RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 CD164Q04900 197 aa8.81□□□□□ -1
PCDH1-208ENST00000515351 BRK1Q8WUW1 75 aa8.81□□□□□ -1
PCDH1-208ENST00000515351 DNAH6Q9C0G6 4158 aa8.81□□□□□ -1
PCDH1-208ENST00000515351 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
PCDH1-208ENST00000515351 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
PCDH1-208ENST00000515351 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
PCDH1-208ENST00000515351 PCOTHQ58A44 107 aa8.78□□□□□ -1
PCDH1-208ENST00000515351 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
PCDH1-208ENST00000515351 DNAH5Q8TE73 4624 aa8.77□□□□□ -1.01
PCDH1-208ENST00000515351 V9GYY9 64 aa8.76□□□□□ -1.01
PCDH1-208ENST00000515351 PSPHP1O15172 72 aa8.75□□□□□ -1.01
PCDH1-208ENST00000515351 Q6ZSA8 131 aa8.75□□□□□ -1.01
PCDH1-208ENST00000515351 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
PCDH1-208ENST00000515351 COA5Q86WW8 74 aa8.73□□□□□ -1.01
PCDH1-208ENST00000515351 KRTAP10-1P60331 282 aa8.72□□□□□ -1.01
PCDH1-208ENST00000515351 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.02
PCDH1-208ENST00000515351 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
PCDH1-208ENST00000515351 A8MUN3 132 aa8.7□□□□□ -1.02
PCDH1-208ENST00000515351 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
PCDH1-208ENST00000515351 KRTAP13-2Q52LG2 175 aa8.7□□□□□ -1.02
PCDH1-208ENST00000515351 PKD1P98161 4303 aa8.69□□□□□ -1.02
PCDH1-208ENST00000515351 KRTAP13-3Q3SY46 172 aa8.69□□□□□ -1.02
PCDH1-208ENST00000515351 Q5W150 140 aa8.69□□□□□ -1.02
PCDH1-208ENST00000515351 LOC101927531A0A1B0GV80 90 aa8.68□□□□□ -1.02
PCDH1-208ENST00000515351 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
PCDH1-208ENST00000515351 Q5VV11 94 aa8.64□□□□□ -1.03
PCDH1-208ENST00000515351 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
PCDH1-208ENST00000515351 LINC00313P59037 77 aa8.63□□□□□ -1.03
PCDH1-208ENST00000515351 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
PCDH1-208ENST00000515351 FAT2Q9NYQ8 4349 aa8.62□□□□□ -1.03
PCDH1-208ENST00000515351 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
PCDH1-208ENST00000515351 HRES1P13985 223 aa8.61□□□□□ -1.03
PCDH1-208ENST00000515351 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
PCDH1-208ENST00000515351 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
PCDH1-208ENST00000515351 CHKB-CPT1BH3BT56 60 aa8.56□□□□□ -1.04
PCDH1-208ENST00000515351 VPS13BQ7Z7G8 4022 aa8.54□□□□□ -1.04
PCDH1-208ENST00000515351 KRTAP16-1A8MUX0 517 aa8.54□□□□□ -1.04
PCDH1-208ENST00000515351 SPAG11AQ6PDA7 123 aa8.54□□□□□ -1.04
PCDH1-208ENST00000515351 Q75L30 129 aa8.54□□□□□ -1.04
PCDH1-208ENST00000515351 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
PCDH1-208ENST00000515351 LINC01558Q9Y6Z2 57 aa8.53□□□□□ -1.04
PCDH1-208ENST00000515351 RETNLBQ9BQ08 111 aa8.5□□□□□ -1.05
PCDH1-208ENST00000515351 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
PCDH1-208ENST00000515351 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
PCDH1-208ENST00000515351 A8MU10 97 aa8.48□□□□□ -1.05
PCDH1-208ENST00000515351 IGKV2-30P06310 120 aa8.48□□□□□ -1.05
PCDH1-208ENST00000515351 ACYP2P14621 99 aa8.48□□□□□ -1.05
PCDH1-208ENST00000515351 DMAC1Q96GE9 116 aa8.47□□□□□ -1.05
PCDH1-208ENST00000515351 SPINK1P00995 79 aa8.46□□□□□ -1.05
PCDH1-208ENST00000515351 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.05
PCDH1-208ENST00000515351 PRR26Q8N8Z3 221 aa8.45□□□□□ -1.06
PCDH1-208ENST00000515351 A6NED7 52 aa8.44□□□□□ -1.06
PCDH1-208ENST00000515351 PKHD1P08F94 4074 aa8.42□□□□□ -1.06
PCDH1-208ENST00000515351 LCA10Q71F78 164 aa8.41□□□□□ -1.06
PCDH1-208ENST00000515351 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
PCDH1-208ENST00000515351 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
PCDH1-208ENST00000515351 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
PCDH1-208ENST00000515351 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
PCDH1-208ENST00000515351 SACSQ9NZJ4 4579 aa8.34□□□□□ -1.07
PCDH1-208ENST00000515351 SPINK7P58062 85 aa8.34□□□□□ -1.08
PCDH1-208ENST00000515351 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
PCDH1-208ENST00000515351 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
PCDH1-208ENST00000515351 SMR3BP02814 79 aaPredicted RBP8.32□□□□□ -1.08
PCDH1-208ENST00000515351 SPTSSBQ8NFR3 76 aa8.31□□□□□ -1.08
PCDH1-208ENST00000515351 SEC61GP60059 68 aa8.3□□□□□ -1.08
PCDH1-208ENST00000515351 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
PCDH1-208ENST00000515351 DYNC1H1Q14204 4646 aaKnown RBP8.28□□□□□ -1.08
PCDH1-208ENST00000515351 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.09
PCDH1-208ENST00000515351 KRTAP10-4P60372 401 aaPredicted RBP8.26□□□□□ -1.09
PCDH1-208ENST00000515351 A0A1B0GU69 56 aa8.23□□□□□ -1.09
PCDH1-208ENST00000515351 A6NN06 94 aa8.2□□□□□ -1.1
PCDH1-208ENST00000515351 APOBP04114 4563 aaKnown RBP8.19□□□□□ -1.1
PCDH1-208ENST00000515351 C9orf92A6NGG3 77 aa8.18□□□□□ -1.1
PCDH1-208ENST00000515351 FAT1Q14517 4588 aa8.18□□□□□ -1.1
PCDH1-208ENST00000515351 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
PCDH1-208ENST00000515351 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
PCDH1-208ENST00000515351 A8MUU9 505 aa8.17□□□□□ -1.1
PCDH1-208ENST00000515351 Q8N1X5 172 aa8.16□□□□□ -1.1
PCDH1-208ENST00000515351 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
PCDH1-208ENST00000515351 RYR2Q92736 4967 aa8.1□□□□□ -1.11
PCDH1-208ENST00000515351 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
PCDH1-208ENST00000515351 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
PCDH1-208ENST00000515351 UQCR11O14957 56 aa8.07□□□□□ -1.12
PCDH1-208ENST00000515351 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
PCDH1-208ENST00000515351 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
PCDH1-208ENST00000515351 KMT2CQ8NEZ4 4911 aaKnown RBP8.01□□□□□ -1.13
PCDH1-208ENST00000515351 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
PCDH1-208ENST00000515351 Q5VSD8 79 aa7.91□□□□□ -1.14
PCDH1-208ENST00000515351 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.14
PCDH1-208ENST00000515351 TNXBP22105 4242 aa7.9□□□□□ -1.15
PCDH1-208ENST00000515351 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.15
PCDH1-208ENST00000515351 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
PCDH1-208ENST00000515351 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
PCDH1-208ENST00000515351 HSPG2P98160 4391 aa7.84□□□□□ -1.15
PCDH1-208ENST00000515351 H0YAA0 97 aa7.82□□□□□ -1.16
PCDH1-208ENST00000515351 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
PCDH1-208ENST00000515351 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
PCDH1-208ENST00000515351 A0A1B0GU33 70 aa7.8□□□□□ -1.16
PCDH1-208ENST00000515351 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
PCDH1-208ENST00000515351 PRAC1Q96KF2 57 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms