RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 K7EP34 96 aa5.22□□□□□ -1.57
PDGFRA-205ENST00000507536 MT2AP02795 61 aa5.22□□□□□ -1.57
PDGFRA-205ENST00000507536 A8MUU9 505 aa5.21□□□□□ -1.58
PDGFRA-205ENST00000507536 Q96NJ1 140 aa5.21□□□□□ -1.58
PDGFRA-205ENST00000507536 H3BUT2 72 aa5.2□□□□□ -1.58
PDGFRA-205ENST00000507536 MT1FP04733 61 aa5.19□□□□□ -1.58
PDGFRA-205ENST00000507536 COX8AP10176 69 aa5.19□□□□□ -1.58
PDGFRA-205ENST00000507536 HSD52Q0P140 79 aa5.19□□□□□ -1.58
PDGFRA-205ENST00000507536 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
PDGFRA-205ENST00000507536 LST1O00453 97 aa5.18□□□□□ -1.58
PDGFRA-205ENST00000507536 FABP2P12104 132 aa5.18□□□□□ -1.58
PDGFRA-205ENST00000507536 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.18□□□□□ -1.58
PDGFRA-205ENST00000507536 PPDPFLQ8WWR9 84 aa5.17□□□□□ -1.58
PDGFRA-205ENST00000507536 SPCS1Q9Y6A9 102 aa5.17□□□□□ -1.58
PDGFRA-205ENST00000507536 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
PDGFRA-205ENST00000507536 F8W1H4 67 aa5.15□□□□□ -1.59
PDGFRA-205ENST00000507536 C2orf91Q6ZV80 131 aa5.14□□□□□ -1.59
PDGFRA-205ENST00000507536 DSCR10P59022 87 aa5.13□□□□□ -1.59
PDGFRA-205ENST00000507536 SS18L2Q9UHA2 77 aa5.13□□□□□ -1.59
PDGFRA-205ENST00000507536 TRBV20-1A0A075B6N2 111 aa5.12□□□□□ -1.59
PDGFRA-205ENST00000507536 TEN1Q86WV5 123 aa5.12□□□□□ -1.59
PDGFRA-205ENST00000507536 HIGD1BQ9P298 99 aa5.12□□□□□ -1.59
PDGFRA-205ENST00000507536 A0A087WSZ3 146 aa5.11□□□□□ -1.59
PDGFRA-205ENST00000507536 HRES1P13985 223 aa5.11□□□□□ -1.59
PDGFRA-205ENST00000507536 FAM218AQ96MZ4 157 aa5.11□□□□□ -1.59
PDGFRA-205ENST00000507536 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
PDGFRA-205ENST00000507536 C5orf47Q569G3 176 aa5.09□□□□□ -1.59
PDGFRA-205ENST00000507536 NDUFV3P56181 108 aaKnown RBP5.08□□□□□ -1.6
PDGFRA-205ENST00000507536 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
PDGFRA-205ENST00000507536 NOTCH2NLQ7Z3S9 236 aa5.08□□□□□ -1.6
PDGFRA-205ENST00000507536 RAB37Q96AX2 223 aa5.08□□□□□ -1.6
PDGFRA-205ENST00000507536 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
PDGFRA-205ENST00000507536 A0A1W2PNM2 257 aa5.07□□□□□ -1.6
PDGFRA-205ENST00000507536 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
PDGFRA-205ENST00000507536 LYRM7Q5U5X0 104 aa5.07□□□□□ -1.6
PDGFRA-205ENST00000507536 FAM236DA0A1B0GTK5 79 aa5.06□□□□□ -1.6
PDGFRA-205ENST00000507536 FAM236CP0DP71 79 aa5.06□□□□□ -1.6
PDGFRA-205ENST00000507536 HIST1H4GQ99525 98 aa5.06□□□□□ -1.6
PDGFRA-205ENST00000507536 H3BMG7 143 aa5.05□□□□□ -1.6
PDGFRA-205ENST00000507536 ANAPC13Q9BS18 74 aa5.05□□□□□ -1.6
PDGFRA-205ENST00000507536 LINC00313P59037 77 aa5.04□□□□□ -1.6
PDGFRA-205ENST00000507536 CEND1Q8N111 149 aa5.04□□□□□ -1.6
PDGFRA-205ENST00000507536 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
PDGFRA-205ENST00000507536 NAA38Q9BRA0 125 aaKnown RBP5.03□□□□□ -1.6
PDGFRA-205ENST00000507536 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
PDGFRA-205ENST00000507536 H0YGX0 51 aa5.02□□□□□ -1.61
PDGFRA-205ENST00000507536 ETDBQ3ZM63 59 aa5.02□□□□□ -1.61
PDGFRA-205ENST00000507536 RBM12B-AS1Q9P1G2 102 aa5.02□□□□□ -1.61
PDGFRA-205ENST00000507536 IGKV4-1P06312 121 aa5.01□□□□□ -1.61
PDGFRA-205ENST00000507536 FXYD2P54710 66 aa5.01□□□□□ -1.61
PDGFRA-205ENST00000507536 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
PDGFRA-205ENST00000507536 PRO0461Q9UI25 63 aa5□□□□□ -1.61
PDGFRA-205ENST00000507536 DEFB116Q30KQ4 102 aa4.99□□□□□ -1.61
PDGFRA-205ENST00000507536 TRBV7-4A0A0J9YYF1 115 aa4.98□□□□□ -1.61
PDGFRA-205ENST00000507536 A0A1B0GX51 115 aa4.98□□□□□ -1.61
PDGFRA-205ENST00000507536 SNCGO76070 127 aa4.97□□□□□ -1.61
PDGFRA-205ENST00000507536 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
PDGFRA-205ENST00000507536 IGHV6-1A0A0B4J1U7 121 aa4.96□□□□□ -1.62
PDGFRA-205ENST00000507536 K7ERJ3 54 aa4.96□□□□□ -1.62
PDGFRA-205ENST00000507536 MT-ATP8P03928 68 aa4.96□□□□□ -1.62
PDGFRA-205ENST00000507536 SCGB1C2P0DMR2 95 aa4.95□□□□□ -1.62
PDGFRA-205ENST00000507536 SEC61GP60059 68 aa4.95□□□□□ -1.62
PDGFRA-205ENST00000507536 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
PDGFRA-205ENST00000507536 PSMB2P49721 201 aa4.94□□□□□ -1.62
PDGFRA-205ENST00000507536 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
PDGFRA-205ENST00000507536 SMIM20Q8N5G0 67 aa4.93□□□□□ -1.62
PDGFRA-205ENST00000507536 ZCCHC13Q8WW36 166 aaKnown RBP4.93□□□□□ -1.62
PDGFRA-205ENST00000507536 PRO1854Q9UHT4 67 aa4.93□□□□□ -1.62
PDGFRA-205ENST00000507536 A0A1B0GVX0 72 aa4.92□□□□□ -1.62
PDGFRA-205ENST00000507536 CCKP06307 115 aa4.92□□□□□ -1.62
PDGFRA-205ENST00000507536 SPINK7P58062 85 aa4.92□□□□□ -1.62
PDGFRA-205ENST00000507536 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
PDGFRA-205ENST00000507536 ORMDL1Q9P0S3 153 aa4.91□□□□□ -1.62
PDGFRA-205ENST00000507536 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
PDGFRA-205ENST00000507536 TRACP01848 142 aa4.9□□□□□ -1.63
PDGFRA-205ENST00000507536 LINC00846Q9NV44 126 aa4.9□□□□□ -1.63
PDGFRA-205ENST00000507536 A8MWP4 228 aa4.89□□□□□ -1.63
PDGFRA-205ENST00000507536 MT3P25713 68 aa4.89□□□□□ -1.63
PDGFRA-205ENST00000507536 CCDC179H3BU77 68 aa4.88□□□□□ -1.63
PDGFRA-205ENST00000507536 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
PDGFRA-205ENST00000507536 FAM240AA0A1B0GVK7 77 aa4.87□□□□□ -1.63
PDGFRA-205ENST00000507536 TMEM256-PLSCR3K7ERE1 68 aa4.87□□□□□ -1.63
PDGFRA-205ENST00000507536 DNAL4O96015 105 aa4.87□□□□□ -1.63
PDGFRA-205ENST00000507536 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
PDGFRA-205ENST00000507536 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.87□□□□□ -1.63
PDGFRA-205ENST00000507536 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
PDGFRA-205ENST00000507536 H3BQ85 93 aa4.86□□□□□ -1.63
PDGFRA-205ENST00000507536 ACYP1P07311 99 aa4.86□□□□□ -1.63
PDGFRA-205ENST00000507536 C9JAW5 83 aa4.85□□□□□ -1.63
PDGFRA-205ENST00000507536 J3KT08 172 aa4.85□□□□□ -1.63
PDGFRA-205ENST00000507536 H3BT86 120 aa4.84□□□□□ -1.63
PDGFRA-205ENST00000507536 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
PDGFRA-205ENST00000507536 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
PDGFRA-205ENST00000507536 COX6CP09669 75 aa4.83□□□□□ -1.64
PDGFRA-205ENST00000507536 UQCRQO14949 82 aa4.82□□□□□ -1.64
PDGFRA-205ENST00000507536 Q6ZQT0 140 aa4.81□□□□□ -1.64
PDGFRA-205ENST00000507536 RBM3P98179 157 aaKnown RBP4.8□□□□□ -1.64
PDGFRA-205ENST00000507536 C8orf17Q9NRJ1 99 aa4.8□□□□□ -1.64
PDGFRA-205ENST00000507536 V9GYY9 64 aa4.8□□□□□ -1.64
PDGFRA-205ENST00000507536 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms