RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 DCHS2Q6V1P9 2916 aa9.72□□□□□ -0.85
TRIO-221ENST00000513206 R4GN34 69 aa9.72□□□□□ -0.85
TRIO-221ENST00000513206 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
TRIO-221ENST00000513206 Q8NDZ9 215 aa9.71□□□□□ -0.85
TRIO-221ENST00000513206 KRTAP10-2P60368 255 aa9.71□□□□□ -0.85
TRIO-221ENST00000513206 TENM1Q9UKZ4 2725 aa9.69□□□□□ -0.86
TRIO-221ENST00000513206 FBN2P35556 2912 aa9.69□□□□□ -0.86
TRIO-221ENST00000513206 ZANQ9Y493 2812 aa9.68□□□□□ -0.86
TRIO-221ENST00000513206 NIPBLQ6KC79 2804 aaeCLIP9.68□□□□□ -0.86
TRIO-221ENST00000513206 Q5W150 140 aa9.67□□□□□ -0.86
TRIO-221ENST00000513206 DMDP11532 3685 aa9.65□□□□□ -0.86
TRIO-221ENST00000513206 ROMO1P60602 79 aa9.64□□□□□ -0.87
TRIO-221ENST00000513206 LINC00472Q9H8W2 130 aa9.64□□□□□ -0.87
TRIO-221ENST00000513206 NF1P21359 2839 aa9.63□□□□□ -0.87
TRIO-221ENST00000513206 SPENQ96T58 3664 aaKnown RBP9.61□□□□□ -0.87
TRIO-221ENST00000513206 RELNP78509 3460 aa9.61□□□□□ -0.87
TRIO-221ENST00000513206 CSMD1Q96PZ7 3565 aa9.6□□□□□ -0.87
TRIO-221ENST00000513206 SPATA8Q6RVD6 105 aa9.59□□□□□ -0.87
TRIO-221ENST00000513206 SPRR1BP22528 89 aa9.58□□□□□ -0.88
TRIO-221ENST00000513206 ZFHX4Q86UP3 3567 aa9.57□□□□□ -0.88
TRIO-221ENST00000513206 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
TRIO-221ENST00000513206 KRTAP25-1Q3LHN0 102 aa9.54□□□□□ -0.88
TRIO-221ENST00000513206 Q6ZR54 194 aa9.54□□□□□ -0.88
TRIO-221ENST00000513206 ZFHX3Q15911 3703 aa9.51□□□□□ -0.89
TRIO-221ENST00000513206 A8MU10 97 aa9.5□□□□□ -0.89
TRIO-221ENST00000513206 HRNRQ86YZ3 2850 aaPredicted RBP9.49□□□□□ -0.89
TRIO-221ENST00000513206 ADM2Q7Z4H4 148 aa9.49□□□□□ -0.89
TRIO-221ENST00000513206 RPL37P61927 97 aaKnown RBP9.49□□□□□ -0.89
TRIO-221ENST00000513206 M0QZ58 72 aa9.47□□□□□ -0.89
TRIO-221ENST00000513206 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
TRIO-221ENST00000513206 A0A087X002 238 aa9.45□□□□□ -0.9
TRIO-221ENST00000513206 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
TRIO-221ENST00000513206 PANO1I0J062 215 aa9.44□□□□□ -0.9
TRIO-221ENST00000513206 H1FX-AS1Q4G0G2 97 aa9.43□□□□□ -0.9
TRIO-221ENST00000513206 NDUFAF8A1L188 74 aa9.42□□□□□ -0.9
TRIO-221ENST00000513206 TENM4Q6N022 2769 aa9.39□□□□□ -0.91
TRIO-221ENST00000513206 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
TRIO-221ENST00000513206 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
TRIO-221ENST00000513206 PKD1L1Q8TDX9 2849 aa9.29□□□□□ -0.92
TRIO-221ENST00000513206 MUC3AQ02505 3323 aa9.29□□□□□ -0.92
TRIO-221ENST00000513206 MXRA5Q9NR99 2828 aa9.26□□□□□ -0.93
TRIO-221ENST00000513206 CUBNO60494 3623 aa9.22□□□□□ -0.93
TRIO-221ENST00000513206 VWFP04275 2813 aa9.22□□□□□ -0.93
TRIO-221ENST00000513206 SVEP1Q4LDE5 3571 aa9.21□□□□□ -0.94
TRIO-221ENST00000513206 RPS29P62273 56 aaKnown RBP9.2□□□□□ -0.94
TRIO-221ENST00000513206 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
TRIO-221ENST00000513206 Q6ZRN7 208 aaPredicted RBP9.18□□□□□ -0.94
TRIO-221ENST00000513206 KRTAP11-1Q8IUC1 163 aa9.17□□□□□ -0.94
TRIO-221ENST00000513206 PDZD2O15018 2839 aa9.17□□□□□ -0.94
TRIO-221ENST00000513206 NOTCH2NLQ7Z3S9 236 aa9.16□□□□□ -0.94
TRIO-221ENST00000513206 A8MUU9 505 aa9.15□□□□□ -0.94
TRIO-221ENST00000513206 KRTAP21-3Q3LHN1 58 aa9.09□□□□□ -0.95
TRIO-221ENST00000513206 C20orf166-AS1Q96NR2 134 aa9.08□□□□□ -0.96
TRIO-221ENST00000513206 BSNQ9UPA5 3926 aa9.03□□□□□ -0.96
TRIO-221ENST00000513206 TGP01266 2768 aa9.02□□□□□ -0.96
TRIO-221ENST00000513206 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
TRIO-221ENST00000513206 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
TRIO-221ENST00000513206 VPS13CQ709C8 3753 aa8.98□□□□□ -0.97
TRIO-221ENST00000513206 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.97
TRIO-221ENST00000513206 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
TRIO-221ENST00000513206 TRRAPQ9Y4A5 3859 aa8.85□□□□□ -0.99
TRIO-221ENST00000513206 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
TRIO-221ENST00000513206 CSMD2Q7Z408 3487 aa8.82□□□□□ -1
TRIO-221ENST00000513206 TNP1P09430 55 aa8.79□□□□□ -1
TRIO-221ENST00000513206 FBN1P35555 2871 aaKnown RBP8.78□□□□□ -1
TRIO-221ENST00000513206 H0YAA0 97 aa8.7□□□□□ -1.02
TRIO-221ENST00000513206 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
TRIO-221ENST00000513206 A0A1B0GVY2 172 aa8.65□□□□□ -1.02
TRIO-221ENST00000513206 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
TRIO-221ENST00000513206 XP32Q5T750 250 aa8.64□□□□□ -1.03
TRIO-221ENST00000513206 P0C880 135 aa8.63□□□□□ -1.03
TRIO-221ENST00000513206 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
TRIO-221ENST00000513206 TPRXLQ17RH7 258 aa8.56□□□□□ -1.04
TRIO-221ENST00000513206 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
TRIO-221ENST00000513206 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
TRIO-221ENST00000513206 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
TRIO-221ENST00000513206 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
TRIO-221ENST00000513206 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
TRIO-221ENST00000513206 CSMD3Q7Z407 3707 aa8.49□□□□□ -1.05
TRIO-221ENST00000513206 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
TRIO-221ENST00000513206 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
TRIO-221ENST00000513206 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
TRIO-221ENST00000513206 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
TRIO-221ENST00000513206 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
TRIO-221ENST00000513206 ANK3Q12955 4377 aaKnown RBP8.07□□□□□ -1.12
TRIO-221ENST00000513206 KRTAP12-2P59991 146 aa7.96□□□□□ -1.14
TRIO-221ENST00000513206 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
TRIO-221ENST00000513206 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
TRIO-221ENST00000513206 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
TRIO-221ENST00000513206 HUWE1Q7Z6Z7 4374 aaKnown RBP7.76□□□□□ -1.17
TRIO-221ENST00000513206 INE1O15225 51 aa7.73□□□□□ -1.17
TRIO-221ENST00000513206 LYSTQ99698 3801 aa7.64□□□□□ -1.19
TRIO-221ENST00000513206 KMT2AQ03164 3969 aa7.57□□□□□ -1.2
TRIO-221ENST00000513206 FRAS1Q86XX4 4008 aa7.55□□□□□ -1.2
TRIO-221ENST00000513206 ALMS1Q8TCU4 4167 aa7.54□□□□□ -1.2
TRIO-221ENST00000513206 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
TRIO-221ENST00000513206 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
TRIO-221ENST00000513206 CMYA5Q8N3K9 4069 aa7.44□□□□□ -1.22
TRIO-221ENST00000513206 ANK2Q01484 3957 aa7.44□□□□□ -1.22
TRIO-221ENST00000513206 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms