RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 A0A1B0GVX0 72 aa3.64□□□□□ -1.83
CLCN3-208ENST00000512813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.64□□□□□ -1.83
CLCN3-208ENST00000512813 LINC00472Q9H8W2 130 aa3.64□□□□□ -1.83
CLCN3-208ENST00000512813 KRTAP15-1Q3LI76 137 aa3.63□□□□□ -1.83
CLCN3-208ENST00000512813 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
CLCN3-208ENST00000512813 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
CLCN3-208ENST00000512813 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
CLCN3-208ENST00000512813 H0Y8G0 127 aa3.61□□□□□ -1.83
CLCN3-208ENST00000512813 VAMP3Q15836 100 aa3.61□□□□□ -1.83
CLCN3-208ENST00000512813 COX19Q49B96 90 aa3.61□□□□□ -1.83
CLCN3-208ENST00000512813 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
CLCN3-208ENST00000512813 S4R3F8 94 aa3.6□□□□□ -1.83
CLCN3-208ENST00000512813 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
CLCN3-208ENST00000512813 E9PLD3 99 aa3.58□□□□□ -1.84
CLCN3-208ENST00000512813 DPM2O94777 84 aa3.58□□□□□ -1.84
CLCN3-208ENST00000512813 IGKCP01834 107 aa3.55□□□□□ -1.84
CLCN3-208ENST00000512813 NDUFV3P56181 108 aaKnown RBP3.55□□□□□ -1.84
CLCN3-208ENST00000512813 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
CLCN3-208ENST00000512813 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
CLCN3-208ENST00000512813 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
CLCN3-208ENST00000512813 COPS9Q8WXC6 57 aa3.54□□□□□ -1.84
CLCN3-208ENST00000512813 TRBV7-4A0A0J9YYF1 115 aa3.53□□□□□ -1.84
CLCN3-208ENST00000512813 S100PP25815 95 aa3.53□□□□□ -1.84
CLCN3-208ENST00000512813 PMCHL2Q9BQD1 86 aa3.53□□□□□ -1.84
CLCN3-208ENST00000512813 HSPB8Q9UJY1 196 aa3.53□□□□□ -1.84
CLCN3-208ENST00000512813 A8MUN3 132 aa3.52□□□□□ -1.85
CLCN3-208ENST00000512813 H3BMG7 143 aa3.52□□□□□ -1.85
CLCN3-208ENST00000512813 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
CLCN3-208ENST00000512813 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
CLCN3-208ENST00000512813 IFITM1P13164 125 aa3.51□□□□□ -1.85
CLCN3-208ENST00000512813 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
CLCN3-208ENST00000512813 C12orf57Q99622 126 aa3.51□□□□□ -1.85
CLCN3-208ENST00000512813 MT1EP04732 61 aa3.5□□□□□ -1.85
CLCN3-208ENST00000512813 PDE6GP18545 87 aa3.5□□□□□ -1.85
CLCN3-208ENST00000512813 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
CLCN3-208ENST00000512813 K7EQZ3 153 aa3.49□□□□□ -1.85
CLCN3-208ENST00000512813 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
CLCN3-208ENST00000512813 C2orf91Q6ZV80 131 aa3.49□□□□□ -1.85
CLCN3-208ENST00000512813 H0YAA0 97 aa3.48□□□□□ -1.85
CLCN3-208ENST00000512813 TRGC2P03986 189 aa3.48□□□□□ -1.85
CLCN3-208ENST00000512813 HSBP1O75506 76 aa3.46□□□□□ -1.86
CLCN3-208ENST00000512813 LEPROTL1O95214 131 aa3.46□□□□□ -1.86
CLCN3-208ENST00000512813 MUSTN1Q8IVN3 82 aa3.46□□□□□ -1.86
CLCN3-208ENST00000512813 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
CLCN3-208ENST00000512813 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
CLCN3-208ENST00000512813 MT1GP13640 62 aa3.45□□□□□ -1.86
CLCN3-208ENST00000512813 Q6ZVQ6 151 aa3.44□□□□□ -1.86
CLCN3-208ENST00000512813 J3KT08 172 aa3.43□□□□□ -1.86
CLCN3-208ENST00000512813 BVES-AS1Q5T3Y7 98 aa3.43□□□□□ -1.86
CLCN3-208ENST00000512813 SCGB1D4Q6XE38 83 aa3.43□□□□□ -1.86
CLCN3-208ENST00000512813 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
CLCN3-208ENST00000512813 TRACP01848 142 aa3.42□□□□□ -1.86
CLCN3-208ENST00000512813 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
CLCN3-208ENST00000512813 ANKRD29Q8N6D5 301 aa3.42□□□□□ -1.86
CLCN3-208ENST00000512813 NDUFB1O75438 58 aa3.41□□□□□ -1.86
CLCN3-208ENST00000512813 NDUFA5Q16718 116 aa3.41□□□□□ -1.86
CLCN3-208ENST00000512813 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
CLCN3-208ENST00000512813 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CLCN3-208ENST00000512813 CCKP06307 115 aa3.39□□□□□ -1.87
CLCN3-208ENST00000512813 S100A1P23297 94 aa3.38□□□□□ -1.87
CLCN3-208ENST00000512813 MT1MQ8N339 61 aa3.38□□□□□ -1.87
CLCN3-208ENST00000512813 FABP2P12104 132 aa3.37□□□□□ -1.87
CLCN3-208ENST00000512813 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
CLCN3-208ENST00000512813 MRPL34Q9BQ48 92 aaKnown RBP3.36□□□□□ -1.87
CLCN3-208ENST00000512813 SNCGO76070 127 aa3.35□□□□□ -1.87
CLCN3-208ENST00000512813 FABP4P15090 132 aa3.35□□□□□ -1.87
CLCN3-208ENST00000512813 Q5W150 140 aa3.35□□□□□ -1.87
CLCN3-208ENST00000512813 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CLCN3-208ENST00000512813 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
CLCN3-208ENST00000512813 TMEM254Q8TBM7 123 aa3.35□□□□□ -1.87
CLCN3-208ENST00000512813 A0A1B0GV72 72 aa3.33□□□□□ -1.88
CLCN3-208ENST00000512813 TMEM218A2RU14 115 aa3.32□□□□□ -1.88
CLCN3-208ENST00000512813 NDUFS5O43920 106 aa3.31□□□□□ -1.88
CLCN3-208ENST00000512813 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
CLCN3-208ENST00000512813 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
CLCN3-208ENST00000512813 hDV103S1A0JD37 113 aa3.28□□□□□ -1.88
CLCN3-208ENST00000512813 APOC3P02656 99 aa3.28□□□□□ -1.88
CLCN3-208ENST00000512813 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
CLCN3-208ENST00000512813 H0YGX0 51 aa3.27□□□□□ -1.89
CLCN3-208ENST00000512813 SYS1-DBNDD2H3BUS1 97 aa3.27□□□□□ -1.89
CLCN3-208ENST00000512813 LINC01545Q5VT33 79 aa3.27□□□□□ -1.89
CLCN3-208ENST00000512813 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
CLCN3-208ENST00000512813 VPS25Q9BRG1 176 aa3.27□□□□□ -1.89
CLCN3-208ENST00000512813 R4GN34 69 aa3.27□□□□□ -1.89
CLCN3-208ENST00000512813 SVBPQ8N300 66 aa3.26□□□□□ -1.89
CLCN3-208ENST00000512813 YPEL4Q96NS1 127 aa3.26□□□□□ -1.89
CLCN3-208ENST00000512813 A0A1B0GX51 115 aa3.25□□□□□ -1.89
CLCN3-208ENST00000512813 C21orf62-AS1Q17RA5 79 aa3.25□□□□□ -1.89
CLCN3-208ENST00000512813 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
CLCN3-208ENST00000512813 SNAPINO95295 136 aa3.24□□□□□ -1.89
CLCN3-208ENST00000512813 A0A087WVE0 104 aa3.23□□□□□ -1.89
CLCN3-208ENST00000512813 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
CLCN3-208ENST00000512813 Q6ZQT0 140 aa3.23□□□□□ -1.89
CLCN3-208ENST00000512813 TMA7Q9Y2S6 64 aaKnown RBP3.23□□□□□ -1.89
CLCN3-208ENST00000512813 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
CLCN3-208ENST00000512813 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
CLCN3-208ENST00000512813 M0QZ58 72 aa3.2□□□□□ -1.9
CLCN3-208ENST00000512813 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
CLCN3-208ENST00000512813 MT1LQ93083 61 aa3.2□□□□□ -1.9
CLCN3-208ENST00000512813 HCG22E2RYF7 251 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms