RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 OXTP01178 125 aa13.29□□□□□ -0.28
PDE4D-223ENST00000515011 SPINK6Q6UWN8 80 aa13.28□□□□□ -0.28
PDE4D-223ENST00000515011 SERP1Q9Y6X1 66 aa13.28□□□□□ -0.28
PDE4D-223ENST00000515011 H0Y9P7 68 aa13.26□□□□□ -0.29
PDE4D-223ENST00000515011 Q5XG85 94 aa13.26□□□□□ -0.29
PDE4D-223ENST00000515011 DYNC1H1Q14204 4646 aaKnown RBP13.25□□□□□ -0.29
PDE4D-223ENST00000515011 H3BPC8 53 aa13.25□□□□□ -0.29
PDE4D-223ENST00000515011 TP53AIP1Q9HCN2 124 aa13.22□□□□□ -0.29
PDE4D-223ENST00000515011 NOTCH2NLQ7Z3S9 236 aa13.22□□□□□ -0.29
PDE4D-223ENST00000515011 LINC00208Q96KT6 92 aa13.22□□□□□ -0.29
PDE4D-223ENST00000515011 PLA2G1BP04054 148 aaKnown RBP13.21□□□□□ -0.29
PDE4D-223ENST00000515011 MRPL34Q9BQ48 92 aaKnown RBP13.21□□□□□ -0.29
PDE4D-223ENST00000515011 TRAV22A0A0B4J277 110 aa13.2□□□□□ -0.3
PDE4D-223ENST00000515011 C1orf195Q5TG92 126 aa13.15□□□□□ -0.3
PDE4D-223ENST00000515011 LIMD2Q9BT23 127 aa13.15□□□□□ -0.3
PDE4D-223ENST00000515011 TYMSOSQ8TAI1 123 aa13.15□□□□□ -0.3
PDE4D-223ENST00000515011 C8orf87E5RJ46 101 aa13.14□□□□□ -0.31
PDE4D-223ENST00000515011 SMR3BP02814 79 aaPredicted RBP13.14□□□□□ -0.31
PDE4D-223ENST00000515011 C1orf64Q8NEQ6 169 aa13.13□□□□□ -0.31
PDE4D-223ENST00000515011 NDUFS5O43920 106 aa13.13□□□□□ -0.31
PDE4D-223ENST00000515011 APOBP04114 4563 aaKnown RBP13.11□□□□□ -0.31
PDE4D-223ENST00000515011 C4orf48Q5BLP8 95 aa13.08□□□□□ -0.31
PDE4D-223ENST00000515011 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
PDE4D-223ENST00000515011 SPINK1P00995 79 aa13.07□□□□□ -0.32
PDE4D-223ENST00000515011 PRR26Q8N8Z3 221 aa13.05□□□□□ -0.32
PDE4D-223ENST00000515011 CYP4F30PQ9H0H9 118 aa13.04□□□□□ -0.32
PDE4D-223ENST00000515011 EPPK1P58107 5090 aaKnown RBP13.03□□□□□ -0.32
PDE4D-223ENST00000515011 LINC00313P59037 77 aa13.03□□□□□ -0.32
PDE4D-223ENST00000515011 SPANXA2-OT1Q8N9U9 137 aa13.02□□□□□ -0.33
PDE4D-223ENST00000515011 LINC00304Q8N9R0 145 aa12.99□□□□□ -0.33
PDE4D-223ENST00000515011 SMIM26A0A096LP01 95 aa12.98□□□□□ -0.33
PDE4D-223ENST00000515011 RPS29P62273 56 aaKnown RBP12.98□□□□□ -0.33
PDE4D-223ENST00000515011 PRR4Q16378 134 aa12.97□□□□□ -0.33
PDE4D-223ENST00000515011 SPAG11AQ6PDA7 123 aa12.96□□□□□ -0.33
PDE4D-223ENST00000515011 KRTAP13-3Q3SY46 172 aa12.95□□□□□ -0.34
PDE4D-223ENST00000515011 FAT1Q14517 4588 aa12.94□□□□□ -0.34
PDE4D-223ENST00000515011 Q8N9P0 234 aaPredicted RBP12.94□□□□□ -0.34
PDE4D-223ENST00000515011 Q5W150 140 aa12.93□□□□□ -0.34
PDE4D-223ENST00000515011 KRTAP16-1A8MUX0 517 aa12.92□□□□□ -0.34
PDE4D-223ENST00000515011 FP248Q71RG6 208 aaPredicted RBP12.9□□□□□ -0.34
PDE4D-223ENST00000515011 LOC101927531A0A1B0GV80 90 aa12.88□□□□□ -0.35
PDE4D-223ENST00000515011 PCOTHQ58A44 107 aa12.88□□□□□ -0.35
PDE4D-223ENST00000515011 IGLV7-46A0A075B6I9 117 aa12.87□□□□□ -0.35
PDE4D-223ENST00000515011 FAM229AH3BQW9 127 aa12.84□□□□□ -0.35
PDE4D-223ENST00000515011 PKHD1L1Q86WI1 4243 aa12.84□□□□□ -0.35
PDE4D-223ENST00000515011 C4orf26Q17RF5 130 aa12.83□□□□□ -0.36
PDE4D-223ENST00000515011 RETNLBQ9BQ08 111 aa12.71□□□□□ -0.37
PDE4D-223ENST00000515011 MPLKIPQ8TAP9 179 aa12.7□□□□□ -0.38
PDE4D-223ENST00000515011 IGKV2-30P06310 120 aa12.68□□□□□ -0.38
PDE4D-223ENST00000515011 Q5VSD8 79 aa12.67□□□□□ -0.38
PDE4D-223ENST00000515011 KIAA1109Q2LD37 5005 aa12.67□□□□□ -0.38
PDE4D-223ENST00000515011 COA5Q86WW8 74 aa12.66□□□□□ -0.38
PDE4D-223ENST00000515011 HSPG2P98160 4391 aa12.65□□□□□ -0.38
PDE4D-223ENST00000515011 Q1T7F1 81 aa12.63□□□□□ -0.39
PDE4D-223ENST00000515011 BIRC6Q9NR09 4857 aa12.59□□□□□ -0.39
PDE4D-223ENST00000515011 HRES1P13985 223 aa12.59□□□□□ -0.39
PDE4D-223ENST00000515011 RYR1P21817 5038 aa12.57□□□□□ -0.4
PDE4D-223ENST00000515011 KRTAP10-8P60410 259 aa12.56□□□□□ -0.4
PDE4D-223ENST00000515011 Q8N1X5 172 aa12.54□□□□□ -0.4
PDE4D-223ENST00000515011 C9orf92A6NGG3 77 aa12.53□□□□□ -0.4
PDE4D-223ENST00000515011 IGKV2D-30A0A075B6S6 120 aa12.52□□□□□ -0.41
PDE4D-223ENST00000515011 C20orf166-AS1Q96NR2 134 aa12.52□□□□□ -0.41
PDE4D-223ENST00000515011 V9GYY9 64 aa12.51□□□□□ -0.41
PDE4D-223ENST00000515011 A8MUU9 505 aa12.5□□□□□ -0.41
PDE4D-223ENST00000515011 FLG2Q5D862 2391 aaPredicted RBP12.5□□□□□ -0.41
PDE4D-223ENST00000515011 DMAC1Q96GE9 116 aa12.5□□□□□ -0.41
PDE4D-223ENST00000515011 KRTAP17-1Q9BYP8 105 aa12.49□□□□□ -0.41
PDE4D-223ENST00000515011 TNXBP22105 4242 aa12.48□□□□□ -0.41
PDE4D-223ENST00000515011 ACYP2P14621 99 aa12.45□□□□□ -0.42
PDE4D-223ENST00000515011 LRP1Q07954 4544 aaKnown RBP12.44□□□□□ -0.42
PDE4D-223ENST00000515011 C7orf65Q6ZTY9 151 aa12.42□□□□□ -0.42
PDE4D-223ENST00000515011 PSPHP1O15172 72 aa12.39□□□□□ -0.43
PDE4D-223ENST00000515011 FAT3Q8TDW7 4589 aa12.38□□□□□ -0.43
PDE4D-223ENST00000515011 A8MUN3 132 aa12.35□□□□□ -0.43
PDE4D-223ENST00000515011 SVIPQ8NHG7 77 aa12.33□□□□□ -0.44
PDE4D-223ENST00000515011 Q75L30 129 aa12.32□□□□□ -0.44
PDE4D-223ENST00000515011 HERC2O95714 4834 aa12.31□□□□□ -0.44
PDE4D-223ENST00000515011 Q5VV11 94 aa12.29□□□□□ -0.44
PDE4D-223ENST00000515011 LINC01558Q9Y6Z2 57 aa12.29□□□□□ -0.44
PDE4D-223ENST00000515011 MT1HL1P0DM35 61 aa12.28□□□□□ -0.44
PDE4D-223ENST00000515011 PRR15LQ9BU68 103 aa12.28□□□□□ -0.44
PDE4D-223ENST00000515011 CHKB-CPT1BH3BT56 60 aa12.28□□□□□ -0.44
PDE4D-223ENST00000515011 KRTAP4-5Q9BYR2 181 aa12.25□□□□□ -0.45
PDE4D-223ENST00000515011 BRK1Q8WUW1 75 aa12.23□□□□□ -0.45
PDE4D-223ENST00000515011 PRO0628Q9UI54 55 aa12.2□□□□□ -0.46
PDE4D-223ENST00000515011 ABCA13Q86UQ4 5058 aa12.2□□□□□ -0.46
PDE4D-223ENST00000515011 SPINK7P58062 85 aa12.16□□□□□ -0.46
PDE4D-223ENST00000515011 MYCBP2O75592 4640 aa12.14□□□□□ -0.47
PDE4D-223ENST00000515011 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
PDE4D-223ENST00000515011 RPL37P61927 97 aaKnown RBP12.11□□□□□ -0.47
PDE4D-223ENST00000515011 XP32Q5T750 250 aa12.09□□□□□ -0.47
PDE4D-223ENST00000515011 ATP11AUNQ6ZP68 121 aa12.09□□□□□ -0.47
PDE4D-223ENST00000515011 PCLOQ9Y6V0 5065 aa12.06□□□□□ -0.48
PDE4D-223ENST00000515011 KRTAP3-1Q9BYR8 98 aa12.02□□□□□ -0.48
PDE4D-223ENST00000515011 A6NED7 52 aa11.99□□□□□ -0.49
PDE4D-223ENST00000515011 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
PDE4D-223ENST00000515011 A0A1B0GU69 56 aa11.94□□□□□ -0.5
PDE4D-223ENST00000515011 A8MU10 97 aa11.89□□□□□ -0.51
PDE4D-223ENST00000515011 SPTSSBQ8NFR3 76 aa11.89□□□□□ -0.51
PDE4D-223ENST00000515011 TPRXLQ17RH7 258 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms