RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 TMEM141Q96I45 108 aa2.48□□□□□ -2.01
CAST-243ENST00000515160 LINC01549A6NIU2 74 aa2.47□□□□□ -2.01
CAST-243ENST00000515160 MT-ND4LP03901 98 aa2.47□□□□□ -2.01
CAST-243ENST00000515160 Q8IZM0 81 aa2.47□□□□□ -2.01
CAST-243ENST00000515160 TOMM7Q9P0U1 55 aa2.47□□□□□ -2.01
CAST-243ENST00000515160 C22orf24Q9Y442 160 aa2.47□□□□□ -2.01
CAST-243ENST00000515160 IGKV2D-26A0A0A0MRZ7 120 aa2.46□□□□□ -2.02
CAST-243ENST00000515160 H3BMG7 143 aa2.46□□□□□ -2.02
CAST-243ENST00000515160 DPM2O94777 84 aa2.46□□□□□ -2.02
CAST-243ENST00000515160 C2orf82Q6UX34 121 aa2.46□□□□□ -2.02
CAST-243ENST00000515160 AMELXQ99217 191 aa2.46□□□□□ -2.02
CAST-243ENST00000515160 NXT2Q9NPJ8 142 aaKnown RBP2.46□□□□□ -2.02
CAST-243ENST00000515160 IGIPA6NJ69 53 aa2.45□□□□□ -2.02
CAST-243ENST00000515160 F8VRH5 84 aa2.45□□□□□ -2.02
CAST-243ENST00000515160 BCE1O60756 84 aa2.45□□□□□ -2.02
CAST-243ENST00000515160 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
CAST-243ENST00000515160 BRK1Q8WUW1 75 aa2.45□□□□□ -2.02
CAST-243ENST00000515160 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
CAST-243ENST00000515160 RAB37Q96AX2 223 aa2.44□□□□□ -2.02
CAST-243ENST00000515160 CDKN2A-AS1Q9UH64 79 aa2.44□□□□□ -2.02
CAST-243ENST00000515160 C9JAW5 83 aa2.43□□□□□ -2.02
CAST-243ENST00000515160 H3BRM9 83 aa2.43□□□□□ -2.02
CAST-243ENST00000515160 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
CAST-243ENST00000515160 COX7B2Q8TF08 81 aa2.43□□□□□ -2.02
CAST-243ENST00000515160 ZNF625Q96I27 306 aaPredicted RBP2.43□□□□□ -2.02
CAST-243ENST00000515160 FABP4P15090 132 aa2.42□□□□□ -2.02
CAST-243ENST00000515160 S100PP25815 95 aa2.42□□□□□ -2.02
CAST-243ENST00000515160 PCOTHQ58A44 107 aa2.42□□□□□ -2.02
CAST-243ENST00000515160 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
CAST-243ENST00000515160 A0A087WSZ3 146 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 M0R2T5 61 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 ERC2-IT1O76042 136 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 COX17Q14061 63 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 SPAG11AQ6PDA7 123 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 SFTA2Q6UW10 78 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 KRTAP13-1Q8IUC0 172 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 SMCO4Q9NRQ5 59 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 HSPB8Q9UJY1 196 aa2.41□□□□□ -2.02
CAST-243ENST00000515160 KMT2DO14686 5537 aa2.4□□□□□ -2.02
CAST-243ENST00000515160 LINC01546A6NGU7 62 aa2.4□□□□□ -2.03
CAST-243ENST00000515160 SPINK8P0C7L1 97 aa2.4□□□□□ -2.03
CAST-243ENST00000515160 ADCYAP1P18509 176 aa2.4□□□□□ -2.03
CAST-243ENST00000515160 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
CAST-243ENST00000515160 CLLU1Q5K131 121 aa2.4□□□□□ -2.03
CAST-243ENST00000515160 Q5XG85 94 aa2.4□□□□□ -2.03
CAST-243ENST00000515160 TMEM218A2RU14 115 aa2.39□□□□□ -2.03
CAST-243ENST00000515160 LINC00587B1AMM8 73 aa2.39□□□□□ -2.03
CAST-243ENST00000515160 ERG28Q9UKR5 140 aa2.39□□□□□ -2.03
CAST-243ENST00000515160 IGLC3P0DOY3 106 aa2.38□□□□□ -2.03
CAST-243ENST00000515160 LINC00158P58513 81 aa2.38□□□□□ -2.03
CAST-243ENST00000515160 SEC11CQ9BY50 192 aa2.38□□□□□ -2.03
CAST-243ENST00000515160 MT2AP02795 61 aa2.37□□□□□ -2.03
CAST-243ENST00000515160 KRTAP12-1P59990 96 aa2.37□□□□□ -2.03
CAST-243ENST00000515160 PRLHP81277 87 aa2.37□□□□□ -2.03
CAST-243ENST00000515160 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
CAST-243ENST00000515160 SSBP3-AS1Q7Z2R9 100 aa2.37□□□□□ -2.03
CAST-243ENST00000515160 BAGE3Q86Y29 109 aa2.37□□□□□ -2.03
CAST-243ENST00000515160 NAA38Q9BRA0 125 aaKnown RBP2.37□□□□□ -2.03
CAST-243ENST00000515160 UQCRQO14949 82 aa2.36□□□□□ -2.03
CAST-243ENST00000515160 SPINK1P00995 79 aa2.36□□□□□ -2.03
CAST-243ENST00000515160 HBDP02042 147 aa2.36□□□□□ -2.03
CAST-243ENST00000515160 MT1FP04733 61 aa2.36□□□□□ -2.03
CAST-243ENST00000515160 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.36□□□□□ -2.03
CAST-243ENST00000515160 CLEC2BQ92478 149 aa2.36□□□□□ -2.03
CAST-243ENST00000515160 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
CAST-243ENST00000515160 ETDCA0A1B0GVM5 59 aa2.35□□□□□ -2.03
CAST-243ENST00000515160 TRACP01848 142 aa2.35□□□□□ -2.03
CAST-243ENST00000515160 MEIG1Q5JSS6 88 aa2.35□□□□□ -2.03
CAST-243ENST00000515160 SPRR4Q96PI1 79 aa2.35□□□□□ -2.03
CAST-243ENST00000515160 KCNQ1DNQ9H478 68 aa2.35□□□□□ -2.03
CAST-243ENST00000515160 NDUFA12Q9UI09 145 aa2.35□□□□□ -2.03
CAST-243ENST00000515160 MYMXA0A1B0GTQ4 84 aa2.34□□□□□ -2.03
CAST-243ENST00000515160 SMIM13P0DJ93 91 aa2.34□□□□□ -2.03
CAST-243ENST00000515160 SPRR1AP35321 89 aa2.34□□□□□ -2.03
CAST-243ENST00000515160 RPS29P62273 56 aaKnown RBP2.34□□□□□ -2.03
CAST-243ENST00000515160 C18orf32Q8TCD1 76 aa2.34□□□□□ -2.03
CAST-243ENST00000515160 FAM19A2Q8N3H0 131 aa2.33□□□□□ -2.04
CAST-243ENST00000515160 IFI27L1Q96BM0 104 aa2.33□□□□□ -2.04
CAST-243ENST00000515160 ORMDL1Q9P0S3 153 aa2.33□□□□□ -2.04
CAST-243ENST00000515160 LOC107984156A0A0G2JMH3 177 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 PMCHL1Q16048 86 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 TEN1Q86WV5 123 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 ARL17AQ8IVW1 177 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 SVBPQ8N300 66 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 SNURFQ9Y675 71 aa2.32□□□□□ -2.04
CAST-243ENST00000515160 TRBV10-3A0A0K0K1G6 114 aa2.31□□□□□ -2.04
CAST-243ENST00000515160 NCR3O14931 201 aa2.31□□□□□ -2.04
CAST-243ENST00000515160 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
CAST-243ENST00000515160 APOC3P02656 99 aa2.31□□□□□ -2.04
CAST-243ENST00000515160 F8W1H4 67 aa2.3□□□□□ -2.04
CAST-243ENST00000515160 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
CAST-243ENST00000515160 TRAV23DV6A0A075B6W5 121 aa2.29□□□□□ -2.04
CAST-243ENST00000515160 IGKCP01834 107 aa2.29□□□□□ -2.04
CAST-243ENST00000515160 PLNP26678 52 aa2.29□□□□□ -2.04
CAST-243ENST00000515160 C9orf153Q5TBE3 101 aa2.29□□□□□ -2.04
CAST-243ENST00000515160 Q6ZRX8 168 aa2.29□□□□□ -2.04
CAST-243ENST00000515160 LIMD2Q9BT23 127 aa2.29□□□□□ -2.04
CAST-243ENST00000515160 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms