RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 LRP2P98164 4655 aa7.76□□□□□ -1.17
DEPDC1B-206ENST00000512452 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
DEPDC1B-206ENST00000512452 MUC2Q02817 5179 aa7.76□□□□□ -1.17
DEPDC1B-206ENST00000512452 HCG22E2RYF7 251 aa7.75□□□□□ -1.17
DEPDC1B-206ENST00000512452 PRR15Q8IV56 129 aa7.75□□□□□ -1.17
DEPDC1B-206ENST00000512452 OXTP01178 125 aa7.74□□□□□ -1.17
DEPDC1B-206ENST00000512452 OCR1Q9BZK8 76 aa7.73□□□□□ -1.17
DEPDC1B-206ENST00000512452 NDUFB1O75438 58 aa7.72□□□□□ -1.17
DEPDC1B-206ENST00000512452 ASB16-AS1Q495Z4 193 aa7.72□□□□□ -1.17
DEPDC1B-206ENST00000512452 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
DEPDC1B-206ENST00000512452 Q96NJ1 140 aa7.72□□□□□ -1.17
DEPDC1B-206ENST00000512452 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.18
DEPDC1B-206ENST00000512452 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
DEPDC1B-206ENST00000512452 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
DEPDC1B-206ENST00000512452 Q5XG85 94 aa7.69□□□□□ -1.18
DEPDC1B-206ENST00000512452 HRCT1Q6UXD1 115 aa7.69□□□□□ -1.18
DEPDC1B-206ENST00000512452 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
DEPDC1B-206ENST00000512452 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
DEPDC1B-206ENST00000512452 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
DEPDC1B-206ENST00000512452 KRTAP13-2Q52LG2 175 aa7.67□□□□□ -1.18
DEPDC1B-206ENST00000512452 A0A087X002 238 aa7.66□□□□□ -1.18
DEPDC1B-206ENST00000512452 C20orf197Q8N268 126 aa7.66□□□□□ -1.18
DEPDC1B-206ENST00000512452 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
DEPDC1B-206ENST00000512452 NDUFC1O43677 76 aa7.65□□□□□ -1.18
DEPDC1B-206ENST00000512452 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
DEPDC1B-206ENST00000512452 TMEM258P61165 79 aa7.64□□□□□ -1.19
DEPDC1B-206ENST00000512452 MMP24-AS1A0A0U1RRL7 71 aa7.63□□□□□ -1.19
DEPDC1B-206ENST00000512452 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
DEPDC1B-206ENST00000512452 TMEM254Q8TBM7 123 aa7.63□□□□□ -1.19
DEPDC1B-206ENST00000512452 PKHD1L1Q86WI1 4243 aa7.63□□□□□ -1.19
DEPDC1B-206ENST00000512452 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
DEPDC1B-206ENST00000512452 WFDC13Q8IUB5 93 aa7.62□□□□□ -1.19
DEPDC1B-206ENST00000512452 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
DEPDC1B-206ENST00000512452 C8orf17Q9NRJ1 99 aa7.6□□□□□ -1.19
DEPDC1B-206ENST00000512452 A0A0U1RQV1 116 aa7.59□□□□□ -1.19
DEPDC1B-206ENST00000512452 hDV103S1A0JD37 113 aa7.59□□□□□ -1.19
DEPDC1B-206ENST00000512452 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
DEPDC1B-206ENST00000512452 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
DEPDC1B-206ENST00000512452 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
DEPDC1B-206ENST00000512452 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
DEPDC1B-206ENST00000512452 SPAG11AQ6PDA7 123 aa7.58□□□□□ -1.2
DEPDC1B-206ENST00000512452 C8orf87E5RJ46 101 aa7.57□□□□□ -1.2
DEPDC1B-206ENST00000512452 SPINK1P00995 79 aa7.57□□□□□ -1.2
DEPDC1B-206ENST00000512452 H3BPC8 53 aa7.56□□□□□ -1.2
DEPDC1B-206ENST00000512452 H7BZZ5 65 aa7.56□□□□□ -1.2
DEPDC1B-206ENST00000512452 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
DEPDC1B-206ENST00000512452 IGHV6-1A0A0B4J1U7 121 aa7.55□□□□□ -1.2
DEPDC1B-206ENST00000512452 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
DEPDC1B-206ENST00000512452 MP68P56378 58 aa7.54□□□□□ -1.2
DEPDC1B-206ENST00000512452 ATP5EP56381 51 aaPredicted RBP7.53□□□□□ -1.2
DEPDC1B-206ENST00000512452 C1orf195Q5TG92 126 aa7.53□□□□□ -1.2
DEPDC1B-206ENST00000512452 ZCCHC13Q8WW36 166 aaKnown RBP7.53□□□□□ -1.2
DEPDC1B-206ENST00000512452 FSIP2Q5CZC0 6907 aa7.52□□□□□ -1.2
DEPDC1B-206ENST00000512452 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
DEPDC1B-206ENST00000512452 FAT3Q8TDW7 4589 aa7.51□□□□□ -1.21
DEPDC1B-206ENST00000512452 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
DEPDC1B-206ENST00000512452 FAM236DA0A1B0GTK5 79 aa7.5□□□□□ -1.21
DEPDC1B-206ENST00000512452 FAM236CP0DP71 79 aa7.5□□□□□ -1.21
DEPDC1B-206ENST00000512452 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
DEPDC1B-206ENST00000512452 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
DEPDC1B-206ENST00000512452 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
DEPDC1B-206ENST00000512452 TRAV22A0A0B4J277 110 aa7.47□□□□□ -1.21
DEPDC1B-206ENST00000512452 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
DEPDC1B-206ENST00000512452 H0Y9P7 68 aa7.47□□□□□ -1.21
DEPDC1B-206ENST00000512452 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
DEPDC1B-206ENST00000512452 LINC00313P59037 77 aa7.45□□□□□ -1.22
DEPDC1B-206ENST00000512452 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
DEPDC1B-206ENST00000512452 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
DEPDC1B-206ENST00000512452 LINC00208Q96KT6 92 aa7.43□□□□□ -1.22
DEPDC1B-206ENST00000512452 NDUFS5O43920 106 aa7.42□□□□□ -1.22
DEPDC1B-206ENST00000512452 TNXBP22105 4242 aa7.41□□□□□ -1.22
DEPDC1B-206ENST00000512452 C1orf64Q8NEQ6 169 aa7.41□□□□□ -1.22
DEPDC1B-206ENST00000512452 Q8N9P0 234 aaPredicted RBP7.4□□□□□ -1.22
DEPDC1B-206ENST00000512452 SERP1Q9Y6X1 66 aa7.4□□□□□ -1.22
DEPDC1B-206ENST00000512452 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
DEPDC1B-206ENST00000512452 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
DEPDC1B-206ENST00000512452 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
DEPDC1B-206ENST00000512452 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
DEPDC1B-206ENST00000512452 KRTAP13-3Q3SY46 172 aa7.34□□□□□ -1.23
DEPDC1B-206ENST00000512452 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
DEPDC1B-206ENST00000512452 Q5W150 140 aa7.28□□□□□ -1.24
DEPDC1B-206ENST00000512452 IGLV7-46A0A075B6I9 117 aa7.27□□□□□ -1.25
DEPDC1B-206ENST00000512452 SMIM26A0A096LP01 95 aa7.23□□□□□ -1.25
DEPDC1B-206ENST00000512452 FP248Q71RG6 208 aaPredicted RBP7.23□□□□□ -1.25
DEPDC1B-206ENST00000512452 IGKV2-30P06310 120 aa7.22□□□□□ -1.25
DEPDC1B-206ENST00000512452 PCOTHQ58A44 107 aa7.21□□□□□ -1.26
DEPDC1B-206ENST00000512452 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
DEPDC1B-206ENST00000512452 A8MUU9 505 aa7.2□□□□□ -1.26
DEPDC1B-206ENST00000512452 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.2□□□□□ -1.26
DEPDC1B-206ENST00000512452 LPAP08519 4548 aa7.19□□□□□ -1.26
DEPDC1B-206ENST00000512452 PRR4Q16378 134 aa7.17□□□□□ -1.26
DEPDC1B-206ENST00000512452 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
DEPDC1B-206ENST00000512452 C9orf92A6NGG3 77 aa7.13□□□□□ -1.27
DEPDC1B-206ENST00000512452 Q75L30 129 aa7.13□□□□□ -1.27
DEPDC1B-206ENST00000512452 HRES1P13985 223 aa7.11□□□□□ -1.27
DEPDC1B-206ENST00000512452 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
DEPDC1B-206ENST00000512452 COA5Q86WW8 74 aa7.09□□□□□ -1.27
DEPDC1B-206ENST00000512452 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
DEPDC1B-206ENST00000512452 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
DEPDC1B-206ENST00000512452 ACYP2P14621 99 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms