RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 USP9XQ93008 2570 aaPredicted RBP1.77□□□□□ -2.13
CCDC30-212ENST00000507855 J3QKU1 62 aa1.76□□□□□ -2.13
CCDC30-212ENST00000507855 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
CCDC30-212ENST00000507855 TENM2Q9NT68 2774 aa1.76□□□□□ -2.13
CCDC30-212ENST00000507855 NF1P21359 2839 aa1.76□□□□□ -2.13
CCDC30-212ENST00000507855 ZFYVE26Q68DK2 2539 aa1.75□□□□□ -2.13
CCDC30-212ENST00000507855 MYO18BQ8IUG5 2567 aa1.75□□□□□ -2.13
CCDC30-212ENST00000507855 K7EIL1 84 aa1.75□□□□□ -2.13
CCDC30-212ENST00000507855 FLNCQ14315 2725 aa1.75□□□□□ -2.13
CCDC30-212ENST00000507855 LRBAP50851 2863 aa1.75□□□□□ -2.13
CCDC30-212ENST00000507855 DEFB108BQ8NET1 73 aa1.75□□□□□ -2.13
CCDC30-212ENST00000507855 HELZ2Q9BYK8 2649 aaKnown RBP1.74□□□□□ -2.13
CCDC30-212ENST00000507855 CSMD1Q96PZ7 3565 aa1.74□□□□□ -2.13
CCDC30-212ENST00000507855 USP9YO00507 2555 aaPredicted RBP1.74□□□□□ -2.13
CCDC30-212ENST00000507855 DEFB130BP0DP73 79 aa1.74□□□□□ -2.13
CCDC30-212ENST00000507855 DEFB130AP0DP74 79 aa1.74□□□□□ -2.13
CCDC30-212ENST00000507855 SMG1Q96Q15 3661 aaKnown RBP1.74□□□□□ -2.13
CCDC30-212ENST00000507855 LRRK2Q5S007 2527 aa1.74□□□□□ -2.13
CCDC30-212ENST00000507855 ROS1P08922 2347 aa1.74□□□□□ -2.13
CCDC30-212ENST00000507855 KRTAP13-3Q3SY46 172 aa1.74□□□□□ -2.13
CCDC30-212ENST00000507855 VWFP04275 2813 aa1.73□□□□□ -2.13
CCDC30-212ENST00000507855 TENM4Q6N022 2769 aa1.73□□□□□ -2.13
CCDC30-212ENST00000507855 ABCA12Q86UK0 2595 aa1.73□□□□□ -2.13
CCDC30-212ENST00000507855 PTPN13Q12923 2485 aa1.73□□□□□ -2.13
CCDC30-212ENST00000507855 HRNRQ86YZ3 2850 aaPredicted RBP1.73□□□□□ -2.13
CCDC30-212ENST00000507855 GVQW2A0A096LPI5 108 aaPredicted RBP1.73□□□□□ -2.13
CCDC30-212ENST00000507855 PRRC2CQ9Y520 2896 aaKnown RBP1.73□□□□□ -2.13
CCDC30-212ENST00000507855 CELSR1Q9NYQ6 3014 aa1.73□□□□□ -2.13
CCDC30-212ENST00000507855 DCHS2Q6V1P9 2916 aa1.73□□□□□ -2.13
CCDC30-212ENST00000507855 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
CCDC30-212ENST00000507855 KLK9Q2XQG4 91 aa1.72□□□□□ -2.13
CCDC30-212ENST00000507855 PLAC4Q8WY50 150 aa1.72□□□□□ -2.13
CCDC30-212ENST00000507855 UNC79Q9P2D8 2635 aa1.72□□□□□ -2.13
CCDC30-212ENST00000507855 PDZD2O15018 2839 aa1.72□□□□□ -2.13
CCDC30-212ENST00000507855 SPTAN1Q13813 2472 aaKnown RBP1.72□□□□□ -2.13
CCDC30-212ENST00000507855 HTN1P15515 57 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 GCN1Q92616 2671 aaKnown RBP1.71□□□□□ -2.14
CCDC30-212ENST00000507855 DMBT1Q9UGM3 2413 aaPredicted RBP1.71□□□□□ -2.14
CCDC30-212ENST00000507855 APCP25054 2843 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 Q6ZRN7 208 aaPredicted RBP1.71□□□□□ -2.14
CCDC30-212ENST00000507855 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
CCDC30-212ENST00000507855 HIVEP2P31629 2446 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 TACC2O95359 2948 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 FBN2P35556 2912 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 BAHCC1Q9P281 2608 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 ABCA2Q9BZC7 2435 aa1.71□□□□□ -2.14
CCDC30-212ENST00000507855 LYNX1P0DP58 116 aa1.7□□□□□ -2.14
CCDC30-212ENST00000507855 LCE3AQ5TA76 89 aa1.7□□□□□ -2.14
CCDC30-212ENST00000507855 ADGRG4Q8IZF6 3080 aa1.7□□□□□ -2.14
CCDC30-212ENST00000507855 F8P00451 2351 aa1.7□□□□□ -2.14
CCDC30-212ENST00000507855 MAP1AP78559 2803 aaPredicted RBP1.7□□□□□ -2.14
CCDC30-212ENST00000507855 NBPF19A0A087WUL8 3843 aa1.7□□□□□ -2.14
CCDC30-212ENST00000507855 AKAP9Q99996 3911 aa1.7□□□□□ -2.14
CCDC30-212ENST00000507855 SPG11Q96JI7 2443 aa1.69□□□□□ -2.14
CCDC30-212ENST00000507855 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
CCDC30-212ENST00000507855 FASNP49327 2511 aaKnown RBP1.68□□□□□ -2.14
CCDC30-212ENST00000507855 RHPN1-AS1Q9BWJ2 59 aa1.68□□□□□ -2.14
CCDC30-212ENST00000507855 ITPR2Q14571 2701 aa1.68□□□□□ -2.14
CCDC30-212ENST00000507855 UTP20O75691 2785 aaKnown RBP1.68□□□□□ -2.14
CCDC30-212ENST00000507855 ANK3Q12955 4377 aaKnown RBP1.68□□□□□ -2.14
CCDC30-212ENST00000507855 ITPR3Q14573 2671 aa1.67□□□□□ -2.14
CCDC30-212ENST00000507855 SETD2Q9BYW2 2564 aaPredicted RBP1.67□□□□□ -2.14
CCDC30-212ENST00000507855 CCDC168Q8NDH2 2452 aa1.67□□□□□ -2.14
CCDC30-212ENST00000507855 HECTD1Q9ULT8 2610 aa1.67□□□□□ -2.14
CCDC30-212ENST00000507855 KRTAP21-3Q3LHN1 58 aa1.67□□□□□ -2.14
CCDC30-212ENST00000507855 CENPEQ02224 2701 aa1.67□□□□□ -2.14
CCDC30-212ENST00000507855 INE1O15225 51 aa1.66□□□□□ -2.14
CCDC30-212ENST00000507855 DEFB131AP59861 70 aa1.66□□□□□ -2.14
CCDC30-212ENST00000507855 NSD1Q96L73 2696 aaPredicted RBP1.66□□□□□ -2.14
CCDC30-212ENST00000507855 ZNF469Q96JG9 3925 aaPredicted RBP1.65□□□□□ -2.14
CCDC30-212ENST00000507855 MYO9AB2RTY4 2548 aa1.65□□□□□ -2.15
CCDC30-212ENST00000507855 H3BUA1 57 aa1.65□□□□□ -2.15
CCDC30-212ENST00000507855 FLNAP21333 2647 aaKnown RBP1.65□□□□□ -2.15
CCDC30-212ENST00000507855 SONP18583 2426 aaKnown RBP1.64□□□□□ -2.15
CCDC30-212ENST00000507855 SPINK1P00995 79 aa1.64□□□□□ -2.15
CCDC30-212ENST00000507855 SPRR1AP35321 89 aa1.64□□□□□ -2.15
CCDC30-212ENST00000507855 RPL37P61927 97 aaKnown RBP1.64□□□□□ -2.15
CCDC30-212ENST00000507855 PRLHP81277 87 aa1.64□□□□□ -2.15
CCDC30-212ENST00000507855 HIVEP1P15822 2718 aa1.64□□□□□ -2.15
CCDC30-212ENST00000507855 POLQO75417 2590 aa1.64□□□□□ -2.15
CCDC30-212ENST00000507855 DEFB136Q30KP8 78 aa1.64□□□□□ -2.15
CCDC30-212ENST00000507855 COX6B2Q6YFQ2 88 aa1.63□□□□□ -2.15
CCDC30-212ENST00000507855 VPS13CQ709C8 3753 aa1.63□□□□□ -2.15
CCDC30-212ENST00000507855 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
CCDC30-212ENST00000507855 ZANQ9Y493 2812 aa1.63□□□□□ -2.15
CCDC30-212ENST00000507855 ANK2Q01484 3957 aa1.62□□□□□ -2.15
CCDC30-212ENST00000507855 TEX15Q9BXT5 2789 aa1.62□□□□□ -2.15
CCDC30-212ENST00000507855 MXRA5Q9NR99 2828 aa1.62□□□□□ -2.15
CCDC30-212ENST00000507855 CSMD2Q7Z408 3487 aa1.62□□□□□ -2.15
CCDC30-212ENST00000507855 FLNBO75369 2602 aaKnown RBP1.62□□□□□ -2.15
CCDC30-212ENST00000507855 MEGF8Q7Z7M0 2845 aa1.61□□□□□ -2.15
CCDC30-212ENST00000507855 MAST4O15021 2626 aa1.61□□□□□ -2.15
CCDC30-212ENST00000507855 BRD3OSQ6XYD6 125 aa1.61□□□□□ -2.15
CCDC30-212ENST00000507855 UBE2DNLQ8IWF7 75 aa1.61□□□□□ -2.15
CCDC30-212ENST00000507855 USMG5Q96IX5 58 aa1.61□□□□□ -2.15
CCDC30-212ENST00000507855 DNAH3Q8TD57 4116 aa1.61□□□□□ -2.15
CCDC30-212ENST00000507855 SETXQ7Z333 2677 aaKnown RBP1.61□□□□□ -2.15
CCDC30-212ENST00000507855 ACANP16112 2415 aa1.6□□□□□ -2.15
CCDC30-212ENST00000507855 H3BUX3 64 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms