RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 H0YAA0 97 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 IFI27P40305 119 aaPredicted RBP-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 DEFB1P60022 68 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 CCDC88BA6NC98 1476 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 MAGI3Q5TCQ9 1506 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 NESP48681 1621 aa-0.5□□□□□ -2.49
TRAPPC11-210ENST00000513600 UMAD1C9J7I0 102 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 DEPDC5O75140 1603 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 MT1GP13640 62 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 KIF14Q15058 1648 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 TDRG1Q3Y452 100 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 CSMD2Q7Z408 3487 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 DNAH17Q9UFH2 4485 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 MAP3K4Q9Y6R4 1608 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 DMDP11532 3685 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 CRYBG3Q68DQ2 2970 aa-0.51□□□□□ -2.49
TRAPPC11-210ENST00000513600 DIP2BQ9P265 1576 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 UACAQ9BZF9 1416 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 LYNX1G3V0Z9 82 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 MT1EP04732 61 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 IFI6P09912 130 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 HMGA1P17096 107 aaKnown RBP-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 KRTAP8-1Q8IUC2 63 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 MT1LQ93083 61 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 ARFGEF2Q9Y6D5 1785 aa-0.52□□□□□ -2.49
TRAPPC11-210ENST00000513600 ZNF831Q5JPB2 1677 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 ANKRD50Q9ULJ7 1429 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 SMR3BP02814 79 aaPredicted RBP-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 MT1FP04733 61 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 PRLHP81277 87 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 ATP5EP2Q5VTU8 51 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 SCN11AQ9UI33 1791 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 DNAH10Q8IVF4 4471 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 DCHS1Q96JQ0 3298 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 FREM2Q5SZK8 3169 aa-0.53□□□□□ -2.49
TRAPPC11-210ENST00000513600 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 NDUFA4O00483 81 aa-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 DEFB121Q5J5C9 76 aa-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 PIK3C2BO00750 1634 aa-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 TRIOO75962 3097 aa-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 MAP3K1Q13233 1512 aa-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.54□□□□□ -2.5
TRAPPC11-210ENST00000513600 DNAH8Q96JB1 4490 aa-0.55□□□□□ -2.5
TRAPPC11-210ENST00000513600 DEFB130BP0DP73 79 aa-0.55□□□□□ -2.5
TRAPPC11-210ENST00000513600 DEFB130AP0DP74 79 aa-0.55□□□□□ -2.5
TRAPPC11-210ENST00000513600 NREPQ16612 68 aa-0.55□□□□□ -2.5
TRAPPC11-210ENST00000513600 ST20Q9HBF5 79 aa-0.55□□□□□ -2.5
TRAPPC11-210ENST00000513600 DEFB131BA0A096LNP1 70 aa-0.56□□□□□ -2.5
TRAPPC11-210ENST00000513600 GNG2P59768 71 aa-0.56□□□□□ -2.5
TRAPPC11-210ENST00000513600 KRTAP19-5Q3LI72 72 aa-0.56□□□□□ -2.5
TRAPPC11-210ENST00000513600 CDC42BPGQ6DT37 1551 aa-0.57□□□□□ -2.5
TRAPPC11-210ENST00000513600 SPEGQ15772 3267 aa-0.57□□□□□ -2.5
TRAPPC11-210ENST00000513600 IAPPP10997 89 aa-0.57□□□□□ -2.5
TRAPPC11-210ENST00000513600 ADIRFQ15847 76 aa-0.57□□□□□ -2.5
TRAPPC11-210ENST00000513600 EP400Q96L91 3159 aa-0.57□□□□□ -2.5
TRAPPC11-210ENST00000513600 DDX60LQ5H9U9 1706 aaKnown RBP-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 MGAQ8IWI9 3026 aa-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 A0A087WXM4 84 aa-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 SMIM13P0DJ93 91 aa-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 RPS29P62273 56 aaKnown RBP-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 S100A13Q99584 98 aa-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 S4R3F8 94 aa-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 CEP350Q5VT06 3117 aa-0.58□□□□□ -2.5
TRAPPC11-210ENST00000513600 RANBP2P49792 3224 aaKnown RBP-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 DNAH14Q0VDD8 3507 aa-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 MRPL33O75394 65 aaKnown RBP-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 FRYLO94915 3013 aa-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 THOC2Q8NI27 1593 aaKnown RBP-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 WDFY3Q8IZQ1 3526 aa-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 PLCH1Q4KWH8 1693 aa-0.59□□□□□ -2.5
TRAPPC11-210ENST00000513600 MED14O60244 1454 aa-0.6□□□□□ -2.5
TRAPPC11-210ENST00000513600 H3BUT2 72 aa-0.6□□□□□ -2.51
TRAPPC11-210ENST00000513600 DEFB110Q30KQ9 67 aa-0.6□□□□□ -2.51
TRAPPC11-210ENST00000513600 CLPSL2Q6UWE3 100 aa-0.6□□□□□ -2.51
TRAPPC11-210ENST00000513600 KCNQ1DNQ9H478 68 aa-0.6□□□□□ -2.51
TRAPPC11-210ENST00000513600 ABCC1P33527 1531 aa-0.6□□□□□ -2.51
TRAPPC11-210ENST00000513600 CFAP43Q8NDM7 1665 aa-0.61□□□□□ -2.51
TRAPPC11-210ENST00000513600 CFAP54Q96N23 3096 aa-0.61□□□□□ -2.51
TRAPPC11-210ENST00000513600 DEFB4AO15263 64 aa-0.61□□□□□ -2.51
TRAPPC11-210ENST00000513600 DEFB106AQ8N104 65 aa-0.61□□□□□ -2.51
TRAPPC11-210ENST00000513600 KDM5DQ9BY66 1539 aa-0.61□□□□□ -2.51
TRAPPC11-210ENST00000513600 ITSN1Q15811 1721 aa-0.61□□□□□ -2.51
TRAPPC11-210ENST00000513600 RB1CC1Q8TDY2 1594 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 LOC400499M0QZD8 3231 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 USP34Q70CQ2 3546 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 DCAF1Q9Y4B6 1507 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 BVES-AS1Q5T3Y7 98 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 UBL5Q9BZL1 73 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 RICTORQ6R327 1708 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 RALGAPBQ86X10 1494 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 ARHGAP35Q9NRY4 1499 aa-0.62□□□□□ -2.51
TRAPPC11-210ENST00000513600 HFM1A2PYH4 1435 aa-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 WDFY4Q6ZS81 3184 aa-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 CEP250Q9BV73 2442 aa-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 ERVK-7P63135 1459 aa-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 CD163L1Q9NR16 1453 aa-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 ZC3H13Q5T200 1668 aaKnown RBP-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 MUC3AQ02505 3323 aa-0.63□□□□□ -2.51
TRAPPC11-210ENST00000513600 TJP1Q07157 1748 aa-0.64□□□□□ -2.51
TRAPPC11-210ENST00000513600 MKI67P46013 3256 aaKnown RBP-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms