RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 IGHV6-1A0A0B4J1U7 121 aa13.14□□□□□ -0.31
SPCS3-203ENST00000507678 CIRBP-AS1Q8TBR5 109 aa13.14□□□□□ -0.31
SPCS3-203ENST00000507678 Q8N9P0 234 aaPredicted RBP13.12□□□□□ -0.31
SPCS3-203ENST00000507678 PRR15LQ9BU68 103 aa13.11□□□□□ -0.31
SPCS3-203ENST00000507678 DNAH11Q96DT5 4516 aa13.11□□□□□ -0.31
SPCS3-203ENST00000507678 SPINK6Q6UWN8 80 aa13.1□□□□□ -0.31
SPCS3-203ENST00000507678 KTN1-AS1Q86SY8 53 aa13.1□□□□□ -0.31
SPCS3-203ENST00000507678 RBM12B-AS1Q9P1G2 102 aa13.1□□□□□ -0.31
SPCS3-203ENST00000507678 DNAH5Q8TE73 4624 aa13.09□□□□□ -0.31
SPCS3-203ENST00000507678 CDK2AP2O75956 126 aa13.07□□□□□ -0.32
SPCS3-203ENST00000507678 HYDINQ4G0P3 5121 aa13.07□□□□□ -0.32
SPCS3-203ENST00000507678 NDUFS5O43920 106 aa13.06□□□□□ -0.32
SPCS3-203ENST00000507678 ALMS1Q8TCU4 4167 aa13.05□□□□□ -0.32
SPCS3-203ENST00000507678 LCA10Q71F78 164 aa13.05□□□□□ -0.32
SPCS3-203ENST00000507678 C8orf17Q9NRJ1 99 aa13.05□□□□□ -0.32
SPCS3-203ENST00000507678 LIMD2Q9BT23 127 aa13.04□□□□□ -0.32
SPCS3-203ENST00000507678 A0A087X002 238 aa13.02□□□□□ -0.32
SPCS3-203ENST00000507678 NOTCH2NLQ7Z3S9 236 aa13.02□□□□□ -0.32
SPCS3-203ENST00000507678 A0A1B0GVX0 72 aa13.01□□□□□ -0.33
SPCS3-203ENST00000507678 KRTAP10-1P60331 282 aa13□□□□□ -0.33
SPCS3-203ENST00000507678 A6NED7 52 aa12.99□□□□□ -0.33
SPCS3-203ENST00000507678 ATP11AUNQ6ZP68 121 aa12.96□□□□□ -0.34
SPCS3-203ENST00000507678 SPANXA2-OT1Q8N9U9 137 aa12.95□□□□□ -0.34
SPCS3-203ENST00000507678 PCOTHQ58A44 107 aa12.94□□□□□ -0.34
SPCS3-203ENST00000507678 LRP1BQ9NZR2 4599 aa12.94□□□□□ -0.34
SPCS3-203ENST00000507678 A6NN06 94 aa12.92□□□□□ -0.34
SPCS3-203ENST00000507678 PKD1P98161 4303 aa12.91□□□□□ -0.34
SPCS3-203ENST00000507678 Q75L30 129 aa12.91□□□□□ -0.34
SPCS3-203ENST00000507678 H3BPC8 53 aa12.91□□□□□ -0.34
SPCS3-203ENST00000507678 ASB16-AS1Q495Z4 193 aa12.9□□□□□ -0.34
SPCS3-203ENST00000507678 FAT2Q9NYQ8 4349 aa12.9□□□□□ -0.34
SPCS3-203ENST00000507678 MRPL34Q9BQ48 92 aaKnown RBP12.89□□□□□ -0.35
SPCS3-203ENST00000507678 COA5Q86WW8 74 aa12.88□□□□□ -0.35
SPCS3-203ENST00000507678 TP53AIP1Q9HCN2 124 aa12.86□□□□□ -0.35
SPCS3-203ENST00000507678 LOC101927531A0A1B0GV80 90 aa12.85□□□□□ -0.35
SPCS3-203ENST00000507678 Q6ZSA8 131 aa12.85□□□□□ -0.35
SPCS3-203ENST00000507678 SSBP3-AS1Q7Z2R9 100 aa12.84□□□□□ -0.35
SPCS3-203ENST00000507678 KRTAP13-2Q52LG2 175 aa12.83□□□□□ -0.36
SPCS3-203ENST00000507678 CDC42SE1Q9NRR8 79 aa12.82□□□□□ -0.36
SPCS3-203ENST00000507678 VPS13BQ7Z7G8 4022 aa12.79□□□□□ -0.36
SPCS3-203ENST00000507678 SPAG11AQ6PDA7 123 aa12.79□□□□□ -0.36
SPCS3-203ENST00000507678 C7orf65Q6ZTY9 151 aa12.76□□□□□ -0.37
SPCS3-203ENST00000507678 PKHD1P08F94 4074 aa12.74□□□□□ -0.37
SPCS3-203ENST00000507678 IGLV7-46A0A075B6I9 117 aa12.73□□□□□ -0.37
SPCS3-203ENST00000507678 Q5W150 140 aa12.73□□□□□ -0.37
SPCS3-203ENST00000507678 RETNLBQ9BQ08 111 aa12.72□□□□□ -0.37
SPCS3-203ENST00000507678 SPINK7P58062 85 aa12.7□□□□□ -0.38
SPCS3-203ENST00000507678 KRTAP1-4P0C5Y4 121 aa12.69□□□□□ -0.38
SPCS3-203ENST00000507678 PLA2G1BP04054 148 aaKnown RBP12.67□□□□□ -0.38
SPCS3-203ENST00000507678 LINC01558Q9Y6Z2 57 aa12.67□□□□□ -0.38
SPCS3-203ENST00000507678 LINC00313P59037 77 aa12.66□□□□□ -0.38
SPCS3-203ENST00000507678 SMR3BP02814 79 aaPredicted RBP12.62□□□□□ -0.39
SPCS3-203ENST00000507678 SACSQ9NZJ4 4579 aa12.61□□□□□ -0.39
SPCS3-203ENST00000507678 C8orf87E5RJ46 101 aa12.6□□□□□ -0.39
SPCS3-203ENST00000507678 TYMSOSQ8TAI1 123 aa12.6□□□□□ -0.39
SPCS3-203ENST00000507678 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
SPCS3-203ENST00000507678 KRTAP21-3Q3LHN1 58 aa12.56□□□□□ -0.4
SPCS3-203ENST00000507678 KRTAP13-3Q3SY46 172 aa12.55□□□□□ -0.4
SPCS3-203ENST00000507678 PRAC1Q96KF2 57 aa12.55□□□□□ -0.4
SPCS3-203ENST00000507678 HRES1P13985 223 aa12.54□□□□□ -0.4
SPCS3-203ENST00000507678 PRR26Q8N8Z3 221 aa12.52□□□□□ -0.41
SPCS3-203ENST00000507678 ADM2Q7Z4H4 148 aa12.46□□□□□ -0.41
SPCS3-203ENST00000507678 FAM229AH3BQW9 127 aa12.45□□□□□ -0.42
SPCS3-203ENST00000507678 DYNC1H1Q14204 4646 aaKnown RBP12.44□□□□□ -0.42
SPCS3-203ENST00000507678 KRTAP16-1A8MUX0 517 aa12.43□□□□□ -0.42
SPCS3-203ENST00000507678 FAT1Q14517 4588 aa12.42□□□□□ -0.42
SPCS3-203ENST00000507678 SPINK1P00995 79 aa12.41□□□□□ -0.42
SPCS3-203ENST00000507678 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
SPCS3-203ENST00000507678 IGKV2D-30A0A075B6S6 120 aa12.38□□□□□ -0.43
SPCS3-203ENST00000507678 IGKV2-30P06310 120 aa12.38□□□□□ -0.43
SPCS3-203ENST00000507678 A0A1B0GVY2 172 aa12.3□□□□□ -0.44
SPCS3-203ENST00000507678 ACYP2P14621 99 aa12.29□□□□□ -0.44
SPCS3-203ENST00000507678 LINC01554Q52M75 96 aa12.28□□□□□ -0.44
SPCS3-203ENST00000507678 APOBP04114 4563 aaKnown RBP12.26□□□□□ -0.45
SPCS3-203ENST00000507678 KMT2CQ8NEZ4 4911 aaKnown RBP12.25□□□□□ -0.45
SPCS3-203ENST00000507678 C9orf92A6NGG3 77 aa12.24□□□□□ -0.45
SPCS3-203ENST00000507678 H3BS24 57 aa12.24□□□□□ -0.45
SPCS3-203ENST00000507678 DMAC1Q96GE9 116 aa12.23□□□□□ -0.45
SPCS3-203ENST00000507678 RYR2Q92736 4967 aa12.18□□□□□ -0.46
SPCS3-203ENST00000507678 KRTAP10-4P60372 401 aaPredicted RBP12.18□□□□□ -0.46
SPCS3-203ENST00000507678 RPS29P62273 56 aaKnown RBP12.12□□□□□ -0.47
SPCS3-203ENST00000507678 A0A1B0GU69 56 aa12.11□□□□□ -0.47
SPCS3-203ENST00000507678 Q8N1X5 172 aa12.08□□□□□ -0.48
SPCS3-203ENST00000507678 SPATA8Q6RVD6 105 aa12.07□□□□□ -0.48
SPCS3-203ENST00000507678 CSAG1Q6PB30 78 aa12.03□□□□□ -0.48
SPCS3-203ENST00000507678 PKHD1L1Q86WI1 4243 aa12.03□□□□□ -0.48
SPCS3-203ENST00000507678 MIR22HGQ0VDD5 57 aa12.03□□□□□ -0.48
SPCS3-203ENST00000507678 LRP1Q07954 4544 aaKnown RBP11.97□□□□□ -0.49
SPCS3-203ENST00000507678 UQCR11O14957 56 aa11.96□□□□□ -0.5
SPCS3-203ENST00000507678 FLG2Q5D862 2391 aaPredicted RBP11.94□□□□□ -0.5
SPCS3-203ENST00000507678 A8MUU9 505 aa11.91□□□□□ -0.5
SPCS3-203ENST00000507678 C20orf166-AS1Q96NR2 134 aa11.91□□□□□ -0.5
SPCS3-203ENST00000507678 Q5VSD8 79 aa11.87□□□□□ -0.51
SPCS3-203ENST00000507678 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
SPCS3-203ENST00000507678 RYR3Q15413 4870 aa11.83□□□□□ -0.52
SPCS3-203ENST00000507678 HSPG2P98160 4391 aa11.83□□□□□ -0.52
SPCS3-203ENST00000507678 TNXBP22105 4242 aa11.77□□□□□ -0.52
SPCS3-203ENST00000507678 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
SPCS3-203ENST00000507678 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
SPCS3-203ENST00000507678 KRTAP17-1Q9BYP8 105 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms