RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 OBSCN-AS1Q96MR7 158 aa7.7□□□□□ -1.18
SGCA-211ENST00000514934 PDE6GP18545 87 aa7.69□□□□□ -1.18
SGCA-211ENST00000514934 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
SGCA-211ENST00000514934 Q96NJ1 140 aa7.68□□□□□ -1.18
SGCA-211ENST00000514934 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
SGCA-211ENST00000514934 A0A1B0GV72 72 aa7.66□□□□□ -1.18
SGCA-211ENST00000514934 NDUFV3P56181 108 aaKnown RBP7.66□□□□□ -1.18
SGCA-211ENST00000514934 Q75L30 129 aa7.66□□□□□ -1.18
SGCA-211ENST00000514934 A0A1W2PNM2 257 aa7.62□□□□□ -1.19
SGCA-211ENST00000514934 RBM3P98179 157 aaKnown RBP7.62□□□□□ -1.19
SGCA-211ENST00000514934 A0A1B0GW54 56 aa7.61□□□□□ -1.19
SGCA-211ENST00000514934 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
SGCA-211ENST00000514934 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
SGCA-211ENST00000514934 LINC00643Q86TS7 51 aa7.6□□□□□ -1.19
SGCA-211ENST00000514934 IMUPQ9GZP8 106 aa7.6□□□□□ -1.19
SGCA-211ENST00000514934 A0A087WSZ3 146 aa7.59□□□□□ -1.19
SGCA-211ENST00000514934 A8MUU9 505 aa7.59□□□□□ -1.19
SGCA-211ENST00000514934 DSCR8Q96T75 97 aa7.58□□□□□ -1.2
SGCA-211ENST00000514934 SS18L2Q9UHA2 77 aa7.58□□□□□ -1.2
SGCA-211ENST00000514934 CCKP06307 115 aa7.57□□□□□ -1.2
SGCA-211ENST00000514934 TRBV7-4A0A0J9YYF1 115 aa7.54□□□□□ -1.2
SGCA-211ENST00000514934 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
SGCA-211ENST00000514934 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
SGCA-211ENST00000514934 ANAPC13Q9BS18 74 aa7.53□□□□□ -1.2
SGCA-211ENST00000514934 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
SGCA-211ENST00000514934 Q6ZQT0 140 aa7.52□□□□□ -1.21
SGCA-211ENST00000514934 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
SGCA-211ENST00000514934 DSCR10P59022 87 aa7.5□□□□□ -1.21
SGCA-211ENST00000514934 NOTCH2NLQ7Z3S9 236 aa7.49□□□□□ -1.21
SGCA-211ENST00000514934 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
SGCA-211ENST00000514934 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
SGCA-211ENST00000514934 M0R2T5 61 aa7.46□□□□□ -1.22
SGCA-211ENST00000514934 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.22
SGCA-211ENST00000514934 UBL5Q9BZL1 73 aa7.46□□□□□ -1.22
SGCA-211ENST00000514934 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
SGCA-211ENST00000514934 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.43□□□□□ -1.22
SGCA-211ENST00000514934 IGKV4-1P06312 121 aa7.43□□□□□ -1.22
SGCA-211ENST00000514934 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
SGCA-211ENST00000514934 MPLKIPQ8TAP9 179 aa7.42□□□□□ -1.22
SGCA-211ENST00000514934 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
SGCA-211ENST00000514934 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
SGCA-211ENST00000514934 DEFB116Q30KQ4 102 aa7.41□□□□□ -1.22
SGCA-211ENST00000514934 LINC00313P59037 77 aa7.4□□□□□ -1.22
SGCA-211ENST00000514934 ATOX1O00244 68 aa7.39□□□□□ -1.23
SGCA-211ENST00000514934 HRES1P13985 223 aa7.38□□□□□ -1.23
SGCA-211ENST00000514934 USH2AO75445 5202 aa7.37□□□□□ -1.23
SGCA-211ENST00000514934 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
SGCA-211ENST00000514934 CXCL6P80162 114 aa7.37□□□□□ -1.23
SGCA-211ENST00000514934 IGKV3D-7A0A0C4DH55 119 aa7.36□□□□□ -1.23
SGCA-211ENST00000514934 NREPQ16612 68 aa7.35□□□□□ -1.23
SGCA-211ENST00000514934 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
SGCA-211ENST00000514934 Q6ZVQ6 151 aa7.34□□□□□ -1.23
SGCA-211ENST00000514934 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
SGCA-211ENST00000514934 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
SGCA-211ENST00000514934 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
SGCA-211ENST00000514934 UQCRQO14949 82 aa7.33□□□□□ -1.24
SGCA-211ENST00000514934 COX7CP15954 63 aa7.3□□□□□ -1.24
SGCA-211ENST00000514934 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
SGCA-211ENST00000514934 MT2AP02795 61 aa7.29□□□□□ -1.24
SGCA-211ENST00000514934 SERP2Q8N6R1 65 aa7.27□□□□□ -1.25
SGCA-211ENST00000514934 BPY2O14599 106 aa7.26□□□□□ -1.25
SGCA-211ENST00000514934 J3KT08 172 aa7.25□□□□□ -1.25
SGCA-211ENST00000514934 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
SGCA-211ENST00000514934 Q8N9P0 234 aaPredicted RBP7.25□□□□□ -1.25
SGCA-211ENST00000514934 A0A087WVE0 104 aa7.24□□□□□ -1.25
SGCA-211ENST00000514934 MT1FP04733 61 aa7.24□□□□□ -1.25
SGCA-211ENST00000514934 ZCCHC13Q8WW36 166 aaKnown RBP7.23□□□□□ -1.25
SGCA-211ENST00000514934 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
SGCA-211ENST00000514934 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
SGCA-211ENST00000514934 A8MWP4 228 aa7.19□□□□□ -1.26
SGCA-211ENST00000514934 LCE2BO14633 110 aa7.19□□□□□ -1.26
SGCA-211ENST00000514934 FAM236DA0A1B0GTK5 79 aa7.18□□□□□ -1.26
SGCA-211ENST00000514934 FAM236CP0DP71 79 aa7.18□□□□□ -1.26
SGCA-211ENST00000514934 C8orf17Q9NRJ1 99 aa7.18□□□□□ -1.26
SGCA-211ENST00000514934 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
SGCA-211ENST00000514934 TRAV7A0A075B6U4 112 aa7.17□□□□□ -1.26
SGCA-211ENST00000514934 SPINK7P58062 85 aa7.17□□□□□ -1.26
SGCA-211ENST00000514934 NDUFB1O75438 58 aa7.14□□□□□ -1.27
SGCA-211ENST00000514934 TMEM258P61165 79 aa7.13□□□□□ -1.27
SGCA-211ENST00000514934 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
SGCA-211ENST00000514934 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
SGCA-211ENST00000514934 MACF1Q9UPN3 7388 aaKnown RBP7.07□□□□□ -1.28
SGCA-211ENST00000514934 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
SGCA-211ENST00000514934 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
SGCA-211ENST00000514934 K7EQZ3 153 aa7.06□□□□□ -1.28
SGCA-211ENST00000514934 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
SGCA-211ENST00000514934 SYNE2Q8WXH0 6885 aaKnown RBP7.06□□□□□ -1.28
SGCA-211ENST00000514934 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
SGCA-211ENST00000514934 NDUFC1O43677 76 aa7.05□□□□□ -1.28
SGCA-211ENST00000514934 RPS28P62857 69 aaKnown RBP7.05□□□□□ -1.28
SGCA-211ENST00000514934 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
SGCA-211ENST00000514934 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
SGCA-211ENST00000514934 KRTAP19-1Q8IUB9 90 aa7.04□□□□□ -1.28
SGCA-211ENST00000514934 MRPL34Q9BQ48 92 aaKnown RBP7.04□□□□□ -1.28
SGCA-211ENST00000514934 Q8N9L7 120 aa7.02□□□□□ -1.29
SGCA-211ENST00000514934 Q5W150 140 aa7□□□□□ -1.29
SGCA-211ENST00000514934 OCR1Q9BZK8 76 aa7□□□□□ -1.29
SGCA-211ENST00000514934 CYSTM1Q9H1C7 97 aa7□□□□□ -1.29
SGCA-211ENST00000514934 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
SGCA-211ENST00000514934 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms