RNA–Protein interactions for RNA: ENST00000515261.1

PDLIM3-211, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 622 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-211ENST00000515261 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
PDLIM3-211ENST00000515261 H3BQ85 93 aa7.4□□□□□ -1.22
PDLIM3-211ENST00000515261 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
PDLIM3-211ENST00000515261 TRIAP1O43715 76 aa7.39□□□□□ -1.23
PDLIM3-211ENST00000515261 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
PDLIM3-211ENST00000515261 NEBP20929 6669 aa7.38□□□□□ -1.23
PDLIM3-211ENST00000515261 C14orf144Q96I85 54 aa7.38□□□□□ -1.23
PDLIM3-211ENST00000515261 VPS25Q9BRG1 176 aa7.37□□□□□ -1.23
PDLIM3-211ENST00000515261 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
PDLIM3-211ENST00000515261 A6NJY4 79 aa7.36□□□□□ -1.23
PDLIM3-211ENST00000515261 LYRM7Q5U5X0 104 aa7.36□□□□□ -1.23
PDLIM3-211ENST00000515261 CEND1Q8N111 149 aa7.35□□□□□ -1.23
PDLIM3-211ENST00000515261 J3KT08 172 aa7.33□□□□□ -1.24
PDLIM3-211ENST00000515261 C2orf91Q6ZV80 131 aa7.32□□□□□ -1.24
PDLIM3-211ENST00000515261 NDUFB1O75438 58 aa7.31□□□□□ -1.24
PDLIM3-211ENST00000515261 PSMB2P49721 201 aa7.31□□□□□ -1.24
PDLIM3-211ENST00000515261 UBE2V1Q13404 147 aa7.31□□□□□ -1.24
PDLIM3-211ENST00000515261 PAM16Q9Y3D7 125 aa7.3□□□□□ -1.24
PDLIM3-211ENST00000515261 MUC12Q9UKN1 5478 aa7.3□□□□□ -1.24
PDLIM3-211ENST00000515261 FXYD2P54710 66 aa7.29□□□□□ -1.24
PDLIM3-211ENST00000515261 SPATA45Q537H7 98 aa7.29□□□□□ -1.24
PDLIM3-211ENST00000515261 COX6CP09669 75 aa7.28□□□□□ -1.24
PDLIM3-211ENST00000515261 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
PDLIM3-211ENST00000515261 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
PDLIM3-211ENST00000515261 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
PDLIM3-211ENST00000515261 VAMP8Q9BV40 100 aa7.28□□□□□ -1.24
PDLIM3-211ENST00000515261 TMA7Q9Y2S6 64 aaKnown RBP7.28□□□□□ -1.24
PDLIM3-211ENST00000515261 C21orf62-AS1Q17RA5 79 aa7.26□□□□□ -1.25
PDLIM3-211ENST00000515261 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
PDLIM3-211ENST00000515261 IGKV3D-7A0A0C4DH55 119 aa7.24□□□□□ -1.25
PDLIM3-211ENST00000515261 KRTAP20-1Q3LI63 56 aa7.24□□□□□ -1.25
PDLIM3-211ENST00000515261 A6NN06 94 aa7.23□□□□□ -1.25
PDLIM3-211ENST00000515261 Q6ZQT0 140 aa7.23□□□□□ -1.25
PDLIM3-211ENST00000515261 PYY3Q5JQD4 70 aa7.22□□□□□ -1.25
PDLIM3-211ENST00000515261 C9JAW5 83 aa7.21□□□□□ -1.26
PDLIM3-211ENST00000515261 K7ERJ3 54 aa7.2□□□□□ -1.26
PDLIM3-211ENST00000515261 Q6ZVQ6 151 aa7.2□□□□□ -1.26
PDLIM3-211ENST00000515261 HSD52Q0P140 79 aa7.14□□□□□ -1.27
PDLIM3-211ENST00000515261 SCGB1C2P0DMR2 95 aa7.13□□□□□ -1.27
PDLIM3-211ENST00000515261 BAALC-AS2P0C853 105 aa7.12□□□□□ -1.27
PDLIM3-211ENST00000515261 MRPL34Q9BQ48 92 aaKnown RBP7.12□□□□□ -1.27
PDLIM3-211ENST00000515261 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
PDLIM3-211ENST00000515261 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
PDLIM3-211ENST00000515261 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
PDLIM3-211ENST00000515261 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
PDLIM3-211ENST00000515261 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 A0A1B0GW54 56 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 NDUFS5O43920 106 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 MT1BP07438 61 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 Q5VV11 94 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 TMEM254Q8TBM7 123 aa7.1□□□□□ -1.27
PDLIM3-211ENST00000515261 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
PDLIM3-211ENST00000515261 C7orf65Q6ZTY9 151 aa7.06□□□□□ -1.28
PDLIM3-211ENST00000515261 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
PDLIM3-211ENST00000515261 KRTAP5-9P26371 169 aa7.05□□□□□ -1.28
PDLIM3-211ENST00000515261 LOC110117498A0A087WWA1 95 aa7.04□□□□□ -1.28
PDLIM3-211ENST00000515261 hDV103S1A0JD37 113 aa7.04□□□□□ -1.28
PDLIM3-211ENST00000515261 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
PDLIM3-211ENST00000515261 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
PDLIM3-211ENST00000515261 NREPQ16612 68 aa7.03□□□□□ -1.28
PDLIM3-211ENST00000515261 PDE6GP18545 87 aa7.02□□□□□ -1.29
PDLIM3-211ENST00000515261 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.29
PDLIM3-211ENST00000515261 SMIM6P0DI80 62 aa7.01□□□□□ -1.29
PDLIM3-211ENST00000515261 C4orf26Q17RF5 130 aa7.01□□□□□ -1.29
PDLIM3-211ENST00000515261 SPRR2GQ9BYE4 73 aa7□□□□□ -1.29
PDLIM3-211ENST00000515261 KMT2DO14686 5537 aa7□□□□□ -1.29
PDLIM3-211ENST00000515261 MDN1Q9NU22 5596 aa7□□□□□ -1.29
PDLIM3-211ENST00000515261 Q5W150 140 aa6.99□□□□□ -1.29
PDLIM3-211ENST00000515261 K7EQZ3 153 aa6.98□□□□□ -1.29
PDLIM3-211ENST00000515261 C14orf132Q9NPU4 83 aa6.98□□□□□ -1.29
PDLIM3-211ENST00000515261 ATXN8Q156A1 80 aa6.97□□□□□ -1.29
PDLIM3-211ENST00000515261 LOC105371267A0A1B0GV96 52 aa6.94□□□□□ -1.3
PDLIM3-211ENST00000515261 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
PDLIM3-211ENST00000515261 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
PDLIM3-211ENST00000515261 M0R143 59 aa6.93□□□□□ -1.3
PDLIM3-211ENST00000515261 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
PDLIM3-211ENST00000515261 S4R3F8 94 aa6.92□□□□□ -1.3
PDLIM3-211ENST00000515261 TSTD3H0UI37 97 aa6.91□□□□□ -1.3
PDLIM3-211ENST00000515261 IMUPQ9GZP8 106 aa6.91□□□□□ -1.3
PDLIM3-211ENST00000515261 HCG22E2RYF7 251 aa6.88□□□□□ -1.31
PDLIM3-211ENST00000515261 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
PDLIM3-211ENST00000515261 LCA10Q71F78 164 aa6.87□□□□□ -1.31
PDLIM3-211ENST00000515261 BPY2O14599 106 aa6.86□□□□□ -1.31
PDLIM3-211ENST00000515261 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
PDLIM3-211ENST00000515261 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
PDLIM3-211ENST00000515261 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
PDLIM3-211ENST00000515261 CXCL6P80162 114 aa6.83□□□□□ -1.32
PDLIM3-211ENST00000515261 BATFQ16520 125 aa6.82□□□□□ -1.32
PDLIM3-211ENST00000515261 C1orf64Q8NEQ6 169 aa6.82□□□□□ -1.32
PDLIM3-211ENST00000515261 Q8N9L7 120 aa6.8□□□□□ -1.32
PDLIM3-211ENST00000515261 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
PDLIM3-211ENST00000515261 SPRR2EP22531 72 aa6.78□□□□□ -1.32
PDLIM3-211ENST00000515261 SPRR2BP35325 72 aa6.78□□□□□ -1.32
PDLIM3-211ENST00000515261 SPRR2AP35326 72 aa6.78□□□□□ -1.32
PDLIM3-211ENST00000515261 CRIPTQ9P021 101 aa6.75□□□□□ -1.33
PDLIM3-211ENST00000515261 C9orf118A6NHY6 69 aa6.73□□□□□ -1.33
PDLIM3-211ENST00000515261 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
PDLIM3-211ENST00000515261 A0A1W2PPM0 123 aa6.69□□□□□ -1.34
PDLIM3-211ENST00000515261 KRTAP2-2Q9BYT5 123 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms