RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 PRLHP81277 87 aa-0.46□□□□□ -2.48
RFC1-214ENST00000512726 KRTAP19-8Q3LI54 63 aa-0.46□□□□□ -2.48
RFC1-214ENST00000512726 MYO18BQ8IUG5 2567 aa-0.47□□□□□ -2.48
RFC1-214ENST00000512726 STARD9Q9P2P6 4700 aa-0.47□□□□□ -2.49
RFC1-214ENST00000512726 NBEAQ8NFP9 2946 aa-0.48□□□□□ -2.49
RFC1-214ENST00000512726 ITPR3Q14573 2671 aa-0.49□□□□□ -2.49
RFC1-214ENST00000512726 ANK3Q12955 4377 aaKnown RBP-0.49□□□□□ -2.49
RFC1-214ENST00000512726 MT1AP04731 61 aa-0.49□□□□□ -2.49
RFC1-214ENST00000512726 DEFB114Q30KQ6 69 aa-0.49□□□□□ -2.49
RFC1-214ENST00000512726 SPRR2FQ96RM1 72 aa-0.49□□□□□ -2.49
RFC1-214ENST00000512726 FAT1Q14517 4588 aa-0.49□□□□□ -2.49
RFC1-214ENST00000512726 CCDC168Q8NDH2 2452 aa-0.49□□□□□ -2.49
RFC1-214ENST00000512726 LAMA1P25391 3075 aa-0.5□□□□□ -2.49
RFC1-214ENST00000512726 C9orf92A6NGG3 77 aa-0.5□□□□□ -2.49
RFC1-214ENST00000512726 H3BNG1 76 aa-0.5□□□□□ -2.49
RFC1-214ENST00000512726 UTP20O75691 2785 aaKnown RBP-0.5□□□□□ -2.49
RFC1-214ENST00000512726 C3P01024 1663 aa-0.51□□□□□ -2.49
RFC1-214ENST00000512726 NBEAL2Q6ZNJ1 2754 aa-0.51□□□□□ -2.49
RFC1-214ENST00000512726 APOBP04114 4563 aaKnown RBP-0.52□□□□□ -2.49
RFC1-214ENST00000512726 USP9YO00507 2555 aaPredicted RBP-0.52□□□□□ -2.49
RFC1-214ENST00000512726 UBR4Q5T4S7 5183 aa-0.52□□□□□ -2.49
RFC1-214ENST00000512726 ANKRD36CQ5JPF3 1778 aa-0.52□□□□□ -2.49
RFC1-214ENST00000512726 DNAH11Q96DT5 4516 aa-0.54□□□□□ -2.5
RFC1-214ENST00000512726 MGAM2Q2M2H8 2515 aa-0.55□□□□□ -2.5
RFC1-214ENST00000512726 ACACBO00763 2458 aa-0.56□□□□□ -2.5
RFC1-214ENST00000512726 MUC17Q685J3 4493 aa-0.56□□□□□ -2.5
RFC1-214ENST00000512726 DEFB106AQ8N104 65 aa-0.56□□□□□ -2.5
RFC1-214ENST00000512726 ITSN2Q9NZM3 1697 aa-0.56□□□□□ -2.5
RFC1-214ENST00000512726 DNAH1Q9P2D7 4330 aa-0.57□□□□□ -2.5
RFC1-214ENST00000512726 A0A0C4DFX4 3053 aa-0.57□□□□□ -2.5
RFC1-214ENST00000512726 SACSQ9NZJ4 4579 aa-0.57□□□□□ -2.5
RFC1-214ENST00000512726 RIF1Q5UIP0 2472 aaKnown RBP-0.57□□□□□ -2.5
RFC1-214ENST00000512726 WDR87Q6ZQQ6 2873 aa-0.57□□□□□ -2.5
RFC1-214ENST00000512726 USH2AO75445 5202 aa-0.58□□□□□ -2.5
RFC1-214ENST00000512726 KRTAP20-2Q3LI61 65 aa-0.58□□□□□ -2.5
RFC1-214ENST00000512726 MINOS1Q5TGZ0 78 aa-0.58□□□□□ -2.5
RFC1-214ENST00000512726 RANBP2P49792 3224 aaKnown RBP-0.59□□□□□ -2.5
RFC1-214ENST00000512726 SPENQ96T58 3664 aaKnown RBP-0.59□□□□□ -2.5
RFC1-214ENST00000512726 S4R3F8 94 aa-0.59□□□□□ -2.5
RFC1-214ENST00000512726 ABCC6O95255 1503 aa-0.59□□□□□ -2.5
RFC1-214ENST00000512726 HERC2O95714 4834 aa-0.59□□□□□ -2.5
RFC1-214ENST00000512726 RELNP78509 3460 aa-0.6□□□□□ -2.51
RFC1-214ENST00000512726 EFCAB5A4FU69 1503 aa-0.61□□□□□ -2.51
RFC1-214ENST00000512726 DNMBPQ6XZF7 1577 aa-0.62□□□□□ -2.51
RFC1-214ENST00000512726 KIF1AQ12756 1690 aa-0.62□□□□□ -2.51
RFC1-214ENST00000512726 DNAH2Q9P225 4427 aa-0.62□□□□□ -2.51
RFC1-214ENST00000512726 MROH1Q8NDA8 1641 aa-0.62□□□□□ -2.51
RFC1-214ENST00000512726 MT4P47944 62 aa-0.62□□□□□ -2.51
RFC1-214ENST00000512726 TOGARAM1Q9Y4F4 1720 aa-0.62□□□□□ -2.51
RFC1-214ENST00000512726 SPTBN5Q9NRC6 3674 aaKnown RBP-0.62□□□□□ -2.51
RFC1-214ENST00000512726 TLN2Q9Y4G6 2542 aa-0.63□□□□□ -2.51
RFC1-214ENST00000512726 MADDQ8WXG6 1647 aa-0.64□□□□□ -2.51
RFC1-214ENST00000512726 TRIOO75962 3097 aa-0.64□□□□□ -2.51
RFC1-214ENST00000512726 USP9XQ93008 2570 aaPredicted RBP-0.64□□□□□ -2.51
RFC1-214ENST00000512726 WT1-ASQ06250 92 aa-0.65□□□□□ -2.51
RFC1-214ENST00000512726 DNAH8Q96JB1 4490 aa-0.65□□□□□ -2.51
RFC1-214ENST00000512726 COL12A1Q99715 3063 aa-0.66□□□□□ -2.51
RFC1-214ENST00000512726 RPS27P42677 84 aaKnown RBP-0.66□□□□□ -2.52
RFC1-214ENST00000512726 RPS27LQ71UM5 84 aaKnown RBP-0.66□□□□□ -2.52
RFC1-214ENST00000512726 TEX15Q9BXT5 2789 aa-0.67□□□□□ -2.52
RFC1-214ENST00000512726 LINC01549A6NIU2 74 aa-0.67□□□□□ -2.52
RFC1-214ENST00000512726 DEFB110Q30KQ9 67 aa-0.67□□□□□ -2.52
RFC1-214ENST00000512726 EPPK1P58107 5090 aaKnown RBP-0.67□□□□□ -2.52
RFC1-214ENST00000512726 NEBP20929 6669 aa-0.68□□□□□ -2.52
RFC1-214ENST00000512726 FRYQ5TBA9 3013 aa-0.69□□□□□ -2.52
RFC1-214ENST00000512726 LY75O60449 1722 aa-0.69□□□□□ -2.52
RFC1-214ENST00000512726 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.7□□□□□ -2.52
RFC1-214ENST00000512726 CMYA5Q8N3K9 4069 aa-0.7□□□□□ -2.52
RFC1-214ENST00000512726 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.7□□□□□ -2.52
RFC1-214ENST00000512726 C5orf42Q9H799 3197 aa-0.71□□□□□ -2.52
RFC1-214ENST00000512726 RYR1P21817 5038 aa-0.71□□□□□ -2.52
RFC1-214ENST00000512726 NCBP2-AS2Q69YL0 99 aa-0.71□□□□□ -2.52
RFC1-214ENST00000512726 IGLV5-48A0A075B6I7 105 aa-0.72□□□□□ -2.52
RFC1-214ENST00000512726 C6orf48Q9UBA6 75 aa-0.72□□□□□ -2.52
RFC1-214ENST00000512726 KRTAP19-5Q3LI72 72 aa-0.73□□□□□ -2.53
RFC1-214ENST00000512726 CDC42BPAQ5VT25 1732 aa-0.74□□□□□ -2.53
RFC1-214ENST00000512726 LAMA3Q16787 3333 aa-0.74□□□□□ -2.53
RFC1-214ENST00000512726 CELSR3Q9NYQ7 3312 aa-0.74□□□□□ -2.53
RFC1-214ENST00000512726 CLASP1Q7Z460 1538 aa-0.74□□□□□ -2.53
RFC1-214ENST00000512726 CCDC180Q9P1Z9 1646 aa-0.75□□□□□ -2.53
RFC1-214ENST00000512726 DOPEY1Q5JWR5 2465 aa-0.75□□□□□ -2.53
RFC1-214ENST00000512726 DNAH7Q8WXX0 4024 aa-0.75□□□□□ -2.53
RFC1-214ENST00000512726 FCER1GP30273 86 aa-0.75□□□□□ -2.53
RFC1-214ENST00000512726 PLECQ15149 4684 aaKnown RBP-0.75□□□□□ -2.53
RFC1-214ENST00000512726 ITPR1Q14643 2758 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 SRCAPQ6ZRS2 3230 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 MMP24-AS1A0A0U1RRL7 71 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 H3BUA1 57 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 SFTA3P0C7M3 94 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 MT1HP80294 61 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 CROCC2H7BZ55 1655 aa-0.76□□□□□ -2.53
RFC1-214ENST00000512726 NIPBLQ6KC79 2804 aaeCLIP-0.77□□□□□ -2.53
RFC1-214ENST00000512726 A0A087WWC5 75 aa-0.77□□□□□ -2.53
RFC1-214ENST00000512726 K7EMI3 77 aa-0.77□□□□□ -2.53
RFC1-214ENST00000512726 SPTAN1Q13813 2472 aaKnown RBP-0.77□□□□□ -2.53
RFC1-214ENST00000512726 BIRC6Q9NR09 4857 aa-0.78□□□□□ -2.53
RFC1-214ENST00000512726 DNHD1Q96M86 4753 aa-0.79□□□□□ -2.54
RFC1-214ENST00000512726 TNP1P09430 55 aa-0.79□□□□□ -2.54
RFC1-214ENST00000512726 DEFB1P60022 68 aa-0.8□□□□□ -2.54
RFC1-214ENST00000512726 NOP10Q9NPE3 64 aaKnown RBP-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms