RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 WNK2Q9Y3S1 2297 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 FLNBO75369 2602 aaKnown RBP0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 H0YAA0 97 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 CMC2Q9NRP2 79 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 MYO9AB2RTY4 2548 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 CCDC168Q8NDH2 2452 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 VWFP04275 2813 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 GOLGB1Q14789 3259 aaKnown RBP0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 EPG5Q9HCE0 2579 aa0.49□□□□□ -2.33
CBX3P3-201ENST00000508108 NAV2Q8IVL1 2488 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 WNK1Q9H4A3 2382 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 ANKRD11Q6UB99 2663 aaPredicted RBP0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 TEP1Q99973 2627 aaKnown RBP0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 USP9XQ93008 2570 aaPredicted RBP0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 C9orf92A6NGG3 77 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 WFDC10BQ8IUB3 73 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 MTORP42345 2549 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 SONP18583 2426 aaKnown RBP0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 SPG11Q96JI7 2443 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 CHD6Q8TD26 2715 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 CSPG4Q6UVK1 2322 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 OTOGQ6ZRI0 2925 aa0.48□□□□□ -2.33
CBX3P3-201ENST00000508108 ITPR3Q14573 2671 aa0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 GCN1Q92616 2671 aaKnown RBP0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 CEP295Q9C0D2 2601 aa0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 H3BUA1 57 aa0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 SMIM2Q9BVW6 85 aa0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 KAAG1Q9UBP8 84 aa0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 TLN1Q9Y490 2541 aaKnown RBP0.47□□□□□ -2.33
CBX3P3-201ENST00000508108 AKAP13Q12802 2813 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 PCNTO95613 3336 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 SETXQ7Z333 2677 aaKnown RBP0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 NDUFA1O15239 70 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 CRIP1P50238 77 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 PRLHP81277 87 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 WT1-ASQ06250 92 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 LINC01590Q5TEZ4 76 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 ACANP16112 2415 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 ANK2Q01484 3957 aa0.46□□□□□ -2.34
CBX3P3-201ENST00000508108 CRYBG3Q68DQ2 2970 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 SZT2Q5T011 3432 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 CFAP46Q8IYW2 2715 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 C5orf42Q9H799 3197 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 WDR87Q6ZQQ6 2873 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 K7EIM0 57 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 RPL39LQ96EH5 51 aaKnown RBP0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 TMEM167BQ9NRX6 74 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 TLN2Q9Y4G6 2542 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 MAST4O15021 2626 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 ATRQ13535 2644 aa0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 SETD2Q9BYW2 2564 aaPredicted RBP0.45□□□□□ -2.34
CBX3P3-201ENST00000508108 CSMD3Q7Z407 3707 aa0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 IGSF10Q6WRI0 2623 aa0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 SPTBN5Q9NRC6 3674 aaKnown RBP0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 UNC80Q8N2C7 3258 aa0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 BRCA2P51587 3418 aa0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 CENPFP49454 3210 aa0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 COL6A3P12111 3177 aa0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 UTP20O75691 2785 aaKnown RBP0.44□□□□□ -2.34
CBX3P3-201ENST00000508108 RANBP2P49792 3224 aaKnown RBP0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 VCANP13611 3396 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 PRUNE2Q8WUY3 3088 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 USP9YO00507 2555 aaPredicted RBP0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 NBPF19A0A087WUL8 3843 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 RPL39P62891 51 aaKnown RBP0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 BPTFQ12830 3046 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 LAMA3Q16787 3333 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 DNAH12Q6ZR08 3092 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 CFAP54Q96N23 3096 aa0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 DSPP15924 2871 aaKnown RBP0.43□□□□□ -2.34
CBX3P3-201ENST00000508108 MKI67P46013 3256 aaKnown RBP0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 FRYQ5TBA9 3013 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 STAB1Q9NY15 2570 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 A8MTW9 85 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 PRM1P04553 51 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 C6orf48Q9UBA6 75 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 DNAH14Q0VDD8 3507 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 NBEAL1Q6ZS30 2694 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 TEX15Q9BXT5 2789 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 ITPR2Q14571 2701 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 REV3LO60673 3130 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 CDH23Q9H251 3354 aa0.42□□□□□ -2.34
CBX3P3-201ENST00000508108 TRANK1O15050 2925 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 EYSQ5T1H1 3165 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 WDFY4Q6ZS81 3184 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 HTTP42858 3142 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 XIRP2A4UGR9 3374 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 CHD7Q9P2D1 2997 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 A0A0C4DFX4 3053 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 SPRR2DP22532 72 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 USP34Q70CQ2 3546 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 COL6A5A8TX70 2615 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 HIVEP1P15822 2718 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 CENPEQ02224 2701 aa0.41□□□□□ -2.34
CBX3P3-201ENST00000508108 LAMA2P24043 3122 aaKnown RBP0.4□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms