RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 M0R2N4 97 aa2.19□□□□□ -2.06
NEDD4-209ENST00000508871 CHD8Q9HCK8 2581 aa2.19□□□□□ -2.06
NEDD4-209ENST00000508871 P0C880 135 aa2.18□□□□□ -2.06
NEDD4-209ENST00000508871 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
NEDD4-209ENST00000508871 USP9YO00507 2555 aaPredicted RBP2.18□□□□□ -2.06
NEDD4-209ENST00000508871 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
NEDD4-209ENST00000508871 WNK1Q9H4A3 2382 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 ABCA12Q86UK0 2595 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 NAV2Q8IVL1 2488 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 VPS13DQ5THJ4 4388 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 IGLV5-48A0A075B6I7 105 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 DNAH10Q8IVF4 4471 aa2.17□□□□□ -2.06
NEDD4-209ENST00000508871 TPRXLQ17RH7 258 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 KRTAP1-5Q9BYS1 174 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 TEX15Q9BXT5 2789 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 A0A087WTM6 91 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 RP1L1Q8IWN7 2480 aaPredicted RBP2.16□□□□□ -2.06
NEDD4-209ENST00000508871 HIVEP2P31629 2446 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 SPINK1P00995 79 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 SPRR1BP22528 89 aa2.16□□□□□ -2.06
NEDD4-209ENST00000508871 PLAC8Q9NZF1 115 aa2.15□□□□□ -2.06
NEDD4-209ENST00000508871 FLNCQ14315 2725 aa2.15□□□□□ -2.06
NEDD4-209ENST00000508871 A0A096LNI7 61 aa2.15□□□□□ -2.07
NEDD4-209ENST00000508871 FLNAP21333 2647 aaKnown RBP2.15□□□□□ -2.07
NEDD4-209ENST00000508871 HECTD4Q9Y4D8 3996 aa2.15□□□□□ -2.07
NEDD4-209ENST00000508871 XP32Q5T750 250 aa2.15□□□□□ -2.07
NEDD4-209ENST00000508871 DNAH2Q9P225 4427 aa2.15□□□□□ -2.07
NEDD4-209ENST00000508871 NBASA2RRP1 2371 aa2.14□□□□□ -2.07
NEDD4-209ENST00000508871 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
NEDD4-209ENST00000508871 UNC79Q9P2D8 2635 aa2.14□□□□□ -2.07
NEDD4-209ENST00000508871 COL12A1Q99715 3063 aa2.14□□□□□ -2.07
NEDD4-209ENST00000508871 MXRA5Q9NR99 2828 aa2.14□□□□□ -2.07
NEDD4-209ENST00000508871 SPRR4Q96PI1 79 aa2.14□□□□□ -2.07
NEDD4-209ENST00000508871 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
NEDD4-209ENST00000508871 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
NEDD4-209ENST00000508871 LYSTQ99698 3801 aa2.12□□□□□ -2.07
NEDD4-209ENST00000508871 GCN1Q92616 2671 aaKnown RBP2.12□□□□□ -2.07
NEDD4-209ENST00000508871 CSPG4Q6UVK1 2322 aa2.12□□□□□ -2.07
NEDD4-209ENST00000508871 NSD1Q96L73 2696 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-209ENST00000508871 SPTAN1Q13813 2472 aaKnown RBP2.11□□□□□ -2.07
NEDD4-209ENST00000508871 BAHCC1Q9P281 2608 aa2.11□□□□□ -2.07
NEDD4-209ENST00000508871 Q6ZSA8 131 aa2.11□□□□□ -2.07
NEDD4-209ENST00000508871 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
NEDD4-209ENST00000508871 PKHD1P08F94 4074 aa2.1□□□□□ -2.07
NEDD4-209ENST00000508871 LCE6AA0A183 80 aa2.09□□□□□ -2.07
NEDD4-209ENST00000508871 NIPBLQ6KC79 2804 aaeCLIP2.09□□□□□ -2.07
NEDD4-209ENST00000508871 RPL37P61927 97 aaKnown RBP2.09□□□□□ -2.07
NEDD4-209ENST00000508871 FASNP49327 2511 aaKnown RBP2.09□□□□□ -2.08
NEDD4-209ENST00000508871 EPG5Q9HCE0 2579 aa2.09□□□□□ -2.08
NEDD4-209ENST00000508871 PTPN13Q12923 2485 aa2.08□□□□□ -2.08
NEDD4-209ENST00000508871 HIVEP1P15822 2718 aa2.08□□□□□ -2.08
NEDD4-209ENST00000508871 TEP1Q99973 2627 aaKnown RBP2.08□□□□□ -2.08
NEDD4-209ENST00000508871 HELZ2Q9BYK8 2649 aaKnown RBP2.08□□□□□ -2.08
NEDD4-209ENST00000508871 ZANQ9Y493 2812 aa2.08□□□□□ -2.08
NEDD4-209ENST00000508871 K7EQZ3 153 aa2.08□□□□□ -2.08
NEDD4-209ENST00000508871 RPS29P62273 56 aaKnown RBP2.07□□□□□ -2.08
NEDD4-209ENST00000508871 SETXQ7Z333 2677 aaKnown RBP2.07□□□□□ -2.08
NEDD4-209ENST00000508871 PLECQ15149 4684 aaKnown RBP2.07□□□□□ -2.08
NEDD4-209ENST00000508871 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
NEDD4-209ENST00000508871 CHD6Q8TD26 2715 aa2.07□□□□□ -2.08
NEDD4-209ENST00000508871 A0A1B0GVY2 172 aa2.07□□□□□ -2.08
NEDD4-209ENST00000508871 SACSQ9NZJ4 4579 aa2.07□□□□□ -2.08
NEDD4-209ENST00000508871 LRRK2Q5S007 2527 aa2.07□□□□□ -2.08
NEDD4-209ENST00000508871 FBN1P35555 2871 aaKnown RBP2.07□□□□□ -2.08
NEDD4-209ENST00000508871 MYO9AB2RTY4 2548 aa2.06□□□□□ -2.08
NEDD4-209ENST00000508871 H1FX-AS1Q4G0G2 97 aa2.06□□□□□ -2.08
NEDD4-209ENST00000508871 PKD1P98161 4303 aa2.06□□□□□ -2.08
NEDD4-209ENST00000508871 ITPR2Q14571 2701 aa2.06□□□□□ -2.08
NEDD4-209ENST00000508871 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
NEDD4-209ENST00000508871 POLQO75417 2590 aa2.06□□□□□ -2.08
NEDD4-209ENST00000508871 SPINK6Q6UWN8 80 aa2.05□□□□□ -2.08
NEDD4-209ENST00000508871 COX6B2Q6YFQ2 88 aa2.05□□□□□ -2.08
NEDD4-209ENST00000508871 MAP1AP78559 2803 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-209ENST00000508871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-209ENST00000508871 KRTAP10-2P60368 255 aa2.04□□□□□ -2.08
NEDD4-209ENST00000508871 CENPEQ02224 2701 aa2.04□□□□□ -2.08
NEDD4-209ENST00000508871 VPS13BQ7Z7G8 4022 aa2.04□□□□□ -2.08
NEDD4-209ENST00000508871 LINC00472Q9H8W2 130 aa2.04□□□□□ -2.08
NEDD4-209ENST00000508871 KRTAP10-1P60331 282 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 LOC100996750A0A140TA64 210 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 KRTAP4-6Q9BYQ5 205 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 SPG11Q96JI7 2443 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 KRTAP13-2Q52LG2 175 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 NF1P21359 2839 aa2.03□□□□□ -2.08
NEDD4-209ENST00000508871 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.09
NEDD4-209ENST00000508871 ZFYVE26Q68DK2 2539 aa2.02□□□□□ -2.09
NEDD4-209ENST00000508871 NOTCH2Q04721 2471 aa2.01□□□□□ -2.09
NEDD4-209ENST00000508871 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
NEDD4-209ENST00000508871 SONP18583 2426 aaKnown RBP2.01□□□□□ -2.09
NEDD4-209ENST00000508871 A0A0D9SG42 100 aa2□□□□□ -2.09
NEDD4-209ENST00000508871 ZCCHC13Q8WW36 166 aaKnown RBP2□□□□□ -2.09
NEDD4-209ENST00000508871 DYNC1H1Q14204 4646 aaKnown RBP2□□□□□ -2.09
NEDD4-209ENST00000508871 MAST4O15021 2626 aa2□□□□□ -2.09
NEDD4-209ENST00000508871 TLN2Q9Y4G6 2542 aa2□□□□□ -2.09
NEDD4-209ENST00000508871 KRTAP1-4P0C5Y4 121 aa1.99□□□□□ -2.09
NEDD4-209ENST00000508871 ACANP16112 2415 aa1.99□□□□□ -2.09
NEDD4-209ENST00000508871 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
NEDD4-209ENST00000508871 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms