RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 DNAH5Q8TE73 4624 aa10.32□□□□□ -0.76
SNX2-213ENST00000514949 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
SNX2-213ENST00000514949 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
SNX2-213ENST00000514949 ALMS1Q8TCU4 4167 aa10.31□□□□□ -0.76
SNX2-213ENST00000514949 A0A087X002 238 aa10.3□□□□□ -0.76
SNX2-213ENST00000514949 NOTCH2NLQ7Z3S9 236 aa10.3□□□□□ -0.76
SNX2-213ENST00000514949 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
SNX2-213ENST00000514949 NDUFS5O43920 106 aa10.27□□□□□ -0.77
SNX2-213ENST00000514949 PSPHP1O15172 72 aa10.25□□□□□ -0.77
SNX2-213ENST00000514949 LIMD2Q9BT23 127 aa10.25□□□□□ -0.77
SNX2-213ENST00000514949 LY6G6CO95867 125 aa10.25□□□□□ -0.77
SNX2-213ENST00000514949 PCOTHQ58A44 107 aa10.25□□□□□ -0.77
SNX2-213ENST00000514949 COA5Q86WW8 74 aa10.25□□□□□ -0.77
SNX2-213ENST00000514949 CIRBP-AS1Q8TBR5 109 aa10.25□□□□□ -0.77
SNX2-213ENST00000514949 KRTAP13-3Q3SY46 172 aa10.22□□□□□ -0.77
SNX2-213ENST00000514949 A8MUN3 132 aa10.22□□□□□ -0.77
SNX2-213ENST00000514949 KRTAP10-2P60368 255 aa10.22□□□□□ -0.77
SNX2-213ENST00000514949 C8orf87E5RJ46 101 aa10.21□□□□□ -0.77
SNX2-213ENST00000514949 Q6ZSA8 131 aa10.21□□□□□ -0.78
SNX2-213ENST00000514949 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
SNX2-213ENST00000514949 Q5VV11 94 aa10.2□□□□□ -0.78
SNX2-213ENST00000514949 SPINK6Q6UWN8 80 aa10.19□□□□□ -0.78
SNX2-213ENST00000514949 PKD1P98161 4303 aa10.16□□□□□ -0.78
SNX2-213ENST00000514949 LRP1BQ9NZR2 4599 aa10.16□□□□□ -0.78
SNX2-213ENST00000514949 Q5W150 140 aa10.16□□□□□ -0.78
SNX2-213ENST00000514949 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
SNX2-213ENST00000514949 FAT2Q9NYQ8 4349 aa10.13□□□□□ -0.79
SNX2-213ENST00000514949 HRES1P13985 223 aa10.11□□□□□ -0.79
SNX2-213ENST00000514949 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
SNX2-213ENST00000514949 Q75L30 129 aa10.09□□□□□ -0.79
SNX2-213ENST00000514949 PRR15LQ9BU68 103 aa10.09□□□□□ -0.79
SNX2-213ENST00000514949 LINC00313P59037 77 aa10.09□□□□□ -0.79
SNX2-213ENST00000514949 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
SNX2-213ENST00000514949 CHKB-CPT1BH3BT56 60 aa10.06□□□□□ -0.8
SNX2-213ENST00000514949 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
SNX2-213ENST00000514949 FAM229AH3BQW9 127 aa10.04□□□□□ -0.8
SNX2-213ENST00000514949 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
SNX2-213ENST00000514949 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
SNX2-213ENST00000514949 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
SNX2-213ENST00000514949 SPAG11AQ6PDA7 123 aa10□□□□□ -0.81
SNX2-213ENST00000514949 ACYP2P14621 99 aa9.97□□□□□ -0.81
SNX2-213ENST00000514949 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
SNX2-213ENST00000514949 IGKV2-30P06310 120 aa9.95□□□□□ -0.82
SNX2-213ENST00000514949 A8MU10 97 aa9.94□□□□□ -0.82
SNX2-213ENST00000514949 LCA10Q71F78 164 aa9.92□□□□□ -0.82
SNX2-213ENST00000514949 A6NED7 52 aa9.92□□□□□ -0.82
SNX2-213ENST00000514949 SPINK1P00995 79 aa9.9□□□□□ -0.82
SNX2-213ENST00000514949 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
SNX2-213ENST00000514949 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
SNX2-213ENST00000514949 CDC42SE1Q9NRR8 79 aa9.89□□□□□ -0.83
SNX2-213ENST00000514949 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
SNX2-213ENST00000514949 ATP11AUNQ6ZP68 121 aa9.88□□□□□ -0.83
SNX2-213ENST00000514949 TYMSOSQ8TAI1 123 aa9.86□□□□□ -0.83
SNX2-213ENST00000514949 SACSQ9NZJ4 4579 aa9.86□□□□□ -0.83
SNX2-213ENST00000514949 PMAIP1Q13794 54 aa9.85□□□□□ -0.83
SNX2-213ENST00000514949 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
SNX2-213ENST00000514949 RETNLBQ9BQ08 111 aa9.83□□□□□ -0.84
SNX2-213ENST00000514949 PKHD1P08F94 4074 aa9.79□□□□□ -0.84
SNX2-213ENST00000514949 SPINK7P58062 85 aa9.79□□□□□ -0.84
SNX2-213ENST00000514949 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
SNX2-213ENST00000514949 SPTSSBQ8NFR3 76 aa9.74□□□□□ -0.85
SNX2-213ENST00000514949 DYNC1H1Q14204 4646 aaKnown RBP9.74□□□□□ -0.85
SNX2-213ENST00000514949 IGKV2D-30A0A075B6S6 120 aa9.73□□□□□ -0.85
SNX2-213ENST00000514949 A6NN06 94 aa9.71□□□□□ -0.86
SNX2-213ENST00000514949 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
SNX2-213ENST00000514949 APOBP04114 4563 aaKnown RBP9.65□□□□□ -0.86
SNX2-213ENST00000514949 A0A1B0GU69 56 aa9.65□□□□□ -0.86
SNX2-213ENST00000514949 C7orf65Q6ZTY9 151 aa9.65□□□□□ -0.86
SNX2-213ENST00000514949 KTN1-AS1Q86SY8 53 aa9.65□□□□□ -0.86
SNX2-213ENST00000514949 A0A1B0GVY2 172 aa9.62□□□□□ -0.87
SNX2-213ENST00000514949 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
SNX2-213ENST00000514949 FAT1Q14517 4588 aa9.6□□□□□ -0.87
SNX2-213ENST00000514949 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
SNX2-213ENST00000514949 A8MUU9 505 aa9.58□□□□□ -0.88
SNX2-213ENST00000514949 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
SNX2-213ENST00000514949 SPATA8Q6RVD6 105 aa9.56□□□□□ -0.88
SNX2-213ENST00000514949 SEC61GP60059 68 aa9.52□□□□□ -0.89
SNX2-213ENST00000514949 UQCR11O14957 56 aa9.51□□□□□ -0.89
SNX2-213ENST00000514949 Q8N1X5 172 aa9.49□□□□□ -0.89
SNX2-213ENST00000514949 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
SNX2-213ENST00000514949 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
SNX2-213ENST00000514949 RYR2Q92736 4967 aa9.44□□□□□ -0.9
SNX2-213ENST00000514949 KRTAP3-1Q9BYR8 98 aa9.38□□□□□ -0.91
SNX2-213ENST00000514949 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
SNX2-213ENST00000514949 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
SNX2-213ENST00000514949 FAT3Q8TDW7 4589 aa9.33□□□□□ -0.92
SNX2-213ENST00000514949 TNXBP22105 4242 aa9.29□□□□□ -0.92
SNX2-213ENST00000514949 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
SNX2-213ENST00000514949 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
SNX2-213ENST00000514949 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
SNX2-213ENST00000514949 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.94
SNX2-213ENST00000514949 HSPG2P98160 4391 aa9.19□□□□□ -0.94
SNX2-213ENST00000514949 H0YAA0 97 aa9.18□□□□□ -0.94
SNX2-213ENST00000514949 A0A1B0GU33 70 aa9.15□□□□□ -0.94
SNX2-213ENST00000514949 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
SNX2-213ENST00000514949 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
SNX2-213ENST00000514949 PRAC1Q96KF2 57 aa9.13□□□□□ -0.95
SNX2-213ENST00000514949 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
SNX2-213ENST00000514949 Q5VSD8 79 aa9.11□□□□□ -0.95
SNX2-213ENST00000514949 RYR3Q15413 4870 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms