RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ASB16-AS1Q495Z4 193 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 C1orf134Q5TEV5 83 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
PPARGC1A-204ENST00000506055 A8MUN3 132 aa4.53□□□□□ -1.68
PPARGC1A-204ENST00000506055 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
PPARGC1A-204ENST00000506055 LY6G6CO95867 125 aa4.52□□□□□ -1.69
PPARGC1A-204ENST00000506055 CD164Q04900 197 aa4.52□□□□□ -1.69
PPARGC1A-204ENST00000506055 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
PPARGC1A-204ENST00000506055 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
PPARGC1A-204ENST00000506055 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
PPARGC1A-204ENST00000506055 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
PPARGC1A-204ENST00000506055 V9GYY9 64 aa4.51□□□□□ -1.69
PPARGC1A-204ENST00000506055 KRTAP21-3Q3LHN1 58 aa4.5□□□□□ -1.69
PPARGC1A-204ENST00000506055 COA5Q86WW8 74 aa4.5□□□□□ -1.69
PPARGC1A-204ENST00000506055 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
PPARGC1A-204ENST00000506055 DNAH17Q9UFH2 4485 aa4.49□□□□□ -1.69
PPARGC1A-204ENST00000506055 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
PPARGC1A-204ENST00000506055 PRR15LQ9BU68 103 aa4.48□□□□□ -1.69
PPARGC1A-204ENST00000506055 Q5VV11 94 aa4.47□□□□□ -1.69
PPARGC1A-204ENST00000506055 CHKB-CPT1BH3BT56 60 aa4.47□□□□□ -1.69
PPARGC1A-204ENST00000506055 KRTAP10-2P60368 255 aa4.47□□□□□ -1.69
PPARGC1A-204ENST00000506055 LIMD2Q9BT23 127 aa4.47□□□□□ -1.69
PPARGC1A-204ENST00000506055 C1orf195Q5TG92 126 aa4.46□□□□□ -1.69
PPARGC1A-204ENST00000506055 Q5W150 140 aa4.46□□□□□ -1.69
PPARGC1A-204ENST00000506055 A8MU10 97 aa4.45□□□□□ -1.7
PPARGC1A-204ENST00000506055 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
PPARGC1A-204ENST00000506055 SPAG11AQ6PDA7 123 aa4.45□□□□□ -1.7
PPARGC1A-204ENST00000506055 SSBP3-AS1Q7Z2R9 100 aa4.44□□□□□ -1.7
PPARGC1A-204ENST00000506055 HRES1P13985 223 aa4.43□□□□□ -1.7
PPARGC1A-204ENST00000506055 LOC101927531A0A1B0GV80 90 aa4.42□□□□□ -1.7
PPARGC1A-204ENST00000506055 RETNLBQ9BQ08 111 aa4.42□□□□□ -1.7
PPARGC1A-204ENST00000506055 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
PPARGC1A-204ENST00000506055 LINC00313P59037 77 aa4.41□□□□□ -1.7
PPARGC1A-204ENST00000506055 A6NED7 52 aa4.41□□□□□ -1.7
PPARGC1A-204ENST00000506055 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
PPARGC1A-204ENST00000506055 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
PPARGC1A-204ENST00000506055 KRTAP10-1P60331 282 aa4.4□□□□□ -1.7
PPARGC1A-204ENST00000506055 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.71
PPARGC1A-204ENST00000506055 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
PPARGC1A-204ENST00000506055 Q75L30 129 aa4.4□□□□□ -1.71
PPARGC1A-204ENST00000506055 DNAH5Q8TE73 4624 aa4.38□□□□□ -1.71
PPARGC1A-204ENST00000506055 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
PPARGC1A-204ENST00000506055 PRR26Q8N8Z3 221 aa4.38□□□□□ -1.71
PPARGC1A-204ENST00000506055 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
PPARGC1A-204ENST00000506055 LCA10Q71F78 164 aa4.38□□□□□ -1.71
PPARGC1A-204ENST00000506055 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
PPARGC1A-204ENST00000506055 PKD1P98161 4303 aa4.37□□□□□ -1.71
PPARGC1A-204ENST00000506055 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
PPARGC1A-204ENST00000506055 Q6ZSA8 131 aa4.36□□□□□ -1.71
PPARGC1A-204ENST00000506055 HYDINQ4G0P3 5121 aa4.36□□□□□ -1.71
PPARGC1A-204ENST00000506055 FAM229AH3BQW9 127 aa4.36□□□□□ -1.71
PPARGC1A-204ENST00000506055 ACYP2P14621 99 aa4.36□□□□□ -1.71
PPARGC1A-204ENST00000506055 PLA2G1BP04054 148 aaKnown RBP4.35□□□□□ -1.71
PPARGC1A-204ENST00000506055 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
PPARGC1A-204ENST00000506055 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.72
PPARGC1A-204ENST00000506055 SPINK7P58062 85 aa4.33□□□□□ -1.72
PPARGC1A-204ENST00000506055 C4orf48Q5BLP8 95 aa4.33□□□□□ -1.72
PPARGC1A-204ENST00000506055 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 ATP11AUNQ6ZP68 121 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
PPARGC1A-204ENST00000506055 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
PPARGC1A-204ENST00000506055 SPINK1P00995 79 aa4.28□□□□□ -1.72
PPARGC1A-204ENST00000506055 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
PPARGC1A-204ENST00000506055 A0A1B0GU69 56 aa4.26□□□□□ -1.73
PPARGC1A-204ENST00000506055 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
PPARGC1A-204ENST00000506055 SMR3BP02814 79 aaPredicted RBP4.25□□□□□ -1.73
PPARGC1A-204ENST00000506055 A6NN06 94 aa4.25□□□□□ -1.73
PPARGC1A-204ENST00000506055 SEC61GP60059 68 aa4.25□□□□□ -1.73
PPARGC1A-204ENST00000506055 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
PPARGC1A-204ENST00000506055 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
PPARGC1A-204ENST00000506055 Q8N1X5 172 aa4.21□□□□□ -1.74
PPARGC1A-204ENST00000506055 C9orf92A6NGG3 77 aa4.21□□□□□ -1.74
PPARGC1A-204ENST00000506055 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
PPARGC1A-204ENST00000506055 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
PPARGC1A-204ENST00000506055 RPS29P62273 56 aaKnown RBP4.18□□□□□ -1.74
PPARGC1A-204ENST00000506055 UQCR11O14957 56 aa4.17□□□□□ -1.74
PPARGC1A-204ENST00000506055 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
PPARGC1A-204ENST00000506055 SPATA8Q6RVD6 105 aa4.16□□□□□ -1.74
PPARGC1A-204ENST00000506055 RBM12B-AS1Q9P1G2 102 aa4.15□□□□□ -1.74
PPARGC1A-204ENST00000506055 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
PPARGC1A-204ENST00000506055 RYR3Q15413 4870 aa4.13□□□□□ -1.75
PPARGC1A-204ENST00000506055 FAT1Q14517 4588 aa4.13□□□□□ -1.75
PPARGC1A-204ENST00000506055 XP32Q5T750 250 aa4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 A8MUU9 505 aa4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 DYNC1H1Q14204 4646 aaKnown RBP4.12□□□□□ -1.75
PPARGC1A-204ENST00000506055 KRTAP9-2Q9BYQ4 174 aa4.1□□□□□ -1.75
PPARGC1A-204ENST00000506055 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
PPARGC1A-204ENST00000506055 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
PPARGC1A-204ENST00000506055 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
PPARGC1A-204ENST00000506055 J3QL48 77 aa4.09□□□□□ -1.75
PPARGC1A-204ENST00000506055 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms