RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 A8MU10 97 aa6.49□□□□□ -1.37
SEC31A-228ENST00000509142 A0A087X002 238 aa6.48□□□□□ -1.37
SEC31A-228ENST00000509142 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
SEC31A-228ENST00000509142 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
SEC31A-228ENST00000509142 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
SEC31A-228ENST00000509142 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
SEC31A-228ENST00000509142 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
SEC31A-228ENST00000509142 A8MUN3 132 aa6.47□□□□□ -1.37
SEC31A-228ENST00000509142 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
SEC31A-228ENST00000509142 PCOTHQ58A44 107 aa6.46□□□□□ -1.38
SEC31A-228ENST00000509142 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
SEC31A-228ENST00000509142 CD164Q04900 197 aa6.44□□□□□ -1.38
SEC31A-228ENST00000509142 Q5VV11 94 aa6.44□□□□□ -1.38
SEC31A-228ENST00000509142 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
SEC31A-228ENST00000509142 IGLV7-46A0A075B6I9 117 aa6.41□□□□□ -1.38
SEC31A-228ENST00000509142 Q6ZSA8 131 aa6.4□□□□□ -1.38
SEC31A-228ENST00000509142 LRP1BQ9NZR2 4599 aa6.39□□□□□ -1.39
SEC31A-228ENST00000509142 COA5Q86WW8 74 aa6.39□□□□□ -1.39
SEC31A-228ENST00000509142 C4orf48Q5BLP8 95 aa6.38□□□□□ -1.39
SEC31A-228ENST00000509142 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
SEC31A-228ENST00000509142 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
SEC31A-228ENST00000509142 LINC00313P59037 77 aa6.36□□□□□ -1.39
SEC31A-228ENST00000509142 C1orf195Q5TG92 126 aa6.36□□□□□ -1.39
SEC31A-228ENST00000509142 Q5W150 140 aa6.36□□□□□ -1.39
SEC31A-228ENST00000509142 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
SEC31A-228ENST00000509142 PKD1P98161 4303 aa6.35□□□□□ -1.39
SEC31A-228ENST00000509142 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
SEC31A-228ENST00000509142 V9GYY9 64 aa6.35□□□□□ -1.39
SEC31A-228ENST00000509142 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.39
SEC31A-228ENST00000509142 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
SEC31A-228ENST00000509142 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
SEC31A-228ENST00000509142 KRTAP21-3Q3LHN1 58 aa6.33□□□□□ -1.4
SEC31A-228ENST00000509142 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
SEC31A-228ENST00000509142 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
SEC31A-228ENST00000509142 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
SEC31A-228ENST00000509142 HRES1P13985 223 aa6.32□□□□□ -1.4
SEC31A-228ENST00000509142 FAT2Q9NYQ8 4349 aa6.31□□□□□ -1.4
SEC31A-228ENST00000509142 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
SEC31A-228ENST00000509142 LCA10Q71F78 164 aa6.3□□□□□ -1.4
SEC31A-228ENST00000509142 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
SEC31A-228ENST00000509142 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
SEC31A-228ENST00000509142 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
SEC31A-228ENST00000509142 Q75L30 129 aa6.27□□□□□ -1.41
SEC31A-228ENST00000509142 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
SEC31A-228ENST00000509142 SMR3BP02814 79 aaPredicted RBP6.26□□□□□ -1.41
SEC31A-228ENST00000509142 SPINK1P00995 79 aa6.25□□□□□ -1.41
SEC31A-228ENST00000509142 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
SEC31A-228ENST00000509142 PRR26Q8N8Z3 221 aa6.24□□□□□ -1.41
SEC31A-228ENST00000509142 LINC00304Q8N9R0 145 aa6.22□□□□□ -1.41
SEC31A-228ENST00000509142 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
SEC31A-228ENST00000509142 SPINK7P58062 85 aa6.21□□□□□ -1.42
SEC31A-228ENST00000509142 A6NED7 52 aa6.2□□□□□ -1.42
SEC31A-228ENST00000509142 ACYP2P14621 99 aa6.2□□□□□ -1.42
SEC31A-228ENST00000509142 IGKV2D-30A0A075B6S6 120 aa6.2□□□□□ -1.42
SEC31A-228ENST00000509142 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
SEC31A-228ENST00000509142 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
SEC31A-228ENST00000509142 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
SEC31A-228ENST00000509142 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
SEC31A-228ENST00000509142 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
SEC31A-228ENST00000509142 SACSQ9NZJ4 4579 aa6.15□□□□□ -1.43
SEC31A-228ENST00000509142 A6NN06 94 aa6.14□□□□□ -1.43
SEC31A-228ENST00000509142 ATP11AUNQ6ZP68 121 aa6.13□□□□□ -1.43
SEC31A-228ENST00000509142 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
SEC31A-228ENST00000509142 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
SEC31A-228ENST00000509142 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
SEC31A-228ENST00000509142 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
SEC31A-228ENST00000509142 SEC61GP60059 68 aa6.1□□□□□ -1.43
SEC31A-228ENST00000509142 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
SEC31A-228ENST00000509142 C9orf92A6NGG3 77 aa6.09□□□□□ -1.43
SEC31A-228ENST00000509142 FAT1Q14517 4588 aa6.07□□□□□ -1.44
SEC31A-228ENST00000509142 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
SEC31A-228ENST00000509142 A0A1B0GU69 56 aa6.02□□□□□ -1.45
SEC31A-228ENST00000509142 Q8N1X5 172 aa6.01□□□□□ -1.45
SEC31A-228ENST00000509142 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
SEC31A-228ENST00000509142 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
SEC31A-228ENST00000509142 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
SEC31A-228ENST00000509142 RBM12B-AS1Q9P1G2 102 aa5.98□□□□□ -1.45
SEC31A-228ENST00000509142 A8MUU9 505 aa5.96□□□□□ -1.46
SEC31A-228ENST00000509142 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.46
SEC31A-228ENST00000509142 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
SEC31A-228ENST00000509142 RYR2Q92736 4967 aa5.94□□□□□ -1.46
SEC31A-228ENST00000509142 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
SEC31A-228ENST00000509142 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
SEC31A-228ENST00000509142 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
SEC31A-228ENST00000509142 Q5VSD8 79 aa5.92□□□□□ -1.46
SEC31A-228ENST00000509142 KMT2CQ8NEZ4 4911 aaKnown RBP5.91□□□□□ -1.46
SEC31A-228ENST00000509142 PRAC1Q96KF2 57 aa5.9□□□□□ -1.47
SEC31A-228ENST00000509142 UQCR11O14957 56 aa5.89□□□□□ -1.47
SEC31A-228ENST00000509142 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
SEC31A-228ENST00000509142 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
SEC31A-228ENST00000509142 KRTAP10-8P60410 259 aa5.84□□□□□ -1.47
SEC31A-228ENST00000509142 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
SEC31A-228ENST00000509142 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
SEC31A-228ENST00000509142 COX6B2Q6YFQ2 88 aa5.79□□□□□ -1.48
SEC31A-228ENST00000509142 HSPG2P98160 4391 aa5.79□□□□□ -1.48
SEC31A-228ENST00000509142 TNXBP22105 4242 aa5.77□□□□□ -1.48
SEC31A-228ENST00000509142 H0YAA0 97 aa5.77□□□□□ -1.49
SEC31A-228ENST00000509142 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
SEC31A-228ENST00000509142 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
SEC31A-228ENST00000509142 XP32Q5T750 250 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms