RNA–Protein interactions for RNA: ENST00000511424.5

LIMCH1-212, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-212ENST00000511424 TRBV7-6A0A0J9YX20 115 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 TRBV10-3A0A0K0K1G6 114 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 hADV29S1A0JD25 119 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 LINC01549A6NIU2 74 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 SLC25A20O43772 301 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 NDUFC2O95298 119 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 TRACP01848 142 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 IGFL1Q6UW32 110 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 SCGB1D4Q6XE38 83 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 ADM2Q7Z4H4 148 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 C9orf163Q8N9P6 203 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 CLEC2BQ92478 149 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 C22orf24Q9Y442 160 aa1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 FLG2Q5D862 2391 aaPredicted RBP1.41□□□□□ -2.18
LIMCH1-212ENST00000511424 H3BT86 120 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 ACYP1P07311 99 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 SCGB1C2P0DMR2 95 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 SCXQ7RTU7 201 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 LINC00643Q86TS7 51 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 SERP2Q8N6R1 65 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 SPANXA2-OT1Q8N9U9 137 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 ST20-AS1Q8NBB2 130 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 SMIM11BQ8TCY0 68 aa1.4□□□□□ -2.19
LIMCH1-212ENST00000511424 LPAP08519 4548 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 TRBV10-2A0A0K0K1G8 114 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 M0R378 163 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 ATP5EP56381 51 aaPredicted RBP1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 CNBPP62633 177 aaKnown RBP1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 PRLHP81277 87 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 SPACA4Q8TDM5 124 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 SMCR5Q8TEV8 140 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 Q9BRP9 147 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 LAMTOR3Q9UHA4 124 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
LIMCH1-212ENST00000511424 A0A0B4J2C4 111 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 LOC107984156A0A0G2JMH3 177 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 TRBV30A0A0K0K1B3 111 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 TEX49A0A1B0GTD5 131 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 C16orf90A8MZG2 172 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 H7BZZ5 65 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 TIMM17BO60830 172 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 IGLV6-57P01721 117 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 IGLV7-43P04211 117 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 MP68P56378 58 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 ATXN8Q156A1 80 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 KTN1-AS1Q86SY8 53 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 ARL17AQ8IVW1 177 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 COPS9Q8WXC6 57 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 PSORS1C2Q9UIG4 136 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 PCLOQ9Y6V0 5065 aa1.38□□□□□ -2.19
LIMCH1-212ENST00000511424 HERC1Q15751 4861 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 A8MUU9 505 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 KLKP1Q107X0 134 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 CIRBPQ14011 172 aaKnown RBP1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 Q6JHZ5 121 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 Q6ZSA8 131 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 DEFB105AQ8NG35 78 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 PLAC8Q9NZF1 115 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 PRO1854Q9UHT4 67 aa1.37□□□□□ -2.19
LIMCH1-212ENST00000511424 A8MWP4 228 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 LST1O00453 97 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 BCE1O60756 84 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 CCKP06307 115 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 IGKV4-1P06312 121 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 UBE2BP63146 152 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 KRTAP13-2Q52LG2 175 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 C1orf137Q5JT78 98 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 S100A7L2Q5SY68 101 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 SPINT4Q6UDR6 99 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 LINC00575Q6W349 94 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 KRTAP13-1Q8IUC0 172 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 HIGD2AQ9BW72 106 aa1.36□□□□□ -2.19
LIMCH1-212ENST00000511424 TRAV23DV6A0A075B6W5 121 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 NDUFC1O43677 76 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 ZNF73O43830 326 aaPredicted RBP1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 COX7BP24311 80 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 SPRR1AP35321 89 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 RPL28P46779 137 aaKnown RBP1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 LINC00313P59037 77 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 COX17Q14061 63 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 ATP5EP2Q5VTU8 51 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 KCNQ1DNQ9H478 68 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 LINC00474Q9P2X8 69 aa1.35□□□□□ -2.19
LIMCH1-212ENST00000511424 TRAV7A0A075B6U4 112 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 TRAV13-2A0A0B4J235 113 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 A6NED7 52 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 A6NN06 94 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 BAALC-AS2P0C853 105 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 ELOF1P60002 83 aaKnown RBP1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 Q1T7F1 81 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 FAM229BQ4G0N7 80 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 Q6ZQY7 126 aa1.34□□□□□ -2.19
LIMCH1-212ENST00000511424 LRP2P98164 4655 aa1.34□□□□□ -2.2
LIMCH1-212ENST00000511424 ETDCA0A1B0GVM5 59 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms