RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
HTT-209ENST00000512068 A0A087WVE0 104 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 ATOX1O00244 68 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 IGKV4-1P06312 121 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 SPAG11AQ6PDA7 123 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 PRR26Q8N8Z3 221 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
HTT-209ENST00000512068 SRRM2Q9UQ35 2752 aaKnown RBP4.73□□□□□ -1.65
HTT-209ENST00000512068 SPINK1P00995 79 aa4.72□□□□□ -1.65
HTT-209ENST00000512068 Q8N9L7 120 aa4.72□□□□□ -1.65
HTT-209ENST00000512068 A8MWP4 228 aa4.71□□□□□ -1.66
HTT-209ENST00000512068 KRTAP10-4P60372 401 aaPredicted RBP4.71□□□□□ -1.66
HTT-209ENST00000512068 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.66
HTT-209ENST00000512068 K7EQZ3 153 aa4.7□□□□□ -1.66
HTT-209ENST00000512068 DSCR10P59022 87 aa4.7□□□□□ -1.66
HTT-209ENST00000512068 HCG22E2RYF7 251 aa4.69□□□□□ -1.66
HTT-209ENST00000512068 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
HTT-209ENST00000512068 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
HTT-209ENST00000512068 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
HTT-209ENST00000512068 VPS13BQ7Z7G8 4022 aa4.69□□□□□ -1.66
HTT-209ENST00000512068 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
HTT-209ENST00000512068 Q5XG85 94 aa4.68□□□□□ -1.66
HTT-209ENST00000512068 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
HTT-209ENST00000512068 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
HTT-209ENST00000512068 RYR3Q15413 4870 aa4.68□□□□□ -1.66
HTT-209ENST00000512068 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
HTT-209ENST00000512068 Q96NJ1 140 aa4.67□□□□□ -1.66
HTT-209ENST00000512068 IGHV6-1A0A0B4J1U7 121 aa4.66□□□□□ -1.66
HTT-209ENST00000512068 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
HTT-209ENST00000512068 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
HTT-209ENST00000512068 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
HTT-209ENST00000512068 C8orf87E5RJ46 101 aa4.64□□□□□ -1.67
HTT-209ENST00000512068 SERP2Q8N6R1 65 aa4.64□□□□□ -1.67
HTT-209ENST00000512068 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
HTT-209ENST00000512068 C1orf195Q5TG92 126 aa4.63□□□□□ -1.67
HTT-209ENST00000512068 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
HTT-209ENST00000512068 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
HTT-209ENST00000512068 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
HTT-209ENST00000512068 UQCRQO14949 82 aa4.61□□□□□ -1.67
HTT-209ENST00000512068 NDUFS5O43920 106 aa4.61□□□□□ -1.67
HTT-209ENST00000512068 COX7CP15954 63 aa4.61□□□□□ -1.67
HTT-209ENST00000512068 LINC00313P59037 77 aa4.6□□□□□ -1.67
HTT-209ENST00000512068 TMEM254Q8TBM7 123 aa4.6□□□□□ -1.67
HTT-209ENST00000512068 OXTP01178 125 aa4.59□□□□□ -1.67
HTT-209ENST00000512068 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
HTT-209ENST00000512068 RYR1P21817 5038 aa4.58□□□□□ -1.68
HTT-209ENST00000512068 FAT1Q14517 4588 aa4.58□□□□□ -1.68
HTT-209ENST00000512068 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
HTT-209ENST00000512068 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
HTT-209ENST00000512068 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
HTT-209ENST00000512068 MP68P56378 58 aa4.57□□□□□ -1.68
HTT-209ENST00000512068 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
HTT-209ENST00000512068 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
HTT-209ENST00000512068 HSPG2P98160 4391 aa4.57□□□□□ -1.68
HTT-209ENST00000512068 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
HTT-209ENST00000512068 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
HTT-209ENST00000512068 C5orf47Q569G3 176 aa4.55□□□□□ -1.68
HTT-209ENST00000512068 C20orf197Q8N268 126 aa4.55□□□□□ -1.68
HTT-209ENST00000512068 BIRC6Q9NR09 4857 aa4.55□□□□□ -1.68
HTT-209ENST00000512068 FLG2Q5D862 2391 aaPredicted RBP4.54□□□□□ -1.68
HTT-209ENST00000512068 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
HTT-209ENST00000512068 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
HTT-209ENST00000512068 FP248Q71RG6 208 aaPredicted RBP4.53□□□□□ -1.68
HTT-209ENST00000512068 NOTCH2NLQ7Z3S9 236 aa4.53□□□□□ -1.68
HTT-209ENST00000512068 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
HTT-209ENST00000512068 H0Y9P7 68 aa4.52□□□□□ -1.69
HTT-209ENST00000512068 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
HTT-209ENST00000512068 H3BPC8 53 aa4.51□□□□□ -1.69
HTT-209ENST00000512068 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
HTT-209ENST00000512068 C9orf92A6NGG3 77 aa4.5□□□□□ -1.69
HTT-209ENST00000512068 NDUFC1O43677 76 aa4.5□□□□□ -1.69
HTT-209ENST00000512068 SNURFQ9Y675 71 aa4.5□□□□□ -1.69
HTT-209ENST00000512068 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
HTT-209ENST00000512068 KLKP1Q107X0 134 aa4.49□□□□□ -1.69
HTT-209ENST00000512068 LINC00208Q96KT6 92 aa4.49□□□□□ -1.69
HTT-209ENST00000512068 IGLV7-46A0A075B6I9 117 aa4.48□□□□□ -1.69
HTT-209ENST00000512068 PRR4Q16378 134 aa4.48□□□□□ -1.69
HTT-209ENST00000512068 DMBT1Q9UGM3 2413 aaPredicted RBP4.47□□□□□ -1.69
HTT-209ENST00000512068 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
HTT-209ENST00000512068 A0A0U1RQV1 116 aa4.47□□□□□ -1.69
HTT-209ENST00000512068 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
HTT-209ENST00000512068 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.7
HTT-209ENST00000512068 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
HTT-209ENST00000512068 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
HTT-209ENST00000512068 TMEM258P61165 79 aa4.45□□□□□ -1.7
HTT-209ENST00000512068 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
HTT-209ENST00000512068 FAT3Q8TDW7 4589 aa4.42□□□□□ -1.7
HTT-209ENST00000512068 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
HTT-209ENST00000512068 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
HTT-209ENST00000512068 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
HTT-209ENST00000512068 FAM236DA0A1B0GTK5 79 aa4.41□□□□□ -1.7
HTT-209ENST00000512068 A8MUU9 505 aa4.41□□□□□ -1.7
HTT-209ENST00000512068 H7BZZ5 65 aa4.41□□□□□ -1.7
HTT-209ENST00000512068 FAM236CP0DP71 79 aa4.41□□□□□ -1.7
HTT-209ENST00000512068 Q5W150 140 aa4.41□□□□□ -1.7
HTT-209ENST00000512068 CYSTM1Q9H1C7 97 aa4.41□□□□□ -1.7
HTT-209ENST00000512068 TNXBP22105 4242 aa4.4□□□□□ -1.7
HTT-209ENST00000512068 PCOTHQ58A44 107 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms