RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
DDR1-279ENST00000515529 ATP11AUNQ6ZP68 121 aa13.87□□□□□ -0.19
DDR1-279ENST00000515529 NREPQ16612 68 aa13.84□□□□□ -0.19
DDR1-279ENST00000515529 SMCPP49901 116 aaPredicted RBP13.83□□□□□ -0.2
DDR1-279ENST00000515529 A0A1B0GVX0 72 aa13.82□□□□□ -0.2
DDR1-279ENST00000515529 C20orf166-AS1Q96NR2 134 aa13.82□□□□□ -0.2
DDR1-279ENST00000515529 NDUFB1O75438 58 aa13.81□□□□□ -0.2
DDR1-279ENST00000515529 PRO0461Q9UI25 63 aa13.8□□□□□ -0.2
DDR1-279ENST00000515529 A8MUU9 505 aa13.79□□□□□ -0.2
DDR1-279ENST00000515529 C8orf87E5RJ46 101 aa13.79□□□□□ -0.2
DDR1-279ENST00000515529 NOTCH2NLQ7Z3S9 236 aa13.75□□□□□ -0.21
DDR1-279ENST00000515529 A8MWP4 228 aa13.73□□□□□ -0.21
DDR1-279ENST00000515529 KRTAP16-1A8MUX0 517 aa13.71□□□□□ -0.21
DDR1-279ENST00000515529 FAT4Q6V0I7 4981 aa13.7□□□□□ -0.22
DDR1-279ENST00000515529 F8W1H4 67 aa13.7□□□□□ -0.22
DDR1-279ENST00000515529 IGKV3D-7A0A0C4DH55 119 aa13.64□□□□□ -0.23
DDR1-279ENST00000515529 C8orf17Q9NRJ1 99 aa13.62□□□□□ -0.23
DDR1-279ENST00000515529 BPY2O14599 106 aa13.61□□□□□ -0.23
DDR1-279ENST00000515529 PRR15Q8IV56 129 aa13.61□□□□□ -0.23
DDR1-279ENST00000515529 Q6ZVQ6 151 aa13.59□□□□□ -0.23
DDR1-279ENST00000515529 ETDBQ3ZM63 59 aa13.57□□□□□ -0.24
DDR1-279ENST00000515529 UBL5Q9BZL1 73 aa13.56□□□□□ -0.24
DDR1-279ENST00000515529 LCE2AQ5TA79 106 aaPredicted RBP13.54□□□□□ -0.24
DDR1-279ENST00000515529 K7EQZ3 153 aa13.52□□□□□ -0.25
DDR1-279ENST00000515529 COX6B2Q6YFQ2 88 aa13.51□□□□□ -0.25
DDR1-279ENST00000515529 LINC00846Q9NV44 126 aa13.51□□□□□ -0.25
DDR1-279ENST00000515529 Q8N9P0 234 aaPredicted RBP13.48□□□□□ -0.25
DDR1-279ENST00000515529 MMP24-AS1A0A0U1RRL7 71 aa13.46□□□□□ -0.25
DDR1-279ENST00000515529 KRTAP19-2Q3LHN2 52 aa13.46□□□□□ -0.25
DDR1-279ENST00000515529 TMEM254Q8TBM7 123 aa13.45□□□□□ -0.26
DDR1-279ENST00000515529 LCE2CQ5TA81 110 aa13.44□□□□□ -0.26
DDR1-279ENST00000515529 ZCCHC13Q8WW36 166 aaKnown RBP13.44□□□□□ -0.26
DDR1-279ENST00000515529 hDV103S1A0JD37 113 aa13.43□□□□□ -0.26
DDR1-279ENST00000515529 MRPL34Q9BQ48 92 aaKnown RBP13.42□□□□□ -0.26
DDR1-279ENST00000515529 Q8N9L7 120 aa13.4□□□□□ -0.26
DDR1-279ENST00000515529 NDUFS5O43920 106 aa13.36□□□□□ -0.27
DDR1-279ENST00000515529 A0A1B0GV90 55 aa13.35□□□□□ -0.27
DDR1-279ENST00000515529 WFDC13Q8IUB5 93 aa13.33□□□□□ -0.28
DDR1-279ENST00000515529 CASC2Q6XLA1 102 aa13.32□□□□□ -0.28
DDR1-279ENST00000515529 MT1HP80294 61 aa13.3□□□□□ -0.28
DDR1-279ENST00000515529 ACYP1P07311 99 aa13.29□□□□□ -0.28
DDR1-279ENST00000515529 CXCL6P80162 114 aa13.25□□□□□ -0.29
DDR1-279ENST00000515529 RBM12B-AS1Q9P1G2 102 aa13.25□□□□□ -0.29
DDR1-279ENST00000515529 FAM236DA0A1B0GTK5 79 aa13.24□□□□□ -0.29
DDR1-279ENST00000515529 M0R2T5 61 aa13.24□□□□□ -0.29
DDR1-279ENST00000515529 FAM236CP0DP71 79 aa13.24□□□□□ -0.29
DDR1-279ENST00000515529 SPINK7P58062 85 aa13.24□□□□□ -0.29
DDR1-279ENST00000515529 HCG22E2RYF7 251 aa13.23□□□□□ -0.29
DDR1-279ENST00000515529 FAM240AA0A1B0GVK7 77 aa13.21□□□□□ -0.29
DDR1-279ENST00000515529 HRES1P13985 223 aa13.21□□□□□ -0.29
DDR1-279ENST00000515529 MPLKIPQ8TAP9 179 aa13.12□□□□□ -0.31
DDR1-279ENST00000515529 ATP5EP2Q5VTU8 51 aa13.1□□□□□ -0.31
DDR1-279ENST00000515529 FLGP20930 4061 aaPredicted RBP13.08□□□□□ -0.32
DDR1-279ENST00000515529 Q5W150 140 aa13.05□□□□□ -0.32
DDR1-279ENST00000515529 IGKV2D-30A0A075B6S6 120 aa13.04□□□□□ -0.32
DDR1-279ENST00000515529 IGKV2-30P06310 120 aa13.04□□□□□ -0.32
DDR1-279ENST00000515529 KRTAP10-6P60371 365 aaPredicted RBP13□□□□□ -0.33
DDR1-279ENST00000515529 C7orf65Q6ZTY9 151 aa13□□□□□ -0.33
DDR1-279ENST00000515529 J3QR89 54 aa12.99□□□□□ -0.33
DDR1-279ENST00000515529 HIST1H4AP62805 103 aaKnown RBP12.99□□□□□ -0.33
DDR1-279ENST00000515529 TP53AIP1Q9HCN2 124 aa12.99□□□□□ -0.33
DDR1-279ENST00000515529 LINC00643Q86TS7 51 aa12.97□□□□□ -0.33
DDR1-279ENST00000515529 LORP23490 312 aaPredicted RBP12.94□□□□□ -0.34
DDR1-279ENST00000515529 KRTAP9-2Q9BYQ4 174 aa12.89□□□□□ -0.35
DDR1-279ENST00000515529 A0A087WVE0 104 aa12.77□□□□□ -0.37
DDR1-279ENST00000515529 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
DDR1-279ENST00000515529 TRAV22A0A0B4J277 110 aa12.74□□□□□ -0.37
DDR1-279ENST00000515529 H1FX-AS1Q4G0G2 97 aa12.74□□□□□ -0.37
DDR1-279ENST00000515529 C4orf26Q17RF5 130 aa12.73□□□□□ -0.37
DDR1-279ENST00000515529 UQCRQO14949 82 aa12.7□□□□□ -0.38
DDR1-279ENST00000515529 K7ERU9 68 aa12.64□□□□□ -0.39
DDR1-279ENST00000515529 LOC101927531A0A1B0GV80 90 aa12.63□□□□□ -0.39
DDR1-279ENST00000515529 ATOX1O00244 68 aa12.61□□□□□ -0.39
DDR1-279ENST00000515529 KRTAP9-8Q9BYQ0 159 aa12.61□□□□□ -0.39
DDR1-279ENST00000515529 H0Y9P7 68 aa12.6□□□□□ -0.39
DDR1-279ENST00000515529 CYP4F30PQ9H0H9 118 aa12.6□□□□□ -0.39
DDR1-279ENST00000515529 C1orf64Q8NEQ6 169 aa12.57□□□□□ -0.4
DDR1-279ENST00000515529 KRTAP9-6A0A140TA67 174 aa12.51□□□□□ -0.41
DDR1-279ENST00000515529 MT2AP02795 61 aa12.51□□□□□ -0.41
DDR1-279ENST00000515529 SCGB1A1P11684 91 aa12.51□□□□□ -0.41
DDR1-279ENST00000515529 MP68P56378 58 aa12.48□□□□□ -0.41
DDR1-279ENST00000515529 OCR1Q9BZK8 76 aa12.48□□□□□ -0.41
DDR1-279ENST00000515529 KRTAP10-10P60014 251 aa12.46□□□□□ -0.41
DDR1-279ENST00000515529 KRTAP3-1Q9BYR8 98 aa12.45□□□□□ -0.42
DDR1-279ENST00000515529 IMUPQ9GZP8 106 aa12.45□□□□□ -0.42
DDR1-279ENST00000515529 LINC00208Q96KT6 92 aa12.43□□□□□ -0.42
DDR1-279ENST00000515529 MT-ATP8P03928 68 aa12.42□□□□□ -0.42
DDR1-279ENST00000515529 S4R3F8 94 aa12.42□□□□□ -0.42
DDR1-279ENST00000515529 MT1FP04733 61 aa12.41□□□□□ -0.42
DDR1-279ENST00000515529 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
DDR1-279ENST00000515529 H3BPC8 53 aa12.31□□□□□ -0.44
DDR1-279ENST00000515529 LCA10Q71F78 164 aa12.29□□□□□ -0.44
DDR1-279ENST00000515529 CSAG1Q6PB30 78 aa12.28□□□□□ -0.44
DDR1-279ENST00000515529 CRCT1Q9UGL9 99 aa12.27□□□□□ -0.45
DDR1-279ENST00000515529 FAM236AA0A1B0GUQ0 79 aa12.26□□□□□ -0.45
DDR1-279ENST00000515529 FAM236BA0A1B0GV22 79 aa12.26□□□□□ -0.45
DDR1-279ENST00000515529 KLKP1Q107X0 134 aa12.25□□□□□ -0.45
DDR1-279ENST00000515529 FSIP2Q5CZC0 6907 aa12.24□□□□□ -0.45
DDR1-279ENST00000515529 SMIM20Q8N5G0 67 aa12.23□□□□□ -0.45
DDR1-279ENST00000515529 KRTAP9-3Q9BYQ3 159 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms