RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 TMEM256-PLSCR3K7ERE1 68 aa5.91□□□□□ -1.46
UBE2D3-232ENST00000514755 M0R143 59 aa5.91□□□□□ -1.46
UBE2D3-232ENST00000514755 TRACP01848 142 aa5.91□□□□□ -1.46
UBE2D3-232ENST00000514755 Q96NJ1 140 aa5.9□□□□□ -1.46
UBE2D3-232ENST00000514755 RPL37P61927 97 aaKnown RBP5.89□□□□□ -1.47
UBE2D3-232ENST00000514755 ANKRD29Q8N6D5 301 aa5.89□□□□□ -1.47
UBE2D3-232ENST00000514755 UBE2V1Q13404 147 aa5.88□□□□□ -1.47
UBE2D3-232ENST00000514755 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
UBE2D3-232ENST00000514755 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
UBE2D3-232ENST00000514755 H3BQ85 93 aa5.87□□□□□ -1.47
UBE2D3-232ENST00000514755 OBSCN-AS1Q96MR7 158 aa5.87□□□□□ -1.47
UBE2D3-232ENST00000514755 BATFQ16520 125 aa5.86□□□□□ -1.47
UBE2D3-232ENST00000514755 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
UBE2D3-232ENST00000514755 CCKP06307 115 aa5.85□□□□□ -1.47
UBE2D3-232ENST00000514755 BAALC-AS2P0C853 105 aa5.85□□□□□ -1.47
UBE2D3-232ENST00000514755 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
UBE2D3-232ENST00000514755 RBM3P98179 157 aaKnown RBP5.83□□□□□ -1.48
UBE2D3-232ENST00000514755 ATXN8Q156A1 80 aa5.83□□□□□ -1.48
UBE2D3-232ENST00000514755 DEFB116Q30KQ4 102 aa5.83□□□□□ -1.48
UBE2D3-232ENST00000514755 VPS25Q9BRG1 176 aa5.82□□□□□ -1.48
UBE2D3-232ENST00000514755 DSCR10P59022 87 aa5.81□□□□□ -1.48
UBE2D3-232ENST00000514755 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
UBE2D3-232ENST00000514755 IGKV4-1P06312 121 aa5.8□□□□□ -1.48
UBE2D3-232ENST00000514755 Q75L30 129 aa5.8□□□□□ -1.48
UBE2D3-232ENST00000514755 DSCR8Q96T75 97 aa5.8□□□□□ -1.48
UBE2D3-232ENST00000514755 SIGMAR1Q99720 223 aa5.8□□□□□ -1.48
UBE2D3-232ENST00000514755 TAX1BP3O14907 124 aa5.79□□□□□ -1.48
UBE2D3-232ENST00000514755 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
UBE2D3-232ENST00000514755 C9JAW5 83 aa5.77□□□□□ -1.49
UBE2D3-232ENST00000514755 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
UBE2D3-232ENST00000514755 A8MUU9 505 aa5.76□□□□□ -1.49
UBE2D3-232ENST00000514755 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
UBE2D3-232ENST00000514755 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
UBE2D3-232ENST00000514755 Q6ZQT0 140 aa5.76□□□□□ -1.49
UBE2D3-232ENST00000514755 TRBV20-1A0A075B6N2 111 aa5.75□□□□□ -1.49
UBE2D3-232ENST00000514755 JMJD7-PLA2G4BH0Y9G9 81 aa5.75□□□□□ -1.49
UBE2D3-232ENST00000514755 LYRM7Q5U5X0 104 aa5.75□□□□□ -1.49
UBE2D3-232ENST00000514755 MTURNQ8N3F0 131 aa5.75□□□□□ -1.49
UBE2D3-232ENST00000514755 A0A1W2PPM0 123 aa5.74□□□□□ -1.49
UBE2D3-232ENST00000514755 LINC00313P59037 77 aa5.74□□□□□ -1.49
UBE2D3-232ENST00000514755 MT1HP80294 61 aa5.74□□□□□ -1.49
UBE2D3-232ENST00000514755 C14orf132Q9NPU4 83 aa5.74□□□□□ -1.49
UBE2D3-232ENST00000514755 LOC110117498A0A087WWA1 95 aa5.73□□□□□ -1.49
UBE2D3-232ENST00000514755 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
UBE2D3-232ENST00000514755 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
UBE2D3-232ENST00000514755 H3BT86 120 aa5.68□□□□□ -1.5
UBE2D3-232ENST00000514755 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
UBE2D3-232ENST00000514755 PDE6GP18545 87 aa5.67□□□□□ -1.5
UBE2D3-232ENST00000514755 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
UBE2D3-232ENST00000514755 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
UBE2D3-232ENST00000514755 COX6B2Q6YFQ2 88 aa5.66□□□□□ -1.5
UBE2D3-232ENST00000514755 A0A1B0GW54 56 aa5.65□□□□□ -1.5
UBE2D3-232ENST00000514755 J3KT08 172 aa5.65□□□□□ -1.5
UBE2D3-232ENST00000514755 IGKV3D-7A0A0C4DH55 119 aa5.64□□□□□ -1.51
UBE2D3-232ENST00000514755 A8MWP4 228 aa5.63□□□□□ -1.51
UBE2D3-232ENST00000514755 COL5A1-AS1Q5SY13 56 aa5.63□□□□□ -1.51
UBE2D3-232ENST00000514755 NREPQ16612 68 aa5.62□□□□□ -1.51
UBE2D3-232ENST00000514755 PCP4L1A6NKN8 68 aa5.61□□□□□ -1.51
UBE2D3-232ENST00000514755 NDUFB1O75438 58 aa5.61□□□□□ -1.51
UBE2D3-232ENST00000514755 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
UBE2D3-232ENST00000514755 PRO0461Q9UI25 63 aa5.61□□□□□ -1.51
UBE2D3-232ENST00000514755 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
UBE2D3-232ENST00000514755 K7EP34 96 aa5.59□□□□□ -1.51
UBE2D3-232ENST00000514755 M0R2T5 61 aa5.59□□□□□ -1.51
UBE2D3-232ENST00000514755 HRES1P13985 223 aa5.58□□□□□ -1.52
UBE2D3-232ENST00000514755 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
UBE2D3-232ENST00000514755 K7EQZ3 153 aa5.57□□□□□ -1.52
UBE2D3-232ENST00000514755 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
UBE2D3-232ENST00000514755 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
UBE2D3-232ENST00000514755 Q6ZVQ6 151 aa5.55□□□□□ -1.52
UBE2D3-232ENST00000514755 BPY2O14599 106 aa5.53□□□□□ -1.52
UBE2D3-232ENST00000514755 Q8N9L7 120 aa5.52□□□□□ -1.53
UBE2D3-232ENST00000514755 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
UBE2D3-232ENST00000514755 SPINK7P58062 85 aa5.51□□□□□ -1.53
UBE2D3-232ENST00000514755 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
UBE2D3-232ENST00000514755 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
UBE2D3-232ENST00000514755 LINC00846Q9NV44 126 aa5.51□□□□□ -1.53
UBE2D3-232ENST00000514755 FAM236DA0A1B0GTK5 79 aa5.5□□□□□ -1.53
UBE2D3-232ENST00000514755 hDV103S1A0JD37 113 aa5.5□□□□□ -1.53
UBE2D3-232ENST00000514755 FAM236CP0DP71 79 aa5.5□□□□□ -1.53
UBE2D3-232ENST00000514755 MT3P25713 68 aa5.49□□□□□ -1.53
UBE2D3-232ENST00000514755 GTF2H5Q6ZYL4 71 aa5.49□□□□□ -1.53
UBE2D3-232ENST00000514755 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
UBE2D3-232ENST00000514755 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
UBE2D3-232ENST00000514755 F8W1H4 67 aa5.46□□□□□ -1.54
UBE2D3-232ENST00000514755 NDUFS5O43920 106 aa5.46□□□□□ -1.54
UBE2D3-232ENST00000514755 ETDBQ3ZM63 59 aa5.46□□□□□ -1.54
UBE2D3-232ENST00000514755 Q5W150 140 aa5.44□□□□□ -1.54
UBE2D3-232ENST00000514755 UBL5Q9BZL1 73 aa5.44□□□□□ -1.54
UBE2D3-232ENST00000514755 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
UBE2D3-232ENST00000514755 FSIP2Q5CZC0 6907 aa5.42□□□□□ -1.54
UBE2D3-232ENST00000514755 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
UBE2D3-232ENST00000514755 MT2AP02795 61 aa5.37□□□□□ -1.55
UBE2D3-232ENST00000514755 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
UBE2D3-232ENST00000514755 MT1FP04733 61 aa5.35□□□□□ -1.55
UBE2D3-232ENST00000514755 CXCL6P80162 114 aa5.34□□□□□ -1.55
UBE2D3-232ENST00000514755 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
UBE2D3-232ENST00000514755 A0A1B0GV90 55 aa5.32□□□□□ -1.56
UBE2D3-232ENST00000514755 H1FX-AS1Q4G0G2 97 aa5.29□□□□□ -1.56
UBE2D3-232ENST00000514755 USH2AO75445 5202 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms