RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 TRBV7-4A0A0J9YYF1 115 aa6.66□□□□□ -1.34
POLR2J3-217ENST00000513438 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
POLR2J3-217ENST00000513438 LCE2BO14633 110 aa6.65□□□□□ -1.34
POLR2J3-217ENST00000513438 TRIAP1O43715 76 aa6.65□□□□□ -1.34
POLR2J3-217ENST00000513438 MT1FP04733 61 aa6.65□□□□□ -1.34
POLR2J3-217ENST00000513438 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
POLR2J3-217ENST00000513438 GTF2H5Q6ZYL4 71 aa6.64□□□□□ -1.35
POLR2J3-217ENST00000513438 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
POLR2J3-217ENST00000513438 FXYD2P54710 66 aa6.63□□□□□ -1.35
POLR2J3-217ENST00000513438 KRTAP9-3Q9BYQ3 159 aa6.63□□□□□ -1.35
POLR2J3-217ENST00000513438 ORMDL1Q9P0S3 153 aa6.63□□□□□ -1.35
POLR2J3-217ENST00000513438 IGHV6-1A0A0B4J1U7 121 aa6.62□□□□□ -1.35
POLR2J3-217ENST00000513438 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
POLR2J3-217ENST00000513438 DNAL4O96015 105 aa6.62□□□□□ -1.35
POLR2J3-217ENST00000513438 H3BQ85 93 aa6.61□□□□□ -1.35
POLR2J3-217ENST00000513438 TMEM256-PLSCR3K7ERE1 68 aa6.6□□□□□ -1.35
POLR2J3-217ENST00000513438 TRACP01848 142 aa6.6□□□□□ -1.35
POLR2J3-217ENST00000513438 CCKP06307 115 aa6.6□□□□□ -1.35
POLR2J3-217ENST00000513438 PSMB2P49721 201 aa6.59□□□□□ -1.35
POLR2J3-217ENST00000513438 J3QR89 54 aa6.56□□□□□ -1.36
POLR2J3-217ENST00000513438 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
POLR2J3-217ENST00000513438 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
POLR2J3-217ENST00000513438 K7EP34 96 aa6.55□□□□□ -1.36
POLR2J3-217ENST00000513438 COX6CP09669 75 aa6.55□□□□□ -1.36
POLR2J3-217ENST00000513438 A0A1B0GVX0 72 aa6.54□□□□□ -1.36
POLR2J3-217ENST00000513438 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
POLR2J3-217ENST00000513438 K7ERJ3 54 aa6.54□□□□□ -1.36
POLR2J3-217ENST00000513438 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
POLR2J3-217ENST00000513438 SPINK7P58062 85 aa6.52□□□□□ -1.37
POLR2J3-217ENST00000513438 HSD52Q0P140 79 aa6.52□□□□□ -1.37
POLR2J3-217ENST00000513438 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
POLR2J3-217ENST00000513438 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
POLR2J3-217ENST00000513438 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
POLR2J3-217ENST00000513438 DSCR8Q96T75 97 aa6.49□□□□□ -1.37
POLR2J3-217ENST00000513438 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
POLR2J3-217ENST00000513438 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
POLR2J3-217ENST00000513438 A0A1W2PPM0 123 aa6.47□□□□□ -1.37
POLR2J3-217ENST00000513438 J3KT08 172 aa6.47□□□□□ -1.37
POLR2J3-217ENST00000513438 SCGB1C2P0DMR2 95 aa6.47□□□□□ -1.37
POLR2J3-217ENST00000513438 F8W1H4 67 aa6.46□□□□□ -1.38
POLR2J3-217ENST00000513438 C9JAW5 83 aa6.45□□□□□ -1.38
POLR2J3-217ENST00000513438 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
POLR2J3-217ENST00000513438 SPCS1Q9Y6A9 102 aa6.45□□□□□ -1.38
POLR2J3-217ENST00000513438 NDUFB1O75438 58 aa6.44□□□□□ -1.38
POLR2J3-217ENST00000513438 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
POLR2J3-217ENST00000513438 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
POLR2J3-217ENST00000513438 Q6ZQT0 140 aa6.44□□□□□ -1.38
POLR2J3-217ENST00000513438 A8MWP4 228 aa6.43□□□□□ -1.38
POLR2J3-217ENST00000513438 LYRM7Q5U5X0 104 aa6.42□□□□□ -1.38
POLR2J3-217ENST00000513438 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
POLR2J3-217ENST00000513438 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
POLR2J3-217ENST00000513438 IGKV3D-7A0A0C4DH55 119 aa6.37□□□□□ -1.39
POLR2J3-217ENST00000513438 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
POLR2J3-217ENST00000513438 Q6ZVQ6 151 aa6.35□□□□□ -1.39
POLR2J3-217ENST00000513438 JMJD7-PLA2G4BH0Y9G9 81 aa6.34□□□□□ -1.39
POLR2J3-217ENST00000513438 A0A1B0GW54 56 aa6.33□□□□□ -1.4
POLR2J3-217ENST00000513438 LOC110117498A0A087WWA1 95 aa6.32□□□□□ -1.4
POLR2J3-217ENST00000513438 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
POLR2J3-217ENST00000513438 PRR15Q8IV56 129 aa6.31□□□□□ -1.4
POLR2J3-217ENST00000513438 ANAPC13Q9BS18 74 aa6.31□□□□□ -1.4
POLR2J3-217ENST00000513438 PDE6GP18545 87 aa6.3□□□□□ -1.4
POLR2J3-217ENST00000513438 ATXN8Q156A1 80 aa6.3□□□□□ -1.4
POLR2J3-217ENST00000513438 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
POLR2J3-217ENST00000513438 NREPQ16612 68 aa6.29□□□□□ -1.4
POLR2J3-217ENST00000513438 MRPL34Q9BQ48 92 aaKnown RBP6.29□□□□□ -1.4
POLR2J3-217ENST00000513438 NAA38Q9BRA0 125 aaKnown RBP6.29□□□□□ -1.4
POLR2J3-217ENST00000513438 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
POLR2J3-217ENST00000513438 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
POLR2J3-217ENST00000513438 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
POLR2J3-217ENST00000513438 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
POLR2J3-217ENST00000513438 NDUFS5O43920 106 aa6.25□□□□□ -1.41
POLR2J3-217ENST00000513438 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
POLR2J3-217ENST00000513438 MT-ATP8P03928 68 aa6.24□□□□□ -1.41
POLR2J3-217ENST00000513438 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
POLR2J3-217ENST00000513438 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
POLR2J3-217ENST00000513438 K7EQZ3 153 aa6.21□□□□□ -1.42
POLR2J3-217ENST00000513438 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
POLR2J3-217ENST00000513438 SMIM20Q8N5G0 67 aa6.21□□□□□ -1.42
POLR2J3-217ENST00000513438 Q5W150 140 aa6.19□□□□□ -1.42
POLR2J3-217ENST00000513438 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
POLR2J3-217ENST00000513438 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
POLR2J3-217ENST00000513438 BPY2O14599 106 aa6.14□□□□□ -1.43
POLR2J3-217ENST00000513438 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
POLR2J3-217ENST00000513438 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
POLR2J3-217ENST00000513438 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
POLR2J3-217ENST00000513438 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
POLR2J3-217ENST00000513438 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
POLR2J3-217ENST00000513438 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
POLR2J3-217ENST00000513438 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
POLR2J3-217ENST00000513438 NEBP20929 6669 aa6.09□□□□□ -1.43
POLR2J3-217ENST00000513438 Q8N9L7 120 aa6.09□□□□□ -1.43
POLR2J3-217ENST00000513438 FAM236AA0A1B0GUQ0 79 aa6.08□□□□□ -1.44
POLR2J3-217ENST00000513438 FAM236BA0A1B0GV22 79 aa6.08□□□□□ -1.44
POLR2J3-217ENST00000513438 H3BT86 120 aa6.08□□□□□ -1.44
POLR2J3-217ENST00000513438 ACYP1P07311 99 aa6.08□□□□□ -1.44
POLR2J3-217ENST00000513438 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
POLR2J3-217ENST00000513438 A6NN06 94 aa6.07□□□□□ -1.44
POLR2J3-217ENST00000513438 MUC12Q9UKN1 5478 aa6.07□□□□□ -1.44
POLR2J3-217ENST00000513438 UQCRQO14949 82 aa6.06□□□□□ -1.44
POLR2J3-217ENST00000513438 MT1BP07438 61 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms