RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 HRES1P13985 223 aa13.36□□□□□ -0.27
SNF8-208ENST00000510195 J3KT08 172 aa13.33□□□□□ -0.28
SNF8-208ENST00000510195 C9JAW5 83 aa13.3□□□□□ -0.28
SNF8-208ENST00000510195 BAALC-AS2P0C853 105 aa13.3□□□□□ -0.28
SNF8-208ENST00000510195 USH2AO75445 5202 aa13.28□□□□□ -0.28
SNF8-208ENST00000510195 Q6ZQT0 140 aa13.25□□□□□ -0.29
SNF8-208ENST00000510195 MTURNQ8N3F0 131 aa13.24□□□□□ -0.29
SNF8-208ENST00000510195 MT2AP02795 61 aa13.23□□□□□ -0.29
SNF8-208ENST00000510195 A0A1B0GW54 56 aa13.22□□□□□ -0.29
SNF8-208ENST00000510195 ZCCHC13Q8WW36 166 aaKnown RBP13.22□□□□□ -0.29
SNF8-208ENST00000510195 NDUFB1O75438 58 aa13.21□□□□□ -0.29
SNF8-208ENST00000510195 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
SNF8-208ENST00000510195 JMJD7-PLA2G4BH0Y9G9 81 aa13.19□□□□□ -0.3
SNF8-208ENST00000510195 SSPOA2VEC9 5147 aa13.18□□□□□ -0.3
SNF8-208ENST00000510195 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
SNF8-208ENST00000510195 ATXN8Q156A1 80 aa13.16□□□□□ -0.3
SNF8-208ENST00000510195 PDE6GP18545 87 aa13.14□□□□□ -0.31
SNF8-208ENST00000510195 SPINK7P58062 85 aa13.14□□□□□ -0.31
SNF8-208ENST00000510195 LOC110117498A0A087WWA1 95 aa13.13□□□□□ -0.31
SNF8-208ENST00000510195 M0R143 59 aa13.13□□□□□ -0.31
SNF8-208ENST00000510195 MT1FP04733 61 aa13.11□□□□□ -0.31
SNF8-208ENST00000510195 A8MWP4 228 aa13.1□□□□□ -0.31
SNF8-208ENST00000510195 KRTAP10-10P60014 251 aa13.08□□□□□ -0.32
SNF8-208ENST00000510195 C8orf17Q9NRJ1 99 aa13.08□□□□□ -0.32
SNF8-208ENST00000510195 KRTAP9-3Q9BYQ3 159 aa13.05□□□□□ -0.32
SNF8-208ENST00000510195 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.03□□□□□ -0.32
SNF8-208ENST00000510195 IGKV3D-7A0A0C4DH55 119 aa13.01□□□□□ -0.33
SNF8-208ENST00000510195 LYRM7Q5U5X0 104 aa13.01□□□□□ -0.33
SNF8-208ENST00000510195 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
SNF8-208ENST00000510195 LCE2BO14633 110 aa13□□□□□ -0.33
SNF8-208ENST00000510195 Q6ZVQ6 151 aa12.99□□□□□ -0.33
SNF8-208ENST00000510195 C14orf132Q9NPU4 83 aa12.98□□□□□ -0.33
SNF8-208ENST00000510195 PRR15Q8IV56 129 aa12.97□□□□□ -0.33
SNF8-208ENST00000510195 NREPQ16612 68 aa12.95□□□□□ -0.34
SNF8-208ENST00000510195 FCGBPQ9Y6R7 5405 aaPredicted RBP12.95□□□□□ -0.34
SNF8-208ENST00000510195 KRTAP9-7A8MTY7 169 aa12.93□□□□□ -0.34
SNF8-208ENST00000510195 WFDC13Q8IUB5 93 aa12.93□□□□□ -0.34
SNF8-208ENST00000510195 KRTAP19-1Q8IUB9 90 aa12.88□□□□□ -0.35
SNF8-208ENST00000510195 TMEM254Q8TBM7 123 aa12.88□□□□□ -0.35
SNF8-208ENST00000510195 SMIM6P0DI80 62 aa12.87□□□□□ -0.35
SNF8-208ENST00000510195 MRPL34Q9BQ48 92 aaKnown RBP12.86□□□□□ -0.35
SNF8-208ENST00000510195 MMP24-AS1A0A0U1RRL7 71 aa12.84□□□□□ -0.35
SNF8-208ENST00000510195 hDV103S1A0JD37 113 aa12.79□□□□□ -0.36
SNF8-208ENST00000510195 TSTD3H0UI37 97 aa12.77□□□□□ -0.37
SNF8-208ENST00000510195 H3BT86 120 aa12.77□□□□□ -0.37
SNF8-208ENST00000510195 K7EQZ3 153 aa12.75□□□□□ -0.37
SNF8-208ENST00000510195 LINC00846Q9NV44 126 aa12.74□□□□□ -0.37
SNF8-208ENST00000510195 BATFQ16520 125 aa12.73□□□□□ -0.37
SNF8-208ENST00000510195 H1FX-AS1Q4G0G2 97 aa12.72□□□□□ -0.37
SNF8-208ENST00000510195 NDUFS5O43920 106 aa12.71□□□□□ -0.37
SNF8-208ENST00000510195 C9orf118A6NHY6 69 aa12.7□□□□□ -0.38
SNF8-208ENST00000510195 BPY2O14599 106 aa12.68□□□□□ -0.38
SNF8-208ENST00000510195 A0A1W2PPM0 123 aa12.65□□□□□ -0.38
SNF8-208ENST00000510195 KRTAP19-6Q3LI70 58 aa12.65□□□□□ -0.38
SNF8-208ENST00000510195 TAX1BP3O14907 124 aa12.61□□□□□ -0.39
SNF8-208ENST00000510195 C7orf65Q6ZTY9 151 aa12.61□□□□□ -0.39
SNF8-208ENST00000510195 IGKV2D-30A0A075B6S6 120 aa12.59□□□□□ -0.39
SNF8-208ENST00000510195 IGKV2-30P06310 120 aa12.59□□□□□ -0.39
SNF8-208ENST00000510195 MACF1Q9UPN3 7388 aaKnown RBP12.57□□□□□ -0.4
SNF8-208ENST00000510195 Q5W150 140 aa12.57□□□□□ -0.4
SNF8-208ENST00000510195 CASC2Q6XLA1 102 aa12.54□□□□□ -0.4
SNF8-208ENST00000510195 HCG22E2RYF7 251 aa12.48□□□□□ -0.41
SNF8-208ENST00000510195 CXCL6P80162 114 aa12.48□□□□□ -0.41
SNF8-208ENST00000510195 Q8N9L7 120 aa12.48□□□□□ -0.41
SNF8-208ENST00000510195 SYNE2Q8WXH0 6885 aaKnown RBP12.46□□□□□ -0.41
SNF8-208ENST00000510195 SPCS1Q9Y6A9 102 aa12.44□□□□□ -0.42
SNF8-208ENST00000510195 C4orf26Q17RF5 130 aa12.4□□□□□ -0.42
SNF8-208ENST00000510195 SMCPP49901 116 aaPredicted RBP12.38□□□□□ -0.43
SNF8-208ENST00000510195 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
SNF8-208ENST00000510195 UBL5Q9BZL1 73 aa12.37□□□□□ -0.43
SNF8-208ENST00000510195 PRO0461Q9UI25 63 aa12.26□□□□□ -0.45
SNF8-208ENST00000510195 COL5A1-AS1Q5SY13 56 aa12.24□□□□□ -0.45
SNF8-208ENST00000510195 C5orf47Q569G3 176 aa12.22□□□□□ -0.45
SNF8-208ENST00000510195 KRTAP3-1Q9BYR8 98 aa12.21□□□□□ -0.45
SNF8-208ENST00000510195 TP53AIP1Q9HCN2 124 aa12.2□□□□□ -0.46
SNF8-208ENST00000510195 K7EP34 96 aa12.19□□□□□ -0.46
SNF8-208ENST00000510195 S4R3F8 94 aa12.19□□□□□ -0.46
SNF8-208ENST00000510195 CSAG1Q6PB30 78 aa12.17□□□□□ -0.46
SNF8-208ENST00000510195 C1orf64Q8NEQ6 169 aa12.17□□□□□ -0.46
SNF8-208ENST00000510195 FAM236AA0A1B0GUQ0 79 aa12.16□□□□□ -0.46
SNF8-208ENST00000510195 FAM236BA0A1B0GV22 79 aa12.16□□□□□ -0.46
SNF8-208ENST00000510195 KRTAP6-3Q3LI67 103 aa12.16□□□□□ -0.46
SNF8-208ENST00000510195 LCA10Q71F78 164 aa12.09□□□□□ -0.47
SNF8-208ENST00000510195 GTF2H5Q6ZYL4 71 aa12.04□□□□□ -0.48
SNF8-208ENST00000510195 SPRR2GQ9BYE4 73 aa12.04□□□□□ -0.48
SNF8-208ENST00000510195 F8W1H4 67 aa12.02□□□□□ -0.49
SNF8-208ENST00000510195 Q5VV11 94 aa12.01□□□□□ -0.49
SNF8-208ENST00000510195 MT1BP07438 61 aa11.99□□□□□ -0.49
SNF8-208ENST00000510195 KRTAP19-8Q3LI54 63 aa11.99□□□□□ -0.49
SNF8-208ENST00000510195 A6NN06 94 aa11.97□□□□□ -0.49
SNF8-208ENST00000510195 ETDBQ3ZM63 59 aa11.94□□□□□ -0.5
SNF8-208ENST00000510195 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
SNF8-208ENST00000510195 KLKP1Q107X0 134 aa11.93□□□□□ -0.5
SNF8-208ENST00000510195 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
SNF8-208ENST00000510195 TRAV22A0A0B4J277 110 aa11.86□□□□□ -0.51
SNF8-208ENST00000510195 LOC101927531A0A1B0GV80 90 aa11.85□□□□□ -0.51
SNF8-208ENST00000510195 CRIPTQ9P021 101 aa11.82□□□□□ -0.52
SNF8-208ENST00000510195 KRTAP10-5P60370 271 aa11.8□□□□□ -0.52
SNF8-208ENST00000510195 ACYP1P07311 99 aa11.79□□□□□ -0.52
SNF8-208ENST00000510195 NEBP20929 6669 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms