RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CCKP06307 115 aa4.3□□□□□ -1.72
HMGXB3-204ENST00000513318 PDE6GP18545 87 aa4.3□□□□□ -1.72
HMGXB3-204ENST00000513318 PRR4Q16378 134 aa4.3□□□□□ -1.72
HMGXB3-204ENST00000513318 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
HMGXB3-204ENST00000513318 OBSCN-AS1Q96MR7 158 aa4.3□□□□□ -1.72
HMGXB3-204ENST00000513318 HERC1Q15751 4861 aa4.3□□□□□ -1.72
HMGXB3-204ENST00000513318 LOC110117498A0A087WWA1 95 aa4.29□□□□□ -1.72
HMGXB3-204ENST00000513318 ASB16-AS1Q495Z4 193 aa4.29□□□□□ -1.72
HMGXB3-204ENST00000513318 C14orf132Q9NPU4 83 aa4.29□□□□□ -1.72
HMGXB3-204ENST00000513318 A0A087WSZ3 146 aa4.28□□□□□ -1.72
HMGXB3-204ENST00000513318 K7ERU9 68 aa4.28□□□□□ -1.72
HMGXB3-204ENST00000513318 Q6ZQT0 140 aa4.28□□□□□ -1.72
HMGXB3-204ENST00000513318 VPS25Q9BRG1 176 aa4.28□□□□□ -1.72
HMGXB3-204ENST00000513318 IGLV7-46A0A075B6I9 117 aa4.26□□□□□ -1.73
HMGXB3-204ENST00000513318 A0A1B0GW54 56 aa4.26□□□□□ -1.73
HMGXB3-204ENST00000513318 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
HMGXB3-204ENST00000513318 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
HMGXB3-204ENST00000513318 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
HMGXB3-204ENST00000513318 Q96NJ1 140 aa4.23□□□□□ -1.73
HMGXB3-204ENST00000513318 J3QR89 54 aa4.21□□□□□ -1.74
HMGXB3-204ENST00000513318 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
HMGXB3-204ENST00000513318 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
HMGXB3-204ENST00000513318 SIGMAR1Q99720 223 aa4.2□□□□□ -1.74
HMGXB3-204ENST00000513318 LINC00472Q9H8W2 130 aa4.2□□□□□ -1.74
HMGXB3-204ENST00000513318 IGKV4-1P06312 121 aa4.19□□□□□ -1.74
HMGXB3-204ENST00000513318 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
HMGXB3-204ENST00000513318 LPAP08519 4548 aa4.19□□□□□ -1.74
HMGXB3-204ENST00000513318 J3KT08 172 aa4.18□□□□□ -1.74
HMGXB3-204ENST00000513318 NREPQ16612 68 aa4.18□□□□□ -1.74
HMGXB3-204ENST00000513318 C9orf92A6NGG3 77 aa4.17□□□□□ -1.74
HMGXB3-204ENST00000513318 LRP2P98164 4655 aa4.17□□□□□ -1.74
HMGXB3-204ENST00000513318 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
HMGXB3-204ENST00000513318 FAM240AA0A1B0GVK7 77 aa4.15□□□□□ -1.75
HMGXB3-204ENST00000513318 Q6ZVQ6 151 aa4.15□□□□□ -1.75
HMGXB3-204ENST00000513318 UBL5Q9BZL1 73 aa4.15□□□□□ -1.75
HMGXB3-204ENST00000513318 LINC00846Q9NV44 126 aa4.15□□□□□ -1.75
HMGXB3-204ENST00000513318 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
HMGXB3-204ENST00000513318 NDUFB1O75438 58 aa4.14□□□□□ -1.75
HMGXB3-204ENST00000513318 A8MWP4 228 aa4.13□□□□□ -1.75
HMGXB3-204ENST00000513318 C8orf87E5RJ46 101 aa4.13□□□□□ -1.75
HMGXB3-204ENST00000513318 BPY2O14599 106 aa4.13□□□□□ -1.75
HMGXB3-204ENST00000513318 ACYP1P07311 99 aa4.13□□□□□ -1.75
HMGXB3-204ENST00000513318 IGHV6-1A0A0B4J1U7 121 aa4.12□□□□□ -1.75
HMGXB3-204ENST00000513318 LINC00313P59037 77 aa4.12□□□□□ -1.75
HMGXB3-204ENST00000513318 SCGB1A1P11684 91 aa4.11□□□□□ -1.75
HMGXB3-204ENST00000513318 DSCR10P59022 87 aa4.11□□□□□ -1.75
HMGXB3-204ENST00000513318 IGKV3D-7A0A0C4DH55 119 aa4.1□□□□□ -1.75
HMGXB3-204ENST00000513318 K7EQZ3 153 aa4.1□□□□□ -1.75
HMGXB3-204ENST00000513318 PCP4P48539 62 aa4.1□□□□□ -1.75
HMGXB3-204ENST00000513318 SEC61BP60468 96 aaKnown RBP4.1□□□□□ -1.75
HMGXB3-204ENST00000513318 RPL37P61927 97 aaKnown RBP4.1□□□□□ -1.75
HMGXB3-204ENST00000513318 PRR15Q8IV56 129 aa4.1□□□□□ -1.75
HMGXB3-204ENST00000513318 MT-ATP8P03928 68 aa4.09□□□□□ -1.75
HMGXB3-204ENST00000513318 Q75L30 129 aa4.09□□□□□ -1.75
HMGXB3-204ENST00000513318 C20orf166-AS1Q96NR2 134 aa4.09□□□□□ -1.75
HMGXB3-204ENST00000513318 A8MUU9 505 aa4.08□□□□□ -1.76
HMGXB3-204ENST00000513318 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
HMGXB3-204ENST00000513318 CXCL6P80162 114 aa4.08□□□□□ -1.76
HMGXB3-204ENST00000513318 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
HMGXB3-204ENST00000513318 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
HMGXB3-204ENST00000513318 ATP5EP2Q5VTU8 51 aa4.07□□□□□ -1.76
HMGXB3-204ENST00000513318 MMP24-AS1A0A0U1RRL7 71 aa4.06□□□□□ -1.76
HMGXB3-204ENST00000513318 Q8N9L7 120 aa4.06□□□□□ -1.76
HMGXB3-204ENST00000513318 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
HMGXB3-204ENST00000513318 PCOTHQ58A44 107 aa4.05□□□□□ -1.76
HMGXB3-204ENST00000513318 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
HMGXB3-204ENST00000513318 TMEM254Q8TBM7 123 aa4.05□□□□□ -1.76
HMGXB3-204ENST00000513318 hDV103S1A0JD37 113 aa4.04□□□□□ -1.76
HMGXB3-204ENST00000513318 LINC00643Q86TS7 51 aa4.04□□□□□ -1.76
HMGXB3-204ENST00000513318 Q8N9P0 234 aaPredicted RBP4.04□□□□□ -1.76
HMGXB3-204ENST00000513318 MRPL34Q9BQ48 92 aaKnown RBP4.04□□□□□ -1.76
HMGXB3-204ENST00000513318 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
HMGXB3-204ENST00000513318 IMUPQ9GZP8 106 aa4.03□□□□□ -1.76
HMGXB3-204ENST00000513318 HCG22E2RYF7 251 aa4.02□□□□□ -1.77
HMGXB3-204ENST00000513318 CASC2Q6XLA1 102 aa4.02□□□□□ -1.77
HMGXB3-204ENST00000513318 WFDC13Q8IUB5 93 aa4.02□□□□□ -1.77
HMGXB3-204ENST00000513318 NDUFS5O43920 106 aa3.99□□□□□ -1.77
HMGXB3-204ENST00000513318 HIST1H4AP62805 103 aaKnown RBP3.99□□□□□ -1.77
HMGXB3-204ENST00000513318 ZCCHC13Q8WW36 166 aaKnown RBP3.99□□□□□ -1.77
HMGXB3-204ENST00000513318 KRTAP4-1Q9BYQ7 146 aa3.99□□□□□ -1.77
HMGXB3-204ENST00000513318 RNF213Q63HN8 5207 aa3.98□□□□□ -1.77
HMGXB3-204ENST00000513318 A0A0U1RQV1 116 aa3.97□□□□□ -1.77
HMGXB3-204ENST00000513318 A0A087WVE0 104 aa3.94□□□□□ -1.78
HMGXB3-204ENST00000513318 TP53AIP1Q9HCN2 124 aa3.94□□□□□ -1.78
HMGXB3-204ENST00000513318 MUC2Q02817 5179 aa3.93□□□□□ -1.78
HMGXB3-204ENST00000513318 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
HMGXB3-204ENST00000513318 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
HMGXB3-204ENST00000513318 ANAPC13Q9BS18 74 aa3.93□□□□□ -1.78
HMGXB3-204ENST00000513318 SPINK7P58062 85 aa3.9□□□□□ -1.79
HMGXB3-204ENST00000513318 Q5W150 140 aa3.9□□□□□ -1.79
HMGXB3-204ENST00000513318 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
HMGXB3-204ENST00000513318 ATOX1O00244 68 aa3.89□□□□□ -1.79
HMGXB3-204ENST00000513318 C7orf65Q6ZTY9 151 aa3.89□□□□□ -1.79
HMGXB3-204ENST00000513318 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
HMGXB3-204ENST00000513318 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
HMGXB3-204ENST00000513318 UQCRQO14949 82 aa3.88□□□□□ -1.79
HMGXB3-204ENST00000513318 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
HMGXB3-204ENST00000513318 HRES1P13985 223 aa3.88□□□□□ -1.79
HMGXB3-204ENST00000513318 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
HMGXB3-204ENST00000513318 COX6B2Q6YFQ2 88 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms