RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 LINC00472Q9H8W2 130 aa5.53□□□□□ -1.52
POLR2J3-215ENST00000511313 KRTAP1-4P0C5Y4 121 aa5.51□□□□□ -1.53
POLR2J3-215ENST00000511313 SPINK7P58062 85 aa5.5□□□□□ -1.53
POLR2J3-215ENST00000511313 ANK3Q12955 4377 aaKnown RBP5.5□□□□□ -1.53
POLR2J3-215ENST00000511313 S4R3F8 94 aa5.48□□□□□ -1.53
POLR2J3-215ENST00000511313 COX7CP15954 63 aa5.47□□□□□ -1.53
POLR2J3-215ENST00000511313 Q8NDZ9 215 aa5.46□□□□□ -1.54
POLR2J3-215ENST00000511313 DMBT1Q9UGM3 2413 aaPredicted RBP5.46□□□□□ -1.54
POLR2J3-215ENST00000511313 NBEAL2Q6ZNJ1 2754 aa5.45□□□□□ -1.54
POLR2J3-215ENST00000511313 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
POLR2J3-215ENST00000511313 A0A087WVE0 104 aa5.44□□□□□ -1.54
POLR2J3-215ENST00000511313 SMIM26A0A096LP01 95 aa5.44□□□□□ -1.54
POLR2J3-215ENST00000511313 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
POLR2J3-215ENST00000511313 MMP24-AS1A0A0U1RRL7 71 aa5.43□□□□□ -1.54
POLR2J3-215ENST00000511313 A8MUU9 505 aa5.42□□□□□ -1.54
POLR2J3-215ENST00000511313 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
POLR2J3-215ENST00000511313 NF1P21359 2839 aa5.42□□□□□ -1.54
POLR2J3-215ENST00000511313 XP32Q5T750 250 aa5.41□□□□□ -1.54
POLR2J3-215ENST00000511313 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.54
POLR2J3-215ENST00000511313 KRTAP11-1Q8IUC1 163 aa5.4□□□□□ -1.55
POLR2J3-215ENST00000511313 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
POLR2J3-215ENST00000511313 TENM2Q9NT68 2774 aa5.38□□□□□ -1.55
POLR2J3-215ENST00000511313 KRTAP13-3Q3SY46 172 aa5.38□□□□□ -1.55
POLR2J3-215ENST00000511313 ANK2Q01484 3957 aa5.37□□□□□ -1.55
POLR2J3-215ENST00000511313 A0A0G2JQZ4 141 aa5.36□□□□□ -1.55
POLR2J3-215ENST00000511313 A0A1B0GU69 56 aa5.36□□□□□ -1.55
POLR2J3-215ENST00000511313 TENM3Q9P273 2699 aa5.36□□□□□ -1.55
POLR2J3-215ENST00000511313 Q8N9P0 234 aaPredicted RBP5.35□□□□□ -1.55
POLR2J3-215ENST00000511313 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
POLR2J3-215ENST00000511313 SNURFQ9Y675 71 aa5.33□□□□□ -1.56
POLR2J3-215ENST00000511313 Q5W150 140 aa5.32□□□□□ -1.56
POLR2J3-215ENST00000511313 PLAC4Q8WY50 150 aa5.32□□□□□ -1.56
POLR2J3-215ENST00000511313 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
POLR2J3-215ENST00000511313 FLG2Q5D862 2391 aaPredicted RBP5.31□□□□□ -1.56
POLR2J3-215ENST00000511313 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
POLR2J3-215ENST00000511313 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
POLR2J3-215ENST00000511313 ALMS1Q8TCU4 4167 aa5.29□□□□□ -1.56
POLR2J3-215ENST00000511313 CRIPTQ9P021 101 aa5.28□□□□□ -1.56
POLR2J3-215ENST00000511313 R4GN34 69 aa5.26□□□□□ -1.57
POLR2J3-215ENST00000511313 TENM1Q9UKZ4 2725 aa5.25□□□□□ -1.57
POLR2J3-215ENST00000511313 LCA10Q71F78 164 aa5.24□□□□□ -1.57
POLR2J3-215ENST00000511313 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
POLR2J3-215ENST00000511313 FBN1P35555 2871 aaKnown RBP5.21□□□□□ -1.57
POLR2J3-215ENST00000511313 MT1HL1P0DM35 61 aa5.21□□□□□ -1.57
POLR2J3-215ENST00000511313 DNAH3Q8TD57 4116 aa5.21□□□□□ -1.58
POLR2J3-215ENST00000511313 A6NED7 52 aa5.2□□□□□ -1.58
POLR2J3-215ENST00000511313 PKD1L1Q8TDX9 2849 aa5.19□□□□□ -1.58
POLR2J3-215ENST00000511313 KLKP1Q107X0 134 aa5.19□□□□□ -1.58
POLR2J3-215ENST00000511313 UQCR11O14957 56 aa5.18□□□□□ -1.58
POLR2J3-215ENST00000511313 COA5Q86WW8 74 aa5.18□□□□□ -1.58
POLR2J3-215ENST00000511313 TRRAPQ9Y4A5 3859 aa5.18□□□□□ -1.58
POLR2J3-215ENST00000511313 OCR1Q9BZK8 76 aa5.17□□□□□ -1.58
POLR2J3-215ENST00000511313 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
POLR2J3-215ENST00000511313 VWFP04275 2813 aa5.15□□□□□ -1.58
POLR2J3-215ENST00000511313 M0QZ58 72 aa5.14□□□□□ -1.59
POLR2J3-215ENST00000511313 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
POLR2J3-215ENST00000511313 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
POLR2J3-215ENST00000511313 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
POLR2J3-215ENST00000511313 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
POLR2J3-215ENST00000511313 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
POLR2J3-215ENST00000511313 PSPHP1O15172 72 aa5.08□□□□□ -1.6
POLR2J3-215ENST00000511313 A0A1B0GU33 70 aa5.06□□□□□ -1.6
POLR2J3-215ENST00000511313 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
POLR2J3-215ENST00000511313 LYSTQ99698 3801 aa5.06□□□□□ -1.6
POLR2J3-215ENST00000511313 HUWE1Q7Z6Z7 4374 aaKnown RBP5.06□□□□□ -1.6
POLR2J3-215ENST00000511313 H7BZZ5 65 aa5.04□□□□□ -1.6
POLR2J3-215ENST00000511313 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
POLR2J3-215ENST00000511313 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
POLR2J3-215ENST00000511313 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
POLR2J3-215ENST00000511313 DNAH1Q9P2D7 4330 aa5□□□□□ -1.61
POLR2J3-215ENST00000511313 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
POLR2J3-215ENST00000511313 KRTAP16-1A8MUX0 517 aa4.98□□□□□ -1.61
POLR2J3-215ENST00000511313 DNAH7Q8WXX0 4024 aa4.97□□□□□ -1.61
POLR2J3-215ENST00000511313 TGP01266 2768 aa4.96□□□□□ -1.61
POLR2J3-215ENST00000511313 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
POLR2J3-215ENST00000511313 PRKDCP78527 4128 aaKnown RBP4.94□□□□□ -1.62
POLR2J3-215ENST00000511313 COL7A1Q02388 2944 aa4.93□□□□□ -1.62
POLR2J3-215ENST00000511313 DNAH11Q96DT5 4516 aa4.92□□□□□ -1.62
POLR2J3-215ENST00000511313 Q5VV11 94 aa4.92□□□□□ -1.62
POLR2J3-215ENST00000511313 DNAH9Q9NYC9 4486 aa4.91□□□□□ -1.62
POLR2J3-215ENST00000511313 H0YAA0 97 aa4.9□□□□□ -1.62
POLR2J3-215ENST00000511313 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.62
POLR2J3-215ENST00000511313 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
POLR2J3-215ENST00000511313 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
POLR2J3-215ENST00000511313 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
POLR2J3-215ENST00000511313 A0A0D9SG42 100 aa4.87□□□□□ -1.63
POLR2J3-215ENST00000511313 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
POLR2J3-215ENST00000511313 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
POLR2J3-215ENST00000511313 DYNC2H1Q8NCM8 4307 aaKnown RBP4.86□□□□□ -1.63
POLR2J3-215ENST00000511313 Q1T7F1 81 aa4.84□□□□□ -1.63
POLR2J3-215ENST00000511313 TNP1P09430 55 aa4.77□□□□□ -1.65
POLR2J3-215ENST00000511313 A6NN06 94 aa4.77□□□□□ -1.65
POLR2J3-215ENST00000511313 STARD9Q9P2P6 4700 aa4.76□□□□□ -1.65
POLR2J3-215ENST00000511313 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
POLR2J3-215ENST00000511313 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
POLR2J3-215ENST00000511313 LRP1BQ9NZR2 4599 aa4.75□□□□□ -1.65
POLR2J3-215ENST00000511313 PLECQ15149 4684 aaKnown RBP4.73□□□□□ -1.65
POLR2J3-215ENST00000511313 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
POLR2J3-215ENST00000511313 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
POLR2J3-215ENST00000511313 HYDINQ4G0P3 5121 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms