RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
CLCN3-210ENST00000515420 TRBV20-1A0A075B6N2 111 aa6.74□□□□□ -1.33
CLCN3-210ENST00000515420 A8MUU9 505 aa6.74□□□□□ -1.33
CLCN3-210ENST00000515420 C9JAW5 83 aa6.74□□□□□ -1.33
CLCN3-210ENST00000515420 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
CLCN3-210ENST00000515420 IGKV4-1P06312 121 aa6.74□□□□□ -1.33
CLCN3-210ENST00000515420 NAA38Q9BRA0 125 aaKnown RBP6.74□□□□□ -1.33
CLCN3-210ENST00000515420 KRTAP4-2Q9BYR5 136 aa6.74□□□□□ -1.33
CLCN3-210ENST00000515420 A0A1B0GW54 56 aa6.72□□□□□ -1.33
CLCN3-210ENST00000515420 VPS25Q9BRG1 176 aa6.72□□□□□ -1.33
CLCN3-210ENST00000515420 PDE6GP18545 87 aa6.71□□□□□ -1.34
CLCN3-210ENST00000515420 LINC00313P59037 77 aa6.71□□□□□ -1.34
CLCN3-210ENST00000515420 BATFQ16520 125 aa6.71□□□□□ -1.34
CLCN3-210ENST00000515420 LOC110117498A0A087WWA1 95 aa6.7□□□□□ -1.34
CLCN3-210ENST00000515420 DSCR10P59022 87 aa6.7□□□□□ -1.34
CLCN3-210ENST00000515420 Q6ZQT0 140 aa6.69□□□□□ -1.34
CLCN3-210ENST00000515420 J3KT08 172 aa6.68□□□□□ -1.34
CLCN3-210ENST00000515420 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
CLCN3-210ENST00000515420 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
CLCN3-210ENST00000515420 MT1HP80294 61 aa6.67□□□□□ -1.34
CLCN3-210ENST00000515420 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
CLCN3-210ENST00000515420 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
CLCN3-210ENST00000515420 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
CLCN3-210ENST00000515420 TAX1BP3O14907 124 aa6.65□□□□□ -1.34
CLCN3-210ENST00000515420 IGHV6-1A0A0B4J1U7 121 aa6.64□□□□□ -1.35
CLCN3-210ENST00000515420 A0A1W2PPM0 123 aa6.64□□□□□ -1.35
CLCN3-210ENST00000515420 H3BT86 120 aa6.64□□□□□ -1.35
CLCN3-210ENST00000515420 COX6B2Q6YFQ2 88 aa6.64□□□□□ -1.35
CLCN3-210ENST00000515420 C14orf132Q9NPU4 83 aa6.64□□□□□ -1.35
CLCN3-210ENST00000515420 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
CLCN3-210ENST00000515420 NDUFB1O75438 58 aa6.6□□□□□ -1.35
CLCN3-210ENST00000515420 A8MWP4 228 aa6.57□□□□□ -1.36
CLCN3-210ENST00000515420 NREPQ16612 68 aa6.55□□□□□ -1.36
CLCN3-210ENST00000515420 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
CLCN3-210ENST00000515420 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
CLCN3-210ENST00000515420 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-210ENST00000515420 M0R2T5 61 aa6.53□□□□□ -1.36
CLCN3-210ENST00000515420 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-210ENST00000515420 MTURNQ8N3F0 131 aa6.53□□□□□ -1.36
CLCN3-210ENST00000515420 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-210ENST00000515420 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
CLCN3-210ENST00000515420 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
CLCN3-210ENST00000515420 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
CLCN3-210ENST00000515420 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
CLCN3-210ENST00000515420 PRR15Q8IV56 129 aa6.51□□□□□ -1.37
CLCN3-210ENST00000515420 ZCCHC13Q8WW36 166 aaKnown RBP6.51□□□□□ -1.37
CLCN3-210ENST00000515420 MPLKIPQ8TAP9 179 aa6.49□□□□□ -1.37
CLCN3-210ENST00000515420 Q6ZVQ6 151 aa6.48□□□□□ -1.37
CLCN3-210ENST00000515420 HRES1P13985 223 aa6.47□□□□□ -1.37
CLCN3-210ENST00000515420 RBM12B-AS1Q9P1G2 102 aa6.47□□□□□ -1.37
CLCN3-210ENST00000515420 K7EP34 96 aa6.46□□□□□ -1.38
CLCN3-210ENST00000515420 MMP24-AS1A0A0U1RRL7 71 aa6.45□□□□□ -1.38
CLCN3-210ENST00000515420 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
CLCN3-210ENST00000515420 PRO0461Q9UI25 63 aa6.45□□□□□ -1.38
CLCN3-210ENST00000515420 K7EQZ3 153 aa6.44□□□□□ -1.38
CLCN3-210ENST00000515420 BPY2O14599 106 aa6.44□□□□□ -1.38
CLCN3-210ENST00000515420 FAM236DA0A1B0GTK5 79 aa6.43□□□□□ -1.38
CLCN3-210ENST00000515420 FAM236CP0DP71 79 aa6.43□□□□□ -1.38
CLCN3-210ENST00000515420 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
CLCN3-210ENST00000515420 hDV103S1A0JD37 113 aa6.41□□□□□ -1.38
CLCN3-210ENST00000515420 SPINK7P58062 85 aa6.41□□□□□ -1.38
CLCN3-210ENST00000515420 GTF2H5Q6ZYL4 71 aa6.41□□□□□ -1.38
CLCN3-210ENST00000515420 UBL5Q9BZL1 73 aa6.38□□□□□ -1.39
CLCN3-210ENST00000515420 F8W1H4 67 aa6.37□□□□□ -1.39
CLCN3-210ENST00000515420 PCP4L1A6NKN8 68 aa6.36□□□□□ -1.39
CLCN3-210ENST00000515420 LINC00846Q9NV44 126 aa6.35□□□□□ -1.39
CLCN3-210ENST00000515420 NDUFS5O43920 106 aa6.34□□□□□ -1.39
CLCN3-210ENST00000515420 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
CLCN3-210ENST00000515420 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
CLCN3-210ENST00000515420 Q8N9L7 120 aa6.32□□□□□ -1.4
CLCN3-210ENST00000515420 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
CLCN3-210ENST00000515420 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
CLCN3-210ENST00000515420 ETDBQ3ZM63 59 aa6.3□□□□□ -1.4
CLCN3-210ENST00000515420 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
CLCN3-210ENST00000515420 HCG22E2RYF7 251 aa6.28□□□□□ -1.4
CLCN3-210ENST00000515420 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
CLCN3-210ENST00000515420 CXCL6P80162 114 aa6.27□□□□□ -1.41
CLCN3-210ENST00000515420 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.41
CLCN3-210ENST00000515420 Q5W150 140 aa6.26□□□□□ -1.41
CLCN3-210ENST00000515420 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
CLCN3-210ENST00000515420 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
CLCN3-210ENST00000515420 MT2AP02795 61 aa6.23□□□□□ -1.41
CLCN3-210ENST00000515420 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
CLCN3-210ENST00000515420 ACYP1P07311 99 aa6.21□□□□□ -1.42
CLCN3-210ENST00000515420 FAM240AA0A1B0GVK7 77 aa6.19□□□□□ -1.42
CLCN3-210ENST00000515420 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
CLCN3-210ENST00000515420 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
CLCN3-210ENST00000515420 MT1FP04733 61 aa6.18□□□□□ -1.42
CLCN3-210ENST00000515420 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
CLCN3-210ENST00000515420 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.42
CLCN3-210ENST00000515420 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
CLCN3-210ENST00000515420 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
CLCN3-210ENST00000515420 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
CLCN3-210ENST00000515420 C4orf26Q17RF5 130 aa6.11□□□□□ -1.43
CLCN3-210ENST00000515420 H3BS24 57 aa6.06□□□□□ -1.44
CLCN3-210ENST00000515420 TRAV22A0A0B4J277 110 aa6.05□□□□□ -1.44
CLCN3-210ENST00000515420 USH2AO75445 5202 aa6.04□□□□□ -1.44
CLCN3-210ENST00000515420 A0A1B0GV90 55 aa6.04□□□□□ -1.44
CLCN3-210ENST00000515420 HIST1H4AP62805 103 aaKnown RBP6.03□□□□□ -1.44
CLCN3-210ENST00000515420 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms