RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 DSCR8Q96T75 97 aa4.97□□□□□ -1.61
USP46-207ENST00000508499 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
USP46-207ENST00000508499 SIGMAR1Q99720 223 aa4.97□□□□□ -1.61
USP46-207ENST00000508499 TRBV7-7A0A0K0K1E9 115 aa4.96□□□□□ -1.62
USP46-207ENST00000508499 Q6ZQT0 140 aa4.96□□□□□ -1.62
USP46-207ENST00000508499 LIMD2Q9BT23 127 aa4.96□□□□□ -1.62
USP46-207ENST00000508499 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
USP46-207ENST00000508499 A0A1W2PNM2 257 aa4.95□□□□□ -1.62
USP46-207ENST00000508499 K7ERU9 68 aa4.94□□□□□ -1.62
USP46-207ENST00000508499 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
USP46-207ENST00000508499 CCKP06307 115 aa4.93□□□□□ -1.62
USP46-207ENST00000508499 SS18L2Q9UHA2 77 aa4.93□□□□□ -1.62
USP46-207ENST00000508499 A0A0G2JQZ4 141 aa4.92□□□□□ -1.62
USP46-207ENST00000508499 C14orf132Q9NPU4 83 aa4.92□□□□□ -1.62
USP46-207ENST00000508499 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
USP46-207ENST00000508499 ETDBQ3ZM63 59 aa4.9□□□□□ -1.62
USP46-207ENST00000508499 FP248Q71RG6 208 aaPredicted RBP4.9□□□□□ -1.62
USP46-207ENST00000508499 A0A087WSZ3 146 aa4.89□□□□□ -1.63
USP46-207ENST00000508499 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
USP46-207ENST00000508499 HRCT1Q6UXD1 115 aa4.89□□□□□ -1.63
USP46-207ENST00000508499 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
USP46-207ENST00000508499 FAM240AA0A1B0GVK7 77 aa4.86□□□□□ -1.63
USP46-207ENST00000508499 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
USP46-207ENST00000508499 Q96NJ1 140 aa4.86□□□□□ -1.63
USP46-207ENST00000508499 LINC00472Q9H8W2 130 aa4.86□□□□□ -1.63
USP46-207ENST00000508499 ACYP1P07311 99 aa4.85□□□□□ -1.63
USP46-207ENST00000508499 TPRXLQ17RH7 258 aa4.84□□□□□ -1.63
USP46-207ENST00000508499 J3KT08 172 aa4.83□□□□□ -1.64
USP46-207ENST00000508499 RETNLBQ9BQ08 111 aa4.81□□□□□ -1.64
USP46-207ENST00000508499 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
USP46-207ENST00000508499 RPS28P62857 69 aaKnown RBP4.8□□□□□ -1.64
USP46-207ENST00000508499 NREPQ16612 68 aa4.8□□□□□ -1.64
USP46-207ENST00000508499 LINC00846Q9NV44 126 aa4.8□□□□□ -1.64
USP46-207ENST00000508499 J3QR89 54 aa4.8□□□□□ -1.64
USP46-207ENST00000508499 Q6ZVQ6 151 aa4.8□□□□□ -1.64
USP46-207ENST00000508499 UBL5Q9BZL1 73 aa4.8□□□□□ -1.64
USP46-207ENST00000508499 PRR4Q16378 134 aa4.79□□□□□ -1.64
USP46-207ENST00000508499 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
USP46-207ENST00000508499 Q75L30 129 aa4.79□□□□□ -1.64
USP46-207ENST00000508499 HERC1Q15751 4861 aa4.78□□□□□ -1.64
USP46-207ENST00000508499 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
USP46-207ENST00000508499 A8MWP4 228 aa4.76□□□□□ -1.65
USP46-207ENST00000508499 CXCL6P80162 114 aa4.76□□□□□ -1.65
USP46-207ENST00000508499 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
USP46-207ENST00000508499 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
USP46-207ENST00000508499 BPY2O14599 106 aa4.74□□□□□ -1.65
USP46-207ENST00000508499 NDUFB1O75438 58 aa4.74□□□□□ -1.65
USP46-207ENST00000508499 DSCR10P59022 87 aa4.74□□□□□ -1.65
USP46-207ENST00000508499 ATP5EP2Q5VTU8 51 aa4.74□□□□□ -1.65
USP46-207ENST00000508499 PRR15Q8IV56 129 aa4.73□□□□□ -1.65
USP46-207ENST00000508499 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
USP46-207ENST00000508499 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
USP46-207ENST00000508499 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
USP46-207ENST00000508499 LINC00643Q86TS7 51 aa4.72□□□□□ -1.65
USP46-207ENST00000508499 A0A0U1RQV1 116 aa4.71□□□□□ -1.66
USP46-207ENST00000508499 LINC00313P59037 77 aa4.71□□□□□ -1.66
USP46-207ENST00000508499 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
USP46-207ENST00000508499 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
USP46-207ENST00000508499 K7EQZ3 153 aa4.7□□□□□ -1.66
USP46-207ENST00000508499 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
USP46-207ENST00000508499 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
USP46-207ENST00000508499 A8MUU9 505 aa4.68□□□□□ -1.66
USP46-207ENST00000508499 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
USP46-207ENST00000508499 C8orf17Q9NRJ1 99 aa4.68□□□□□ -1.66
USP46-207ENST00000508499 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
USP46-207ENST00000508499 FAM236DA0A1B0GTK5 79 aa4.67□□□□□ -1.66
USP46-207ENST00000508499 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
USP46-207ENST00000508499 FAM236CP0DP71 79 aa4.67□□□□□ -1.66
USP46-207ENST00000508499 NOTCH2NLQ7Z3S9 236 aa4.67□□□□□ -1.66
USP46-207ENST00000508499 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
USP46-207ENST00000508499 RPL37P61927 97 aaKnown RBP4.66□□□□□ -1.66
USP46-207ENST00000508499 TMEM254Q8TBM7 123 aa4.66□□□□□ -1.66
USP46-207ENST00000508499 LPAP08519 4548 aa4.66□□□□□ -1.66
USP46-207ENST00000508499 ANAPC13Q9BS18 74 aa4.65□□□□□ -1.66
USP46-207ENST00000508499 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
USP46-207ENST00000508499 Q8N9L7 120 aa4.63□□□□□ -1.67
USP46-207ENST00000508499 MRPL34Q9BQ48 92 aaKnown RBP4.63□□□□□ -1.67
USP46-207ENST00000508499 IMUPQ9GZP8 106 aa4.63□□□□□ -1.67
USP46-207ENST00000508499 LRP2P98164 4655 aa4.63□□□□□ -1.67
USP46-207ENST00000508499 HCG22E2RYF7 251 aa4.63□□□□□ -1.67
USP46-207ENST00000508499 MT-ATP8P03928 68 aa4.63□□□□□ -1.67
USP46-207ENST00000508499 CASC2Q6XLA1 102 aa4.62□□□□□ -1.67
USP46-207ENST00000508499 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.67
USP46-207ENST00000508499 HIST1H4AP62805 103 aaKnown RBP4.58□□□□□ -1.68
USP46-207ENST00000508499 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
USP46-207ENST00000508499 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
USP46-207ENST00000508499 ZCCHC13Q8WW36 166 aaKnown RBP4.56□□□□□ -1.68
USP46-207ENST00000508499 PCOTHQ58A44 107 aa4.55□□□□□ -1.68
USP46-207ENST00000508499 A0A087WVE0 104 aa4.54□□□□□ -1.68
USP46-207ENST00000508499 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
USP46-207ENST00000508499 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
USP46-207ENST00000508499 NDUFS5O43920 106 aa4.52□□□□□ -1.69
USP46-207ENST00000508499 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
USP46-207ENST00000508499 UQCRQO14949 82 aa4.5□□□□□ -1.69
USP46-207ENST00000508499 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
USP46-207ENST00000508499 OCR1Q9BZK8 76 aa4.5□□□□□ -1.69
USP46-207ENST00000508499 RBM12B-AS1Q9P1G2 102 aa4.5□□□□□ -1.69
USP46-207ENST00000508499 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
USP46-207ENST00000508499 Q5W150 140 aa4.49□□□□□ -1.69
USP46-207ENST00000508499 TRAV22A0A0B4J277 110 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms