RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
NEK1-203ENST00000507142 CSMD1Q96PZ7 3565 aa5.5□□□□□ -1.53
NEK1-203ENST00000507142 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
NEK1-203ENST00000507142 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
NEK1-203ENST00000507142 CELSR1Q9NYQ6 3014 aa5.5□□□□□ -1.53
NEK1-203ENST00000507142 ANK3Q12955 4377 aaKnown RBP5.5□□□□□ -1.53
NEK1-203ENST00000507142 A0A1B0GVY2 172 aa5.5□□□□□ -1.53
NEK1-203ENST00000507142 TENM3Q9P273 2699 aa5.48□□□□□ -1.53
NEK1-203ENST00000507142 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
NEK1-203ENST00000507142 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
NEK1-203ENST00000507142 KRTAP13-2Q52LG2 175 aa5.47□□□□□ -1.53
NEK1-203ENST00000507142 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
NEK1-203ENST00000507142 SPINK7P58062 85 aa5.46□□□□□ -1.54
NEK1-203ENST00000507142 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
NEK1-203ENST00000507142 H3BS24 57 aa5.45□□□□□ -1.54
NEK1-203ENST00000507142 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
NEK1-203ENST00000507142 LINC00472Q9H8W2 130 aa5.43□□□□□ -1.54
NEK1-203ENST00000507142 CSMD2Q7Z408 3487 aa5.43□□□□□ -1.54
NEK1-203ENST00000507142 MMP24-AS1A0A0U1RRL7 71 aa5.42□□□□□ -1.54
NEK1-203ENST00000507142 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
NEK1-203ENST00000507142 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
NEK1-203ENST00000507142 VWFP04275 2813 aa5.4□□□□□ -1.54
NEK1-203ENST00000507142 CSAG1Q6PB30 78 aa5.4□□□□□ -1.54
NEK1-203ENST00000507142 A0A0D9SG42 100 aa5.4□□□□□ -1.55
NEK1-203ENST00000507142 SPENQ96T58 3664 aaKnown RBP5.39□□□□□ -1.55
NEK1-203ENST00000507142 Q1T7F1 81 aa5.39□□□□□ -1.55
NEK1-203ENST00000507142 BSNQ9UPA5 3926 aa5.39□□□□□ -1.55
NEK1-203ENST00000507142 S4R3F8 94 aa5.39□□□□□ -1.55
NEK1-203ENST00000507142 TGP01266 2768 aa5.38□□□□□ -1.55
NEK1-203ENST00000507142 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
NEK1-203ENST00000507142 FBN3Q75N90 2809 aa5.37□□□□□ -1.55
NEK1-203ENST00000507142 Q5W150 140 aa5.34□□□□□ -1.55
NEK1-203ENST00000507142 HRES1P13985 223 aa5.33□□□□□ -1.56
NEK1-203ENST00000507142 Q8N9P0 234 aaPredicted RBP5.33□□□□□ -1.56
NEK1-203ENST00000507142 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
NEK1-203ENST00000507142 Q75L30 129 aa5.32□□□□□ -1.56
NEK1-203ENST00000507142 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
NEK1-203ENST00000507142 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
NEK1-203ENST00000507142 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
NEK1-203ENST00000507142 Q5XG85 94 aa5.3□□□□□ -1.56
NEK1-203ENST00000507142 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
NEK1-203ENST00000507142 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
NEK1-203ENST00000507142 A0A1B0GU33 70 aa5.26□□□□□ -1.57
NEK1-203ENST00000507142 NOTCH2NLQ7Z3S9 236 aa5.26□□□□□ -1.57
NEK1-203ENST00000507142 CAMK2N1Q7Z7J9 78 aa5.25□□□□□ -1.57
NEK1-203ENST00000507142 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
NEK1-203ENST00000507142 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
NEK1-203ENST00000507142 R4GN34 69 aa5.22□□□□□ -1.57
NEK1-203ENST00000507142 TPRXLQ17RH7 258 aa5.22□□□□□ -1.57
NEK1-203ENST00000507142 TRRAPQ9Y4A5 3859 aa5.22□□□□□ -1.57
NEK1-203ENST00000507142 C20orf166-AS1Q96NR2 134 aa5.22□□□□□ -1.57
NEK1-203ENST00000507142 XP32Q5T750 250 aa5.21□□□□□ -1.58
NEK1-203ENST00000507142 Q5VV11 94 aa5.2□□□□□ -1.58
NEK1-203ENST00000507142 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
NEK1-203ENST00000507142 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
NEK1-203ENST00000507142 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
NEK1-203ENST00000507142 SVEP1Q4LDE5 3571 aa5.18□□□□□ -1.58
NEK1-203ENST00000507142 AKAP9Q99996 3911 aa5.14□□□□□ -1.59
NEK1-203ENST00000507142 M0QZ58 72 aa5.13□□□□□ -1.59
NEK1-203ENST00000507142 PLAC4Q8WY50 150 aa5.13□□□□□ -1.59
NEK1-203ENST00000507142 A8MUU9 505 aa5.12□□□□□ -1.59
NEK1-203ENST00000507142 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
NEK1-203ENST00000507142 KRTAP13-3Q3SY46 172 aa5.11□□□□□ -1.59
NEK1-203ENST00000507142 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
NEK1-203ENST00000507142 ROMO1P60602 79 aa5.07□□□□□ -1.6
NEK1-203ENST00000507142 KRTAP16-1A8MUX0 517 aa5.07□□□□□ -1.6
NEK1-203ENST00000507142 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
NEK1-203ENST00000507142 ZNF469Q96JG9 3925 aaPredicted RBP5.02□□□□□ -1.61
NEK1-203ENST00000507142 MEGF8Q7Z7M0 2845 aa5.01□□□□□ -1.61
NEK1-203ENST00000507142 DNHD1Q96M86 4753 aa4.99□□□□□ -1.61
NEK1-203ENST00000507142 COL7A1Q02388 2944 aa4.99□□□□□ -1.61
NEK1-203ENST00000507142 SRRM2Q9UQ35 2752 aaKnown RBP4.98□□□□□ -1.61
NEK1-203ENST00000507142 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
NEK1-203ENST00000507142 ALMS1Q8TCU4 4167 aa4.96□□□□□ -1.61
NEK1-203ENST00000507142 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
NEK1-203ENST00000507142 VPS13CQ709C8 3753 aa4.94□□□□□ -1.62
NEK1-203ENST00000507142 CUBNO60494 3623 aa4.94□□□□□ -1.62
NEK1-203ENST00000507142 DNAH9Q9NYC9 4486 aa4.92□□□□□ -1.62
NEK1-203ENST00000507142 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
NEK1-203ENST00000507142 A6NN06 94 aa4.91□□□□□ -1.62
NEK1-203ENST00000507142 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.62
NEK1-203ENST00000507142 NDUFAF8A1L188 74 aa4.88□□□□□ -1.63
NEK1-203ENST00000507142 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
NEK1-203ENST00000507142 A8MU10 97 aa4.78□□□□□ -1.64
NEK1-203ENST00000507142 ANK2Q01484 3957 aa4.73□□□□□ -1.65
NEK1-203ENST00000507142 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
NEK1-203ENST00000507142 DNAH5Q8TE73 4624 aa4.68□□□□□ -1.66
NEK1-203ENST00000507142 PLECQ15149 4684 aaKnown RBP4.67□□□□□ -1.66
NEK1-203ENST00000507142 PRKDCP78527 4128 aaKnown RBP4.66□□□□□ -1.66
NEK1-203ENST00000507142 DNAH11Q96DT5 4516 aa4.66□□□□□ -1.66
NEK1-203ENST00000507142 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
NEK1-203ENST00000507142 DNAH1Q9P2D7 4330 aa4.64□□□□□ -1.67
NEK1-203ENST00000507142 TNP1P09430 55 aa4.63□□□□□ -1.67
NEK1-203ENST00000507142 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.68
NEK1-203ENST00000507142 P0C880 135 aa4.57□□□□□ -1.68
NEK1-203ENST00000507142 VPS13DQ5THJ4 4388 aa4.57□□□□□ -1.68
NEK1-203ENST00000507142 DYNC1H1Q14204 4646 aaKnown RBP4.55□□□□□ -1.68
NEK1-203ENST00000507142 DNAH10Q8IVF4 4471 aa4.53□□□□□ -1.68
NEK1-203ENST00000507142 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
NEK1-203ENST00000507142 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms