RNA–Protein interactions for RNA: ENST00000514806.5

SLC38A9-221, Transcript of solute carrier family 38 member 9, humanhuman

TSL 2

Gene SLC38A9, Length 760 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-221ENST00000514806 NBASA2RRP1 2371 aa0.63□□□□□ -2.31
SLC38A9-221ENST00000514806 PKD1L1Q8TDX9 2849 aa0.63□□□□□ -2.31
SLC38A9-221ENST00000514806 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
SLC38A9-221ENST00000514806 WNK1Q9H4A3 2382 aa0.62□□□□□ -2.31
SLC38A9-221ENST00000514806 NAV2Q8IVL1 2488 aa0.61□□□□□ -2.31
SLC38A9-221ENST00000514806 H3BNG1 76 aa0.61□□□□□ -2.31
SLC38A9-221ENST00000514806 CLPSL2Q6UWE3 100 aa0.6□□□□□ -2.31
SLC38A9-221ENST00000514806 SETXQ7Z333 2677 aaKnown RBP0.58□□□□□ -2.32
SLC38A9-221ENST00000514806 TNRC18O15417 2968 aaPredicted RBP0.57□□□□□ -2.32
SLC38A9-221ENST00000514806 SPRR2AP35326 72 aa0.57□□□□□ -2.32
SLC38A9-221ENST00000514806 CELSR1Q9NYQ6 3014 aa0.57□□□□□ -2.32
SLC38A9-221ENST00000514806 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
SLC38A9-221ENST00000514806 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
SLC38A9-221ENST00000514806 RPL39P62891 51 aaKnown RBP0.56□□□□□ -2.32
SLC38A9-221ENST00000514806 SETD2Q9BYW2 2564 aaPredicted RBP0.56□□□□□ -2.32
SLC38A9-221ENST00000514806 ACACAQ13085 2346 aa0.56□□□□□ -2.32
SLC38A9-221ENST00000514806 UBR5O95071 2799 aaPredicted RBP0.56□□□□□ -2.32
SLC38A9-221ENST00000514806 MTORP42345 2549 aa0.55□□□□□ -2.32
SLC38A9-221ENST00000514806 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
SLC38A9-221ENST00000514806 CACNA1AO00555 2505 aa0.55□□□□□ -2.32
SLC38A9-221ENST00000514806 IGSF10Q6WRI0 2623 aa0.54□□□□□ -2.32
SLC38A9-221ENST00000514806 FLNBO75369 2602 aaKnown RBP0.54□□□□□ -2.32
SLC38A9-221ENST00000514806 LPAP08519 4548 aa0.54□□□□□ -2.32
SLC38A9-221ENST00000514806 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
SLC38A9-221ENST00000514806 SPTBN4Q9H254 2564 aa0.53□□□□□ -2.32
SLC38A9-221ENST00000514806 KMT2AQ03164 3969 aa0.53□□□□□ -2.33
SLC38A9-221ENST00000514806 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
SLC38A9-221ENST00000514806 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
SLC38A9-221ENST00000514806 VPS13BQ7Z7G8 4022 aa0.52□□□□□ -2.33
SLC38A9-221ENST00000514806 FLNCQ14315 2725 aa0.51□□□□□ -2.33
SLC38A9-221ENST00000514806 DEFB110Q30KQ9 67 aa0.51□□□□□ -2.33
SLC38A9-221ENST00000514806 LYSTQ99698 3801 aa0.51□□□□□ -2.33
SLC38A9-221ENST00000514806 NF1P21359 2839 aa0.51□□□□□ -2.33
SLC38A9-221ENST00000514806 NSD1Q96L73 2696 aaPredicted RBP0.51□□□□□ -2.33
SLC38A9-221ENST00000514806 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
SLC38A9-221ENST00000514806 MT1AP04731 61 aa0.5□□□□□ -2.33
SLC38A9-221ENST00000514806 RPL39LQ96EH5 51 aaKnown RBP0.5□□□□□ -2.33
SLC38A9-221ENST00000514806 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
SLC38A9-221ENST00000514806 COL6A5A8TX70 2615 aa0.49□□□□□ -2.33
SLC38A9-221ENST00000514806 FAM186AA6NE01 2351 aa0.48□□□□□ -2.33
SLC38A9-221ENST00000514806 TOMM7Q9P0U1 55 aa0.48□□□□□ -2.33
SLC38A9-221ENST00000514806 GCN1Q92616 2671 aaKnown RBP0.48□□□□□ -2.33
SLC38A9-221ENST00000514806 EPG5Q9HCE0 2579 aa0.48□□□□□ -2.33
SLC38A9-221ENST00000514806 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
SLC38A9-221ENST00000514806 LINC01590Q5TEZ4 76 aa0.47□□□□□ -2.33
SLC38A9-221ENST00000514806 STAB1Q9NY15 2570 aa0.47□□□□□ -2.33
SLC38A9-221ENST00000514806 RIF1Q5UIP0 2472 aaKnown RBP0.46□□□□□ -2.34
SLC38A9-221ENST00000514806 DNAH3Q8TD57 4116 aa0.46□□□□□ -2.34
SLC38A9-221ENST00000514806 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
SLC38A9-221ENST00000514806 ZZEF1O43149 2961 aa0.46□□□□□ -2.34
SLC38A9-221ENST00000514806 ANKRD11Q6UB99 2663 aaPredicted RBP0.46□□□□□ -2.34
SLC38A9-221ENST00000514806 LRRK2Q5S007 2527 aa0.45□□□□□ -2.34
SLC38A9-221ENST00000514806 SPART-AS1P0CW21 52 aa0.45□□□□□ -2.34
SLC38A9-221ENST00000514806 ARHGAP5-AS1Q96IT6 56 aa0.45□□□□□ -2.34
SLC38A9-221ENST00000514806 SPG11Q96JI7 2443 aa0.45□□□□□ -2.34
SLC38A9-221ENST00000514806 DMBT1Q9UGM3 2413 aaPredicted RBP0.44□□□□□ -2.34
SLC38A9-221ENST00000514806 SPRR2EP22531 72 aa0.44□□□□□ -2.34
SLC38A9-221ENST00000514806 ANKHD1Q8IWZ3 2542 aaKnown RBP0.44□□□□□ -2.34
SLC38A9-221ENST00000514806 TEP1Q99973 2627 aaKnown RBP0.44□□□□□ -2.34
SLC38A9-221ENST00000514806 HECTD4Q9Y4D8 3996 aa0.43□□□□□ -2.34
SLC38A9-221ENST00000514806 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
SLC38A9-221ENST00000514806 MAST4O15021 2626 aa0.43□□□□□ -2.34
SLC38A9-221ENST00000514806 CUBNO60494 3623 aa0.43□□□□□ -2.34
SLC38A9-221ENST00000514806 TGP01266 2768 aa0.42□□□□□ -2.34
SLC38A9-221ENST00000514806 FLNAP21333 2647 aaKnown RBP0.42□□□□□ -2.34
SLC38A9-221ENST00000514806 ACACBO00763 2458 aa0.42□□□□□ -2.34
SLC38A9-221ENST00000514806 PDZD2O15018 2839 aa0.42□□□□□ -2.34
SLC38A9-221ENST00000514806 PKD1P98161 4303 aa0.41□□□□□ -2.34
SLC38A9-221ENST00000514806 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
SLC38A9-221ENST00000514806 DCHS2Q6V1P9 2916 aa0.41□□□□□ -2.34
SLC38A9-221ENST00000514806 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.34
SLC38A9-221ENST00000514806 COL6A3P12111 3177 aa0.4□□□□□ -2.35
SLC38A9-221ENST00000514806 SPRR2FQ96RM1 72 aa0.4□□□□□ -2.35
SLC38A9-221ENST00000514806 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
SLC38A9-221ENST00000514806 ZANQ9Y493 2812 aa0.39□□□□□ -2.35
SLC38A9-221ENST00000514806 TACC2O95359 2948 aa0.39□□□□□ -2.35
SLC38A9-221ENST00000514806 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 PRCDQ00LT1 54 aa0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 LEAP2Q969E1 77 aa0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 COL7A1Q02388 2944 aa0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 NBEAL2Q6ZNJ1 2754 aa0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 RANBP2P49792 3224 aaKnown RBP0.38□□□□□ -2.35
SLC38A9-221ENST00000514806 SPENQ96T58 3664 aaKnown RBP0.37□□□□□ -2.35
SLC38A9-221ENST00000514806 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
SLC38A9-221ENST00000514806 UTP20O75691 2785 aaKnown RBP0.37□□□□□ -2.35
SLC38A9-221ENST00000514806 HSPG2P98160 4391 aa0.36□□□□□ -2.35
SLC38A9-221ENST00000514806 DNAH11Q96DT5 4516 aa0.36□□□□□ -2.35
SLC38A9-221ENST00000514806 PKHD1L1Q86WI1 4243 aa0.36□□□□□ -2.35
SLC38A9-221ENST00000514806 TLN2Q9Y4G6 2542 aa0.35□□□□□ -2.35
SLC38A9-221ENST00000514806 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
SLC38A9-221ENST00000514806 PKHD1P08F94 4074 aa0.35□□□□□ -2.35
SLC38A9-221ENST00000514806 DMXL1Q9Y485 3027 aa0.35□□□□□ -2.35
SLC38A9-221ENST00000514806 NBEAQ8NFP9 2946 aa0.34□□□□□ -2.36
SLC38A9-221ENST00000514806 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
SLC38A9-221ENST00000514806 STAB2Q8WWQ8 2551 aa0.33□□□□□ -2.36
SLC38A9-221ENST00000514806 LAMA5O15230 3695 aa0.33□□□□□ -2.36
SLC38A9-221ENST00000514806 COL12A1Q99715 3063 aa0.33□□□□□ -2.36
SLC38A9-221ENST00000514806 USP9YO00507 2555 aaPredicted RBP0.32□□□□□ -2.36
SLC38A9-221ENST00000514806 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms