RNA–Protein interactions for RNA: ENST00000512293.1

PDLIM3-207, Transcript of PDZ and LIM domain 3, humanhuman

TSL 3

Gene PDLIM3, Length 581 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-207ENST00000512293 DNAL4O96015 105 aa8.38□□□□□ -1.07
PDLIM3-207ENST00000512293 CEND1Q8N111 149 aa8.38□□□□□ -1.07
PDLIM3-207ENST00000512293 C14orf144Q96I85 54 aa8.38□□□□□ -1.07
PDLIM3-207ENST00000512293 C2orf91Q6ZV80 131 aa8.37□□□□□ -1.07
PDLIM3-207ENST00000512293 A0A1B0GV72 72 aa8.34□□□□□ -1.07
PDLIM3-207ENST00000512293 UBE2V1Q13404 147 aa8.33□□□□□ -1.08
PDLIM3-207ENST00000512293 Q8N9P0 234 aaPredicted RBP8.33□□□□□ -1.08
PDLIM3-207ENST00000512293 J3KT08 172 aa8.31□□□□□ -1.08
PDLIM3-207ENST00000512293 SPATA45Q537H7 98 aa8.31□□□□□ -1.08
PDLIM3-207ENST00000512293 FXYD2P54710 66 aa8.3□□□□□ -1.08
PDLIM3-207ENST00000512293 PAM16Q9Y3D7 125 aa8.3□□□□□ -1.08
PDLIM3-207ENST00000512293 C21orf62-AS1Q17RA5 79 aa8.29□□□□□ -1.08
PDLIM3-207ENST00000512293 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
PDLIM3-207ENST00000512293 COX6CP09669 75 aa8.26□□□□□ -1.09
PDLIM3-207ENST00000512293 VAMP8Q9BV40 100 aa8.25□□□□□ -1.09
PDLIM3-207ENST00000512293 PSMB2P49721 201 aa8.24□□□□□ -1.09
PDLIM3-207ENST00000512293 RBM3P98179 157 aaKnown RBP8.24□□□□□ -1.09
PDLIM3-207ENST00000512293 VPS25Q9BRG1 176 aa8.24□□□□□ -1.09
PDLIM3-207ENST00000512293 NEBP20929 6669 aa8.23□□□□□ -1.09
PDLIM3-207ENST00000512293 NDUFB1O75438 58 aa8.23□□□□□ -1.09
PDLIM3-207ENST00000512293 PYY3Q5JQD4 70 aa8.23□□□□□ -1.09
PDLIM3-207ENST00000512293 DSCR8Q96T75 97 aa8.23□□□□□ -1.09
PDLIM3-207ENST00000512293 Q6ZQT0 140 aa8.21□□□□□ -1.1
PDLIM3-207ENST00000512293 LYRM7Q5U5X0 104 aa8.18□□□□□ -1.1
PDLIM3-207ENST00000512293 C8orf17Q9NRJ1 99 aa8.18□□□□□ -1.1
PDLIM3-207ENST00000512293 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
PDLIM3-207ENST00000512293 C9JAW5 83 aa8.16□□□□□ -1.1
PDLIM3-207ENST00000512293 K7ERJ3 54 aa8.16□□□□□ -1.1
PDLIM3-207ENST00000512293 HSD52Q0P140 79 aa8.16□□□□□ -1.1
PDLIM3-207ENST00000512293 TMA7Q9Y2S6 64 aaKnown RBP8.15□□□□□ -1.1
PDLIM3-207ENST00000512293 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
PDLIM3-207ENST00000512293 A0A1B0GW54 56 aa8.14□□□□□ -1.11
PDLIM3-207ENST00000512293 MUC12Q9UKN1 5478 aa8.14□□□□□ -1.11
PDLIM3-207ENST00000512293 Q6ZVQ6 151 aa8.12□□□□□ -1.11
PDLIM3-207ENST00000512293 BAALC-AS2P0C853 105 aa8.08□□□□□ -1.12
PDLIM3-207ENST00000512293 SCGB1C2P0DMR2 95 aa8.06□□□□□ -1.12
PDLIM3-207ENST00000512293 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
PDLIM3-207ENST00000512293 LOC110117498A0A087WWA1 95 aa8.04□□□□□ -1.12
PDLIM3-207ENST00000512293 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
PDLIM3-207ENST00000512293 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
PDLIM3-207ENST00000512293 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
PDLIM3-207ENST00000512293 PDE6GP18545 87 aa8.01□□□□□ -1.13
PDLIM3-207ENST00000512293 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
PDLIM3-207ENST00000512293 MMP24-AS1A0A0U1RRL7 71 aa8□□□□□ -1.13
PDLIM3-207ENST00000512293 A6NN06 94 aa8□□□□□ -1.13
PDLIM3-207ENST00000512293 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
PDLIM3-207ENST00000512293 C7orf65Q6ZTY9 151 aa7.95□□□□□ -1.14
PDLIM3-207ENST00000512293 MT1BP07438 61 aa7.94□□□□□ -1.14
PDLIM3-207ENST00000512293 NREPQ16612 68 aa7.94□□□□□ -1.14
PDLIM3-207ENST00000512293 KRTAP20-1Q3LI63 56 aa7.94□□□□□ -1.14
PDLIM3-207ENST00000512293 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
PDLIM3-207ENST00000512293 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
PDLIM3-207ENST00000512293 NDUFS5O43920 106 aa7.91□□□□□ -1.14
PDLIM3-207ENST00000512293 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
PDLIM3-207ENST00000512293 Q5VV11 94 aa7.91□□□□□ -1.14
PDLIM3-207ENST00000512293 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.14
PDLIM3-207ENST00000512293 KRTAP5-9P26371 169 aa7.89□□□□□ -1.15
PDLIM3-207ENST00000512293 Q5W150 140 aa7.89□□□□□ -1.15
PDLIM3-207ENST00000512293 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
PDLIM3-207ENST00000512293 C14orf132Q9NPU4 83 aa7.89□□□□□ -1.15
PDLIM3-207ENST00000512293 K7EQZ3 153 aa7.88□□□□□ -1.15
PDLIM3-207ENST00000512293 SMIM6P0DI80 62 aa7.88□□□□□ -1.15
PDLIM3-207ENST00000512293 KRTAP10-5P60370 271 aa7.87□□□□□ -1.15
PDLIM3-207ENST00000512293 MDN1Q9NU22 5596 aa7.87□□□□□ -1.15
PDLIM3-207ENST00000512293 FAM236AA0A1B0GUQ0 79 aa7.86□□□□□ -1.15
PDLIM3-207ENST00000512293 FAM236BA0A1B0GV22 79 aa7.86□□□□□ -1.15
PDLIM3-207ENST00000512293 KMT2DO14686 5537 aa7.86□□□□□ -1.15
PDLIM3-207ENST00000512293 LOC105371267A0A1B0GV96 52 aa7.84□□□□□ -1.15
PDLIM3-207ENST00000512293 C4orf26Q17RF5 130 aa7.84□□□□□ -1.15
PDLIM3-207ENST00000512293 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
PDLIM3-207ENST00000512293 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
PDLIM3-207ENST00000512293 M0R143 59 aa7.77□□□□□ -1.17
PDLIM3-207ENST00000512293 BPY2O14599 106 aa7.76□□□□□ -1.17
PDLIM3-207ENST00000512293 NAA38Q9BRA0 125 aaKnown RBP7.76□□□□□ -1.17
PDLIM3-207ENST00000512293 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
PDLIM3-207ENST00000512293 S4R3F8 94 aa7.76□□□□□ -1.17
PDLIM3-207ENST00000512293 CXCL6P80162 114 aa7.74□□□□□ -1.17
PDLIM3-207ENST00000512293 HCG22E2RYF7 251 aa7.73□□□□□ -1.17
PDLIM3-207ENST00000512293 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
PDLIM3-207ENST00000512293 KLKP1Q107X0 134 aa7.71□□□□□ -1.18
PDLIM3-207ENST00000512293 TSTD3H0UI37 97 aa7.7□□□□□ -1.18
PDLIM3-207ENST00000512293 LCA10Q71F78 164 aa7.7□□□□□ -1.18
PDLIM3-207ENST00000512293 KRTAP2-3P0C7H8 128 aa7.66□□□□□ -1.18
PDLIM3-207ENST00000512293 C1orf64Q8NEQ6 169 aa7.66□□□□□ -1.18
PDLIM3-207ENST00000512293 KRTAP2-4Q9BYR9 128 aa7.66□□□□□ -1.18
PDLIM3-207ENST00000512293 Q8N9L7 120 aa7.65□□□□□ -1.18
PDLIM3-207ENST00000512293 H3BT86 120 aa7.64□□□□□ -1.19
PDLIM3-207ENST00000512293 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
PDLIM3-207ENST00000512293 CRIPTQ9P021 101 aa7.63□□□□□ -1.19
PDLIM3-207ENST00000512293 BATFQ16520 125 aa7.62□□□□□ -1.19
PDLIM3-207ENST00000512293 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
PDLIM3-207ENST00000512293 SMCPP49901 116 aaPredicted RBP7.6□□□□□ -1.19
PDLIM3-207ENST00000512293 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
PDLIM3-207ENST00000512293 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
PDLIM3-207ENST00000512293 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
PDLIM3-207ENST00000512293 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
PDLIM3-207ENST00000512293 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
PDLIM3-207ENST00000512293 SPRR2EP22531 72 aa7.47□□□□□ -1.21
PDLIM3-207ENST00000512293 SPRR2BP35325 72 aa7.47□□□□□ -1.21
PDLIM3-207ENST00000512293 SPRR2AP35326 72 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms