RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 FLNBO75369 2602 aaKnown RBP0.3□□□□□ -2.36
DEPDC1B-204ENST00000509006 PKD1L2Q7Z442 2459 aa0.29□□□□□ -2.36
DEPDC1B-204ENST00000509006 NFAT5O94916 1531 aa0.29□□□□□ -2.36
DEPDC1B-204ENST00000509006 HRNRQ86YZ3 2850 aaPredicted RBP0.29□□□□□ -2.36
DEPDC1B-204ENST00000509006 MAST4O15021 2626 aa0.29□□□□□ -2.36
DEPDC1B-204ENST00000509006 MYCBP2O75592 4640 aa0.28□□□□□ -2.36
DEPDC1B-204ENST00000509006 MAP1BP46821 2468 aaKnown RBP0.28□□□□□ -2.36
DEPDC1B-204ENST00000509006 CACNA1AO00555 2505 aa0.28□□□□□ -2.36
DEPDC1B-204ENST00000509006 SPRR2AP35326 72 aa0.28□□□□□ -2.36
DEPDC1B-204ENST00000509006 TNRC18O15417 2968 aaPredicted RBP0.28□□□□□ -2.36
DEPDC1B-204ENST00000509006 PRKDCP78527 4128 aaKnown RBP0.27□□□□□ -2.37
DEPDC1B-204ENST00000509006 DEFB110Q30KQ9 67 aa0.27□□□□□ -2.37
DEPDC1B-204ENST00000509006 NBASA2RRP1 2371 aa0.27□□□□□ -2.37
DEPDC1B-204ENST00000509006 LRP1Q07954 4544 aaKnown RBP0.27□□□□□ -2.37
DEPDC1B-204ENST00000509006 NF1P21359 2839 aa0.26□□□□□ -2.37
DEPDC1B-204ENST00000509006 DCHS2Q6V1P9 2916 aa0.26□□□□□ -2.37
DEPDC1B-204ENST00000509006 SPTBN4Q9H254 2564 aa0.25□□□□□ -2.37
DEPDC1B-204ENST00000509006 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
DEPDC1B-204ENST00000509006 CELSR1Q9NYQ6 3014 aa0.25□□□□□ -2.37
DEPDC1B-204ENST00000509006 FLNAP21333 2647 aaKnown RBP0.25□□□□□ -2.37
DEPDC1B-204ENST00000509006 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
DEPDC1B-204ENST00000509006 FAT2Q9NYQ8 4349 aa0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 KMT2DO14686 5537 aa0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 NSD1Q96L73 2696 aaPredicted RBP0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 BSNQ9UPA5 3926 aa0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 SRRM2Q9UQ35 2752 aaKnown RBP0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 FLNCQ14315 2725 aa0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 KMT2AQ03164 3969 aa0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 MTORP42345 2549 aa0.24□□□□□ -2.37
DEPDC1B-204ENST00000509006 A0A0C4DFX4 3053 aa0.23□□□□□ -2.37
DEPDC1B-204ENST00000509006 MUC5ACP98088 5654 aa0.23□□□□□ -2.37
DEPDC1B-204ENST00000509006 PHGR1C9JFL3 82 aa0.23□□□□□ -2.37
DEPDC1B-204ENST00000509006 CLPSL2Q6UWE3 100 aa0.23□□□□□ -2.37
DEPDC1B-204ENST00000509006 LPAP08519 4548 aa0.22□□□□□ -2.37
DEPDC1B-204ENST00000509006 MT1AP04731 61 aa0.22□□□□□ -2.37
DEPDC1B-204ENST00000509006 POLR2KP53803 58 aaKnown RBP0.22□□□□□ -2.37
DEPDC1B-204ENST00000509006 SNRPGP62308 76 aaKnown RBP0.22□□□□□ -2.37
DEPDC1B-204ENST00000509006 ANKRD11Q6UB99 2663 aaPredicted RBP0.22□□□□□ -2.37
DEPDC1B-204ENST00000509006 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
DEPDC1B-204ENST00000509006 SPART-AS1P0CW21 52 aa0.21□□□□□ -2.38
DEPDC1B-204ENST00000509006 GCN1Q92616 2671 aaKnown RBP0.21□□□□□ -2.38
DEPDC1B-204ENST00000509006 GPR98Q8WXG9 6306 aa0.21□□□□□ -2.38
DEPDC1B-204ENST00000509006 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
DEPDC1B-204ENST00000509006 SETD2Q9BYW2 2564 aaPredicted RBP0.2□□□□□ -2.38
DEPDC1B-204ENST00000509006 SPRR2EP22531 72 aa0.2□□□□□ -2.38
DEPDC1B-204ENST00000509006 ZZEF1O43149 2961 aa0.2□□□□□ -2.38
DEPDC1B-204ENST00000509006 SONP18583 2426 aaKnown RBP0.19□□□□□ -2.38
DEPDC1B-204ENST00000509006 SPG11Q96JI7 2443 aa0.19□□□□□ -2.38
DEPDC1B-204ENST00000509006 ACACAQ13085 2346 aa0.19□□□□□ -2.38
DEPDC1B-204ENST00000509006 TGP01266 2768 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 LRRK2Q5S007 2527 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 PDZD2O15018 2839 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 KRTAP6-2Q3LI66 62 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 DMXL1Q9Y485 3027 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 COL6A3P12111 3177 aa0.18□□□□□ -2.38
DEPDC1B-204ENST00000509006 UTP20O75691 2785 aaKnown RBP0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 HIVEP1P15822 2718 aa0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 MROH2BQ7Z745 1585 aa0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 NBEAQ8NFP9 2946 aa0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 TACC2O95359 2948 aa0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 TENM2Q9NT68 2774 aa0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 PKD1P98161 4303 aa0.17□□□□□ -2.38
DEPDC1B-204ENST00000509006 DUOX1Q9NRD9 1551 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 SPRR2FQ96RM1 72 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 LYSTQ99698 3801 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 TOMM7Q9P0U1 55 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 GCC2Q8IWJ2 1684 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 COL6A5A8TX70 2615 aa0.16□□□□□ -2.38
DEPDC1B-204ENST00000509006 HMCN2Q8NDA2 5059 aa0.15□□□□□ -2.38
DEPDC1B-204ENST00000509006 TEP1Q99973 2627 aaKnown RBP0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 FAM186AA6NE01 2351 aa0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 MAP1AP78559 2803 aaPredicted RBP0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 EPG5Q9HCE0 2579 aa0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 STAB1Q9NY15 2570 aa0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 NBEAL2Q6ZNJ1 2754 aa0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 ANKHD1Q8IWZ3 2542 aaKnown RBP0.15□□□□□ -2.39
DEPDC1B-204ENST00000509006 STAB2Q8WWQ8 2551 aa0.14□□□□□ -2.39
DEPDC1B-204ENST00000509006 HSPG2P98160 4391 aa0.14□□□□□ -2.39
DEPDC1B-204ENST00000509006 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
DEPDC1B-204ENST00000509006 RPL39P62891 51 aaKnown RBP0.14□□□□□ -2.39
DEPDC1B-204ENST00000509006 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
DEPDC1B-204ENST00000509006 RIF1Q5UIP0 2472 aaKnown RBP0.13□□□□□ -2.39
DEPDC1B-204ENST00000509006 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
DEPDC1B-204ENST00000509006 ACACBO00763 2458 aa0.13□□□□□ -2.39
DEPDC1B-204ENST00000509006 HTTP42858 3142 aa0.13□□□□□ -2.39
DEPDC1B-204ENST00000509006 LINC01590Q5TEZ4 76 aa0.12□□□□□ -2.39
DEPDC1B-204ENST00000509006 FASNP49327 2511 aaKnown RBP0.12□□□□□ -2.39
DEPDC1B-204ENST00000509006 KALRNO60229 2985 aa0.12□□□□□ -2.39
DEPDC1B-204ENST00000509006 MXRA5Q9NR99 2828 aa0.11□□□□□ -2.39
DEPDC1B-204ENST00000509006 DEFB1P60022 68 aa0.11□□□□□ -2.39
DEPDC1B-204ENST00000509006 SACSQ9NZJ4 4579 aa0.11□□□□□ -2.39
DEPDC1B-204ENST00000509006 VPS13BQ7Z7G8 4022 aa0.11□□□□□ -2.39
DEPDC1B-204ENST00000509006 HECTD4Q9Y4D8 3996 aa0.11□□□□□ -2.39
DEPDC1B-204ENST00000509006 MGAM2Q2M2H8 2515 aa0.1□□□□□ -2.39
DEPDC1B-204ENST00000509006 LRP1BQ9NZR2 4599 aa0.1□□□□□ -2.39
DEPDC1B-204ENST00000509006 PKHD1P08F94 4074 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms