RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 IGLV9-49A0A0B4J1Y8 123 aa6.17□□□□□ -1.42
HOXA4-203ENST00000511914 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
HOXA4-203ENST00000511914 CD164Q04900 197 aa6.17□□□□□ -1.42
HOXA4-203ENST00000511914 NREPQ16612 68 aa6.17□□□□□ -1.42
HOXA4-203ENST00000511914 C9orf153Q5TBE3 101 aa6.17□□□□□ -1.42
HOXA4-203ENST00000511914 TNXBP22105 4242 aa6.17□□□□□ -1.42
HOXA4-203ENST00000511914 CXCL6P80162 114 aa6.16□□□□□ -1.42
HOXA4-203ENST00000511914 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
HOXA4-203ENST00000511914 MOBPQ13875 183 aa6.15□□□□□ -1.42
HOXA4-203ENST00000511914 SCGB1A1P11684 91 aa6.14□□□□□ -1.43
HOXA4-203ENST00000511914 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
HOXA4-203ENST00000511914 SS18L2Q9UHA2 77 aa6.12□□□□□ -1.43
HOXA4-203ENST00000511914 A0A087WSZ3 146 aa6.11□□□□□ -1.43
HOXA4-203ENST00000511914 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
HOXA4-203ENST00000511914 BPY2O14599 106 aa6.1□□□□□ -1.43
HOXA4-203ENST00000511914 KRTAP13-2Q52LG2 175 aa6.1□□□□□ -1.43
HOXA4-203ENST00000511914 A0A087X002 238 aa6.09□□□□□ -1.43
HOXA4-203ENST00000511914 IGKV3D-7A0A0C4DH55 119 aa6.09□□□□□ -1.43
HOXA4-203ENST00000511914 J3KT08 172 aa6.08□□□□□ -1.44
HOXA4-203ENST00000511914 Q5XG85 94 aa6.08□□□□□ -1.44
HOXA4-203ENST00000511914 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
HOXA4-203ENST00000511914 LINC00472Q9H8W2 130 aa6.07□□□□□ -1.44
HOXA4-203ENST00000511914 LPAP08519 4548 aa6.07□□□□□ -1.44
HOXA4-203ENST00000511914 SPAG11AQ6PDA7 123 aa6.06□□□□□ -1.44
HOXA4-203ENST00000511914 TYMSOSQ8TAI1 123 aa6.06□□□□□ -1.44
HOXA4-203ENST00000511914 SPINK1P00995 79 aa6.04□□□□□ -1.44
HOXA4-203ENST00000511914 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
HOXA4-203ENST00000511914 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
HOXA4-203ENST00000511914 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
HOXA4-203ENST00000511914 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
HOXA4-203ENST00000511914 DSCR10P59022 87 aa6.02□□□□□ -1.45
HOXA4-203ENST00000511914 HRCT1Q6UXD1 115 aa6.02□□□□□ -1.45
HOXA4-203ENST00000511914 A8MWP4 228 aa6.01□□□□□ -1.45
HOXA4-203ENST00000511914 IGKV4-1P06312 121 aa6.01□□□□□ -1.45
HOXA4-203ENST00000511914 PRR26Q8N8Z3 221 aa6.01□□□□□ -1.45
HOXA4-203ENST00000511914 Q96NJ1 140 aa6.01□□□□□ -1.45
HOXA4-203ENST00000511914 NDUFB1O75438 58 aa6□□□□□ -1.45
HOXA4-203ENST00000511914 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
HOXA4-203ENST00000511914 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
HOXA4-203ENST00000511914 LINC00304Q8N9R0 145 aa5.99□□□□□ -1.45
HOXA4-203ENST00000511914 PRR15Q8IV56 129 aa5.98□□□□□ -1.45
HOXA4-203ENST00000511914 A0A087WVE0 104 aa5.97□□□□□ -1.45
HOXA4-203ENST00000511914 ATOX1O00244 68 aa5.97□□□□□ -1.45
HOXA4-203ENST00000511914 K7EQZ3 153 aa5.96□□□□□ -1.46
HOXA4-203ENST00000511914 DEFB116Q30KQ4 102 aa5.96□□□□□ -1.46
HOXA4-203ENST00000511914 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
HOXA4-203ENST00000511914 Q8N9L7 120 aa5.95□□□□□ -1.46
HOXA4-203ENST00000511914 C1orf195Q5TG92 126 aa5.94□□□□□ -1.46
HOXA4-203ENST00000511914 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
HOXA4-203ENST00000511914 HCG22E2RYF7 251 aa5.93□□□□□ -1.46
HOXA4-203ENST00000511914 PCP4P48539 62 aa5.93□□□□□ -1.46
HOXA4-203ENST00000511914 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
HOXA4-203ENST00000511914 MUC2Q02817 5179 aa5.9□□□□□ -1.46
HOXA4-203ENST00000511914 C8orf87E5RJ46 101 aa5.9□□□□□ -1.46
HOXA4-203ENST00000511914 SERP2Q8N6R1 65 aa5.9□□□□□ -1.46
HOXA4-203ENST00000511914 TRAV7A0A075B6U4 112 aa5.89□□□□□ -1.47
HOXA4-203ENST00000511914 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
HOXA4-203ENST00000511914 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
HOXA4-203ENST00000511914 MMP24-AS1A0A0U1RRL7 71 aa5.88□□□□□ -1.47
HOXA4-203ENST00000511914 PRR4Q16378 134 aa5.88□□□□□ -1.47
HOXA4-203ENST00000511914 IGHV6-1A0A0B4J1U7 121 aa5.87□□□□□ -1.47
HOXA4-203ENST00000511914 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
HOXA4-203ENST00000511914 UQCRQO14949 82 aa5.86□□□□□ -1.47
HOXA4-203ENST00000511914 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
HOXA4-203ENST00000511914 COX7CP15954 63 aa5.85□□□□□ -1.47
HOXA4-203ENST00000511914 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
HOXA4-203ENST00000511914 LINC00313P59037 77 aa5.84□□□□□ -1.47
HOXA4-203ENST00000511914 WFDC13Q8IUB5 93 aa5.84□□□□□ -1.47
HOXA4-203ENST00000511914 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
HOXA4-203ENST00000511914 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
HOXA4-203ENST00000511914 A0A0U1RQV1 116 aa5.81□□□□□ -1.48
HOXA4-203ENST00000511914 FP248Q71RG6 208 aaPredicted RBP5.81□□□□□ -1.48
HOXA4-203ENST00000511914 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
HOXA4-203ENST00000511914 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
HOXA4-203ENST00000511914 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
HOXA4-203ENST00000511914 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
HOXA4-203ENST00000511914 H3BPC8 53 aa5.77□□□□□ -1.49
HOXA4-203ENST00000511914 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
HOXA4-203ENST00000511914 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
HOXA4-203ENST00000511914 KLKP1Q107X0 134 aa5.75□□□□□ -1.49
HOXA4-203ENST00000511914 TRAV22A0A0B4J277 110 aa5.73□□□□□ -1.49
HOXA4-203ENST00000511914 NDUFS5O43920 106 aa5.73□□□□□ -1.49
HOXA4-203ENST00000511914 MP68P56378 58 aa5.73□□□□□ -1.49
HOXA4-203ENST00000511914 NDUFC1O43677 76 aa5.72□□□□□ -1.49
HOXA4-203ENST00000511914 C20orf197Q8N268 126 aa5.72□□□□□ -1.49
HOXA4-203ENST00000511914 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
HOXA4-203ENST00000511914 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.5
HOXA4-203ENST00000511914 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
HOXA4-203ENST00000511914 H0Y9P7 68 aa5.7□□□□□ -1.5
HOXA4-203ENST00000511914 C20orf166-AS1Q96NR2 134 aa5.7□□□□□ -1.5
HOXA4-203ENST00000511914 A8MUU9 505 aa5.68□□□□□ -1.5
HOXA4-203ENST00000511914 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
HOXA4-203ENST00000511914 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
HOXA4-203ENST00000511914 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
HOXA4-203ENST00000511914 Q75L30 129 aa5.66□□□□□ -1.5
HOXA4-203ENST00000511914 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
HOXA4-203ENST00000511914 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
HOXA4-203ENST00000511914 C1orf64Q8NEQ6 169 aa5.65□□□□□ -1.5
HOXA4-203ENST00000511914 SNURFQ9Y675 71 aa5.65□□□□□ -1.5
HOXA4-203ENST00000511914 LOC101927531A0A1B0GV80 90 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms