THUMPD3-210ENST00000515662 A8MU10 97 aa8.61□□□□□ -1.03
THUMPD3-210ENST00000515662 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
THUMPD3-210ENST00000515662 KIAA1109Q2LD37 5005 aa8.59□□□□□ -1.03
THUMPD3-210ENST00000515662 Q8N1X5 172 aa8.59□□□□□ -1.03
THUMPD3-210ENST00000515662 COA5Q86WW8 74 aa8.58□□□□□ -1.04
THUMPD3-210ENST00000515662 EPPK1P58107 5090 aaKnown RBP8.58□□□□□ -1.04
THUMPD3-210ENST00000515662 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
THUMPD3-210ENST00000515662 Q5VV11 94 aa8.57□□□□□ -1.04
THUMPD3-210ENST00000515662 LRP1Q07954 4544 aaKnown RBP8.57□□□□□ -1.04
THUMPD3-210ENST00000515662 LOC101927531A0A1B0GV80 90 aa8.55□□□□□ -1.04
THUMPD3-210ENST00000515662 RETNLBQ9BQ08 111 aa8.55□□□□□ -1.04
THUMPD3-210ENST00000515662 TNXBP22105 4242 aa8.54□□□□□ -1.04
THUMPD3-210ENST00000515662 PRR15LQ9BU68 103 aa8.54□□□□□ -1.04
THUMPD3-210ENST00000515662 FLG2Q5D862 2391 aaPredicted RBP8.52□□□□□ -1.05
THUMPD3-210ENST00000515662 V9GYY9 64 aa8.51□□□□□ -1.05
THUMPD3-210ENST00000515662 CHKB-CPT1BH3BT56 60 aa8.5□□□□□ -1.05
THUMPD3-210ENST00000515662 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
THUMPD3-210ENST00000515662 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
THUMPD3-210ENST00000515662 IGKV2-30P06310 120 aa8.46□□□□□ -1.06
THUMPD3-210ENST00000515662 HRES1P13985 223 aa8.46□□□□□ -1.06
THUMPD3-210ENST00000515662 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
THUMPD3-210ENST00000515662 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
THUMPD3-210ENST00000515662 A8MUU9 505 aa8.43□□□□□ -1.06
THUMPD3-210ENST00000515662 MYCBP2O75592 4640 aa8.4□□□□□ -1.06
THUMPD3-210ENST00000515662 LCA10Q71F78 164 aa8.39□□□□□ -1.07
THUMPD3-210ENST00000515662 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
THUMPD3-210ENST00000515662 A6NED7 52 aa8.37□□□□□ -1.07
THUMPD3-210ENST00000515662 Q75L30 129 aa8.37□□□□□ -1.07
THUMPD3-210ENST00000515662 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
THUMPD3-210ENST00000515662 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
THUMPD3-210ENST00000515662 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
THUMPD3-210ENST00000515662 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
THUMPD3-210ENST00000515662 PMAIP1Q13794 54 aa8.32□□□□□ -1.08
THUMPD3-210ENST00000515662 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
THUMPD3-210ENST00000515662 SPINK7P58062 85 aa8.3□□□□□ -1.08
THUMPD3-210ENST00000515662 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
THUMPD3-210ENST00000515662 ACYP2P14621 99 aa8.25□□□□□ -1.09
THUMPD3-210ENST00000515662 CDC42SE1Q9NRR8 79 aa8.22□□□□□ -1.09
THUMPD3-210ENST00000515662 XP32Q5T750 250 aa8.22□□□□□ -1.09
THUMPD3-210ENST00000515662 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
THUMPD3-210ENST00000515662 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
THUMPD3-210ENST00000515662 ABCA13Q86UQ4 5058 aa8.16□□□□□ -1.1
THUMPD3-210ENST00000515662 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
THUMPD3-210ENST00000515662 A6NN06 94 aa8.15□□□□□ -1.1
THUMPD3-210ENST00000515662 HERC2O95714 4834 aa8.13□□□□□ -1.11
THUMPD3-210ENST00000515662 SEC61GP60059 68 aa8.12□□□□□ -1.11
THUMPD3-210ENST00000515662 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms