RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 LINC01556Q5JQF7 62 aa4.43□□□□□ -1.7
CAST-222ENST00000508579 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
CAST-222ENST00000508579 TLN1Q9Y490 2541 aaKnown RBP4.43□□□□□ -1.7
CAST-222ENST00000508579 LRBAP50851 2863 aa4.42□□□□□ -1.7
CAST-222ENST00000508579 ABCA12Q86UK0 2595 aa4.41□□□□□ -1.7
CAST-222ENST00000508579 AKAP6Q13023 2319 aa4.41□□□□□ -1.7
CAST-222ENST00000508579 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
CAST-222ENST00000508579 C2CD3Q4AC94 2353 aa4.41□□□□□ -1.7
CAST-222ENST00000508579 BSNQ9UPA5 3926 aa4.39□□□□□ -1.71
CAST-222ENST00000508579 ITPR3Q14573 2671 aa4.39□□□□□ -1.71
CAST-222ENST00000508579 FLG2Q5D862 2391 aaPredicted RBP4.39□□□□□ -1.71
CAST-222ENST00000508579 UBR5O95071 2799 aaPredicted RBP4.38□□□□□ -1.71
CAST-222ENST00000508579 CSMD1Q96PZ7 3565 aa4.38□□□□□ -1.71
CAST-222ENST00000508579 K7EIL1 84 aa4.37□□□□□ -1.71
CAST-222ENST00000508579 PRLHP81277 87 aa4.37□□□□□ -1.71
CAST-222ENST00000508579 DEFB135Q30KP9 77 aa4.37□□□□□ -1.71
CAST-222ENST00000508579 BOD1L1Q8NFC6 3051 aa4.37□□□□□ -1.71
CAST-222ENST00000508579 COL12A1Q99715 3063 aa4.37□□□□□ -1.71
CAST-222ENST00000508579 NBPF19A0A087WUL8 3843 aa4.36□□□□□ -1.71
CAST-222ENST00000508579 J3QKU1 62 aa4.35□□□□□ -1.71
CAST-222ENST00000508579 HTN3P15516 51 aa4.35□□□□□ -1.71
CAST-222ENST00000508579 FBN2P35556 2912 aa4.35□□□□□ -1.71
CAST-222ENST00000508579 KRTAP10-2P60368 255 aa4.35□□□□□ -1.71
CAST-222ENST00000508579 MAPK1IP1LQ8NDC0 245 aa4.35□□□□□ -1.71
CAST-222ENST00000508579 MAP1AP78559 2803 aaPredicted RBP4.34□□□□□ -1.71
CAST-222ENST00000508579 HIVEP3Q5T1R4 2406 aa4.34□□□□□ -1.71
CAST-222ENST00000508579 NOTCH2Q04721 2471 aa4.34□□□□□ -1.72
CAST-222ENST00000508579 ATMQ13315 3056 aa4.33□□□□□ -1.72
CAST-222ENST00000508579 RELNP78509 3460 aa4.33□□□□□ -1.72
CAST-222ENST00000508579 CSPG4Q6UVK1 2322 aa4.33□□□□□ -1.72
CAST-222ENST00000508579 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
CAST-222ENST00000508579 CELSR1Q9NYQ6 3014 aa4.32□□□□□ -1.72
CAST-222ENST00000508579 NOTCH3Q9UM47 2321 aa4.32□□□□□ -1.72
CAST-222ENST00000508579 LRRK2Q5S007 2527 aa4.31□□□□□ -1.72
CAST-222ENST00000508579 FLNCQ14315 2725 aa4.31□□□□□ -1.72
CAST-222ENST00000508579 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
CAST-222ENST00000508579 DEFB4AO15263 64 aa4.3□□□□□ -1.72
CAST-222ENST00000508579 FBN3Q75N90 2809 aa4.3□□□□□ -1.72
CAST-222ENST00000508579 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
CAST-222ENST00000508579 SPINK1P00995 79 aa4.28□□□□□ -1.72
CAST-222ENST00000508579 USP9YO00507 2555 aaPredicted RBP4.28□□□□□ -1.72
CAST-222ENST00000508579 ITPR2Q14571 2701 aa4.28□□□□□ -1.72
CAST-222ENST00000508579 POLQO75417 2590 aa4.26□□□□□ -1.73
CAST-222ENST00000508579 SETD2Q9BYW2 2564 aaPredicted RBP4.25□□□□□ -1.73
CAST-222ENST00000508579 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
CAST-222ENST00000508579 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
CAST-222ENST00000508579 UTP20O75691 2785 aaKnown RBP4.24□□□□□ -1.73
CAST-222ENST00000508579 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
CAST-222ENST00000508579 TLN2Q9Y4G6 2542 aa4.23□□□□□ -1.73
CAST-222ENST00000508579 NBASA2RRP1 2371 aa4.22□□□□□ -1.73
CAST-222ENST00000508579 CENPEQ02224 2701 aa4.22□□□□□ -1.73
CAST-222ENST00000508579 NF1P21359 2839 aa4.21□□□□□ -1.73
CAST-222ENST00000508579 F8P00451 2351 aa4.21□□□□□ -1.74
CAST-222ENST00000508579 FN1P02751 2386 aaKnown RBP4.2□□□□□ -1.74
CAST-222ENST00000508579 KRTAP10-3P60369 221 aa4.19□□□□□ -1.74
CAST-222ENST00000508579 S4R3F8 94 aa4.19□□□□□ -1.74
CAST-222ENST00000508579 SPG11Q96JI7 2443 aa4.19□□□□□ -1.74
CAST-222ENST00000508579 A0A096LNI7 61 aa4.19□□□□□ -1.74
CAST-222ENST00000508579 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
CAST-222ENST00000508579 OTOGQ6ZRI0 2925 aa4.18□□□□□ -1.74
CAST-222ENST00000508579 SVEP1Q4LDE5 3571 aa4.18□□□□□ -1.74
CAST-222ENST00000508579 KRTAP10-9P60411 292 aa4.18□□□□□ -1.74
CAST-222ENST00000508579 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
CAST-222ENST00000508579 CRYBG3Q68DQ2 2970 aa4.17□□□□□ -1.74
CAST-222ENST00000508579 AKAP9Q99996 3911 aa4.17□□□□□ -1.74
CAST-222ENST00000508579 MXRA5Q9NR99 2828 aa4.17□□□□□ -1.74
CAST-222ENST00000508579 CELSR2Q9HCU4 2923 aa4.16□□□□□ -1.74
CAST-222ENST00000508579 PDZD2O15018 2839 aa4.16□□□□□ -1.74
CAST-222ENST00000508579 MTORP42345 2549 aa4.16□□□□□ -1.74
CAST-222ENST00000508579 JMJD1CQ15652 2540 aa4.16□□□□□ -1.74
CAST-222ENST00000508579 APLNQ9ULZ1 77 aa4.15□□□□□ -1.74
CAST-222ENST00000508579 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
CAST-222ENST00000508579 VPS13CQ709C8 3753 aa4.11□□□□□ -1.75
CAST-222ENST00000508579 APCP25054 2843 aa4.09□□□□□ -1.75
CAST-222ENST00000508579 NIPBLQ6KC79 2804 aaeCLIP4.08□□□□□ -1.766e-9■■■■□ 19.5
CAST-222ENST00000508579 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
CAST-222ENST00000508579 TENM2Q9NT68 2774 aa4.08□□□□□ -1.76
CAST-222ENST00000508579 HIVEP2P31629 2446 aa4.07□□□□□ -1.76
CAST-222ENST00000508579 A0A0D9SG42 100 aa4.05□□□□□ -1.76
CAST-222ENST00000508579 ZANQ9Y493 2812 aa4.05□□□□□ -1.76
CAST-222ENST00000508579 CCDC168Q8NDH2 2452 aa4.05□□□□□ -1.76
CAST-222ENST00000508579 CSMD2Q7Z408 3487 aa4.05□□□□□ -1.76
CAST-222ENST00000508579 NBEAL1Q6ZS30 2694 aa4.03□□□□□ -1.76
CAST-222ENST00000508579 NBEAL2Q6ZNJ1 2754 aa4.02□□□□□ -1.77
CAST-222ENST00000508579 ATRQ13535 2644 aa4.02□□□□□ -1.77
CAST-222ENST00000508579 KRTAP10-11P60412 298 aa4.02□□□□□ -1.77
CAST-222ENST00000508579 FBN1P35555 2871 aaKnown RBP4□□□□□ -1.77
CAST-222ENST00000508579 ANK3Q12955 4377 aaKnown RBP4□□□□□ -1.77
CAST-222ENST00000508579 STAB1Q9NY15 2570 aa3.99□□□□□ -1.77
CAST-222ENST00000508579 SPINK6Q6UWN8 80 aa3.99□□□□□ -1.77
CAST-222ENST00000508579 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
CAST-222ENST00000508579 DNAH1Q9P2D7 4330 aa3.97□□□□□ -1.77
CAST-222ENST00000508579 ZNF469Q96JG9 3925 aaPredicted RBP3.97□□□□□ -1.77
CAST-222ENST00000508579 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
CAST-222ENST00000508579 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
CAST-222ENST00000508579 KRTAP1-5Q9BYS1 174 aa3.97□□□□□ -1.77
CAST-222ENST00000508579 COL6A5A8TX70 2615 aa3.96□□□□□ -1.78
CAST-222ENST00000508579 NSD1Q96L73 2696 aaPredicted RBP3.95□□□□□ -1.78
CAST-222ENST00000508579 ACANP16112 2415 aa3.95□□□□□ -1.78
CAST-222ENST00000508579 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms