RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 A0A1B0GVX0 72 aa10.61□□□□□ -0.71
SMN2-206ENST00000506734 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
SMN2-206ENST00000506734 UQCRQO14949 82 aa10.6□□□□□ -0.71
SMN2-206ENST00000506734 C1orf195Q5TG92 126 aa10.6□□□□□ -0.71
SMN2-206ENST00000506734 MMP24-AS1A0A0U1RRL7 71 aa10.59□□□□□ -0.71
SMN2-206ENST00000506734 CCDC179H3BU77 68 aa10.59□□□□□ -0.71
SMN2-206ENST00000506734 KRTAP17-1Q9BYP8 105 aa10.59□□□□□ -0.71
SMN2-206ENST00000506734 Q8N1X5 172 aa10.58□□□□□ -0.72
SMN2-206ENST00000506734 OCR1Q9BZK8 76 aa10.58□□□□□ -0.72
SMN2-206ENST00000506734 CASC2Q6XLA1 102 aa10.57□□□□□ -0.72
SMN2-206ENST00000506734 WFDC13Q8IUB5 93 aa10.57□□□□□ -0.72
SMN2-206ENST00000506734 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
SMN2-206ENST00000506734 IGHV6-1A0A0B4J1U7 121 aa10.55□□□□□ -0.72
SMN2-206ENST00000506734 hDV103S1A0JD37 113 aa10.52□□□□□ -0.72
SMN2-206ENST00000506734 TNXBP22105 4242 aa10.51□□□□□ -0.73
SMN2-206ENST00000506734 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
SMN2-206ENST00000506734 KRTAP10-8P60410 259 aa10.49□□□□□ -0.73
SMN2-206ENST00000506734 LRP1Q07954 4544 aaKnown RBP10.49□□□□□ -0.73
SMN2-206ENST00000506734 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
SMN2-206ENST00000506734 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
SMN2-206ENST00000506734 TMEM254Q8TBM7 123 aa10.46□□□□□ -0.74
SMN2-206ENST00000506734 C20orf197Q8N268 126 aa10.43□□□□□ -0.74
SMN2-206ENST00000506734 MRPL34Q9BQ48 92 aaKnown RBP10.43□□□□□ -0.74
SMN2-206ENST00000506734 LINC00313P59037 77 aa10.41□□□□□ -0.74
SMN2-206ENST00000506734 KLKP1Q107X0 134 aa10.39□□□□□ -0.75
SMN2-206ENST00000506734 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
SMN2-206ENST00000506734 C5orf47Q569G3 176 aa10.39□□□□□ -0.75
SMN2-206ENST00000506734 TP53AIP1Q9HCN2 124 aa10.38□□□□□ -0.75
SMN2-206ENST00000506734 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
SMN2-206ENST00000506734 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
SMN2-206ENST00000506734 A0A0U1RQV1 116 aa10.35□□□□□ -0.75
SMN2-206ENST00000506734 LOC100996750A0A140TA64 210 aa10.34□□□□□ -0.75
SMN2-206ENST00000506734 KRTAP4-6Q9BYQ5 205 aa10.34□□□□□ -0.75
SMN2-206ENST00000506734 KRTAP16-1A8MUX0 517 aa10.33□□□□□ -0.76
SMN2-206ENST00000506734 MT1HL1P0DM35 61 aa10.33□□□□□ -0.76
SMN2-206ENST00000506734 SNURFQ9Y675 71 aa10.33□□□□□ -0.76
SMN2-206ENST00000506734 BIRC6Q9NR09 4857 aa10.32□□□□□ -0.76
SMN2-206ENST00000506734 NDUFS5O43920 106 aa10.31□□□□□ -0.76
SMN2-206ENST00000506734 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
SMN2-206ENST00000506734 OXTP01178 125 aa10.3□□□□□ -0.76
SMN2-206ENST00000506734 MP68P56378 58 aa10.3□□□□□ -0.76
SMN2-206ENST00000506734 TRAV22A0A0B4J277 110 aa10.29□□□□□ -0.76
SMN2-206ENST00000506734 H0Y9P7 68 aa10.28□□□□□ -0.76
SMN2-206ENST00000506734 H3BPC8 53 aa10.28□□□□□ -0.76
SMN2-206ENST00000506734 ZCCHC13Q8WW36 166 aaKnown RBP10.28□□□□□ -0.76
SMN2-206ENST00000506734 KRTAP4-5Q9BYR2 181 aa10.28□□□□□ -0.76
SMN2-206ENST00000506734 NDUFC1O43677 76 aa10.27□□□□□ -0.76
SMN2-206ENST00000506734 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
SMN2-206ENST00000506734 H7BZZ5 65 aa10.25□□□□□ -0.77
SMN2-206ENST00000506734 DMBT1Q9UGM3 2413 aaPredicted RBP10.23□□□□□ -0.77
SMN2-206ENST00000506734 HERC2O95714 4834 aa10.23□□□□□ -0.77
SMN2-206ENST00000506734 TMEM258P61165 79 aa10.22□□□□□ -0.77
SMN2-206ENST00000506734 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
SMN2-206ENST00000506734 FP248Q71RG6 208 aaPredicted RBP10.21□□□□□ -0.78
SMN2-206ENST00000506734 KRTAP13-3Q3SY46 172 aa10.2□□□□□ -0.78
SMN2-206ENST00000506734 Q5W150 140 aa10.18□□□□□ -0.78
SMN2-206ENST00000506734 C1orf64Q8NEQ6 169 aa10.18□□□□□ -0.78
SMN2-206ENST00000506734 C9orf92A6NGG3 77 aa10.14□□□□□ -0.79
SMN2-206ENST00000506734 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
SMN2-206ENST00000506734 C20orf166-AS1Q96NR2 134 aa10.13□□□□□ -0.79
SMN2-206ENST00000506734 A8MUU9 505 aa10.1□□□□□ -0.79
SMN2-206ENST00000506734 LOC101927531A0A1B0GV80 90 aa10.09□□□□□ -0.79
SMN2-206ENST00000506734 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
SMN2-206ENST00000506734 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
SMN2-206ENST00000506734 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
SMN2-206ENST00000506734 ATP5EP56381 51 aaPredicted RBP10.06□□□□□ -0.8
SMN2-206ENST00000506734 Q75L30 129 aa10.02□□□□□ -0.81
SMN2-206ENST00000506734 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
SMN2-206ENST00000506734 CYP4F30PQ9H0H9 118 aa10.01□□□□□ -0.81
SMN2-206ENST00000506734 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
SMN2-206ENST00000506734 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
SMN2-206ENST00000506734 PRR4Q16378 134 aa9.97□□□□□ -0.81
SMN2-206ENST00000506734 J3QL48 77 aa9.95□□□□□ -0.82
SMN2-206ENST00000506734 XP32Q5T750 250 aa9.93□□□□□ -0.82
SMN2-206ENST00000506734 RPS28P62857 69 aaKnown RBP9.92□□□□□ -0.82
SMN2-206ENST00000506734 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
SMN2-206ENST00000506734 RPL37P61927 97 aaKnown RBP9.9□□□□□ -0.82
SMN2-206ENST00000506734 SERP1Q9Y6X1 66 aa9.9□□□□□ -0.82
SMN2-206ENST00000506734 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
SMN2-206ENST00000506734 C7orf65Q6ZTY9 151 aa9.88□□□□□ -0.83
SMN2-206ENST00000506734 LCE2BO14633 110 aa9.87□□□□□ -0.83
SMN2-206ENST00000506734 HRES1P13985 223 aa9.84□□□□□ -0.83
SMN2-206ENST00000506734 ATP11AUNQ6ZP68 121 aa9.84□□□□□ -0.83
SMN2-206ENST00000506734 SPINK7P58062 85 aa9.76□□□□□ -0.85
SMN2-206ENST00000506734 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
SMN2-206ENST00000506734 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
SMN2-206ENST00000506734 LPAP08519 4548 aa9.71□□□□□ -0.85
SMN2-206ENST00000506734 LRP2P98164 4655 aa9.71□□□□□ -0.86
SMN2-206ENST00000506734 COA5Q86WW8 74 aa9.67□□□□□ -0.86
SMN2-206ENST00000506734 ACYP2P14621 99 aa9.67□□□□□ -0.86
SMN2-206ENST00000506734 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
SMN2-206ENST00000506734 C4orf26Q17RF5 130 aa9.63□□□□□ -0.87
SMN2-206ENST00000506734 A8MUN3 132 aa9.63□□□□□ -0.87
SMN2-206ENST00000506734 HERC1Q15751 4861 aa9.57□□□□□ -0.88
SMN2-206ENST00000506734 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
SMN2-206ENST00000506734 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
SMN2-206ENST00000506734 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
SMN2-206ENST00000506734 HMCN2Q8NDA2 5059 aa9.5□□□□□ -0.89
SMN2-206ENST00000506734 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
SMN2-206ENST00000506734 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms