RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
LIN54-206ENST00000506560 CASC2Q6XLA1 102 aa7.08□□□□□ -1.28
LIN54-206ENST00000506560 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
LIN54-206ENST00000506560 IGHV6-1A0A0B4J1U7 121 aa7.08□□□□□ -1.28
LIN54-206ENST00000506560 SSBP3-AS1Q7Z2R9 100 aa7.08□□□□□ -1.28
LIN54-206ENST00000506560 PLA2G1BP04054 148 aaKnown RBP7.07□□□□□ -1.28
LIN54-206ENST00000506560 PRR4Q16378 134 aa7.06□□□□□ -1.28
LIN54-206ENST00000506560 PRO0628Q9UI54 55 aa7.05□□□□□ -1.28
LIN54-206ENST00000506560 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
LIN54-206ENST00000506560 NDUFB1O75438 58 aa7.04□□□□□ -1.28
LIN54-206ENST00000506560 PRR26Q8N8Z3 221 aa7.04□□□□□ -1.28
LIN54-206ENST00000506560 hDV103S1A0JD37 113 aa7.03□□□□□ -1.28
LIN54-206ENST00000506560 C1orf64Q8NEQ6 169 aa7.03□□□□□ -1.28
LIN54-206ENST00000506560 A0A1B0GVX0 72 aa7.03□□□□□ -1.28
LIN54-206ENST00000506560 C8orf17Q9NRJ1 99 aa7.03□□□□□ -1.28
LIN54-206ENST00000506560 BRK1Q8WUW1 75 aa7.02□□□□□ -1.29
LIN54-206ENST00000506560 CD164Q04900 197 aa7.02□□□□□ -1.29
LIN54-206ENST00000506560 HSPG2P98160 4391 aa7.01□□□□□ -1.29
LIN54-206ENST00000506560 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
LIN54-206ENST00000506560 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
LIN54-206ENST00000506560 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
LIN54-206ENST00000506560 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
LIN54-206ENST00000506560 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
LIN54-206ENST00000506560 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
LIN54-206ENST00000506560 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
LIN54-206ENST00000506560 KRTAP17-1Q9BYP8 105 aa6.96□□□□□ -1.3
LIN54-206ENST00000506560 MP68P56378 58 aa6.96□□□□□ -1.3
LIN54-206ENST00000506560 NDUFS5O43920 106 aa6.95□□□□□ -1.3
LIN54-206ENST00000506560 TRAV22A0A0B4J277 110 aa6.95□□□□□ -1.3
LIN54-206ENST00000506560 H0Y9P7 68 aa6.95□□□□□ -1.3
LIN54-206ENST00000506560 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
LIN54-206ENST00000506560 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
LIN54-206ENST00000506560 FLG2Q5D862 2391 aaPredicted RBP6.94□□□□□ -1.3
LIN54-206ENST00000506560 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
LIN54-206ENST00000506560 EPPK1P58107 5090 aaKnown RBP6.92□□□□□ -1.3
LIN54-206ENST00000506560 RYR1P21817 5038 aa6.92□□□□□ -1.3
LIN54-206ENST00000506560 PSPHP1O15172 72 aa6.91□□□□□ -1.3
LIN54-206ENST00000506560 Q1T7F1 81 aa6.91□□□□□ -1.3
LIN54-206ENST00000506560 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
LIN54-206ENST00000506560 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.3
LIN54-206ENST00000506560 Q5W150 140 aa6.89□□□□□ -1.31
LIN54-206ENST00000506560 SPINK1P00995 79 aa6.87□□□□□ -1.31
LIN54-206ENST00000506560 LIMD2Q9BT23 127 aa6.87□□□□□ -1.31
LIN54-206ENST00000506560 LINC00313P59037 77 aa6.86□□□□□ -1.31
LIN54-206ENST00000506560 RETNLBQ9BQ08 111 aa6.86□□□□□ -1.31
LIN54-206ENST00000506560 TNXBP22105 4242 aa6.85□□□□□ -1.31
LIN54-206ENST00000506560 Q5VSD8 79 aa6.85□□□□□ -1.31
LIN54-206ENST00000506560 A8MUN3 132 aa6.85□□□□□ -1.31
LIN54-206ENST00000506560 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
LIN54-206ENST00000506560 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
LIN54-206ENST00000506560 H3BPC8 53 aa6.84□□□□□ -1.31
LIN54-206ENST00000506560 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
LIN54-206ENST00000506560 TP53AIP1Q9HCN2 124 aa6.84□□□□□ -1.31
LIN54-206ENST00000506560 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
LIN54-206ENST00000506560 DMBT1Q9UGM3 2413 aaPredicted RBP6.83□□□□□ -1.32
LIN54-206ENST00000506560 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
LIN54-206ENST00000506560 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
LIN54-206ENST00000506560 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
LIN54-206ENST00000506560 A8MU10 97 aa6.79□□□□□ -1.32
LIN54-206ENST00000506560 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
LIN54-206ENST00000506560 Q5VV11 94 aa6.78□□□□□ -1.32
LIN54-206ENST00000506560 Q8N1X5 172 aa6.78□□□□□ -1.32
LIN54-206ENST00000506560 FAT3Q8TDW7 4589 aa6.78□□□□□ -1.32
LIN54-206ENST00000506560 SPAG11AQ6PDA7 123 aa6.78□□□□□ -1.32
LIN54-206ENST00000506560 C9orf92A6NGG3 77 aa6.76□□□□□ -1.33
LIN54-206ENST00000506560 COA5Q86WW8 74 aa6.76□□□□□ -1.33
LIN54-206ENST00000506560 V9GYY9 64 aa6.76□□□□□ -1.33
LIN54-206ENST00000506560 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
LIN54-206ENST00000506560 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
LIN54-206ENST00000506560 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
LIN54-206ENST00000506560 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
LIN54-206ENST00000506560 KRTAP10-8P60410 259 aa6.71□□□□□ -1.33
LIN54-206ENST00000506560 LOC101927531A0A1B0GV80 90 aa6.68□□□□□ -1.34
LIN54-206ENST00000506560 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
LIN54-206ENST00000506560 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
LIN54-206ENST00000506560 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
LIN54-206ENST00000506560 HRES1P13985 223 aa6.65□□□□□ -1.35
LIN54-206ENST00000506560 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
LIN54-206ENST00000506560 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
LIN54-206ENST00000506560 LCA10Q71F78 164 aa6.63□□□□□ -1.35
LIN54-206ENST00000506560 Q75L30 129 aa6.63□□□□□ -1.35
LIN54-206ENST00000506560 A6NED7 52 aa6.63□□□□□ -1.35
LIN54-206ENST00000506560 SPTSSBQ8NFR3 76 aa6.6□□□□□ -1.35
LIN54-206ENST00000506560 C20orf166-AS1Q96NR2 134 aa6.59□□□□□ -1.35
LIN54-206ENST00000506560 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
LIN54-206ENST00000506560 A8MUU9 505 aa6.58□□□□□ -1.36
LIN54-206ENST00000506560 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
LIN54-206ENST00000506560 SPINK7P58062 85 aa6.54□□□□□ -1.36
LIN54-206ENST00000506560 SEC61GP60059 68 aa6.53□□□□□ -1.36
LIN54-206ENST00000506560 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
LIN54-206ENST00000506560 ATP11AUNQ6ZP68 121 aa6.52□□□□□ -1.37
LIN54-206ENST00000506560 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
LIN54-206ENST00000506560 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
LIN54-206ENST00000506560 LPAP08519 4548 aa6.5□□□□□ -1.37
LIN54-206ENST00000506560 LRP2P98164 4655 aa6.48□□□□□ -1.37
LIN54-206ENST00000506560 ACYP2P14621 99 aa6.47□□□□□ -1.37
LIN54-206ENST00000506560 HERC2O95714 4834 aa6.47□□□□□ -1.37
LIN54-206ENST00000506560 A6NN06 94 aa6.47□□□□□ -1.37
LIN54-206ENST00000506560 XP32Q5T750 250 aa6.46□□□□□ -1.37
LIN54-206ENST00000506560 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms