RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 C14orf132Q9NPU4 83 aa5.78□□□□□ -1.48
NR1I3-222ENST00000506018 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
NR1I3-222ENST00000506018 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
NR1I3-222ENST00000506018 CCKP06307 115 aa5.76□□□□□ -1.49
NR1I3-222ENST00000506018 Q6ZQT0 140 aa5.76□□□□□ -1.49
NR1I3-222ENST00000506018 Q6Q795 121 aa5.75□□□□□ -1.49
NR1I3-222ENST00000506018 VPS25Q9BRG1 176 aa5.75□□□□□ -1.49
NR1I3-222ENST00000506018 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
NR1I3-222ENST00000506018 Q5XG85 94 aa5.74□□□□□ -1.49
NR1I3-222ENST00000506018 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
NR1I3-222ENST00000506018 SS18L2Q9UHA2 77 aa5.73□□□□□ -1.49
NR1I3-222ENST00000506018 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
NR1I3-222ENST00000506018 ACYP1P07311 99 aa5.72□□□□□ -1.49
NR1I3-222ENST00000506018 TRBV7-7A0A0K0K1E9 115 aa5.71□□□□□ -1.5
NR1I3-222ENST00000506018 K7ERU9 68 aa5.71□□□□□ -1.5
NR1I3-222ENST00000506018 A0A1W2PNM2 257 aa5.7□□□□□ -1.5
NR1I3-222ENST00000506018 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
NR1I3-222ENST00000506018 A0A0G2JQZ4 141 aa5.68□□□□□ -1.5
NR1I3-222ENST00000506018 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
NR1I3-222ENST00000506018 A0A087WSZ3 146 aa5.67□□□□□ -1.5
NR1I3-222ENST00000506018 PCOTHQ58A44 107 aa5.67□□□□□ -1.5
NR1I3-222ENST00000506018 C1orf195Q5TG92 126 aa5.67□□□□□ -1.5
NR1I3-222ENST00000506018 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
NR1I3-222ENST00000506018 UBL5Q9BZL1 73 aa5.67□□□□□ -1.5
NR1I3-222ENST00000506018 NREPQ16612 68 aa5.67□□□□□ -1.5
NR1I3-222ENST00000506018 LCE1DQ5T752 114 aa5.65□□□□□ -1.51
NR1I3-222ENST00000506018 J3KT08 172 aa5.62□□□□□ -1.51
NR1I3-222ENST00000506018 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
NR1I3-222ENST00000506018 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
NR1I3-222ENST00000506018 LINC00846Q9NV44 126 aa5.62□□□□□ -1.51
NR1I3-222ENST00000506018 Q6ZVQ6 151 aa5.6□□□□□ -1.51
NR1I3-222ENST00000506018 BPY2O14599 106 aa5.59□□□□□ -1.51
NR1I3-222ENST00000506018 SIGMAR1Q99720 223 aa5.59□□□□□ -1.51
NR1I3-222ENST00000506018 NDUFB1O75438 58 aa5.58□□□□□ -1.52
NR1I3-222ENST00000506018 ATP5EP2Q5VTU8 51 aa5.58□□□□□ -1.52
NR1I3-222ENST00000506018 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
NR1I3-222ENST00000506018 IGKV4-1P06312 121 aa5.57□□□□□ -1.52
NR1I3-222ENST00000506018 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
NR1I3-222ENST00000506018 CXCL6P80162 114 aa5.56□□□□□ -1.52
NR1I3-222ENST00000506018 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
NR1I3-222ENST00000506018 ATP11AUNQ6ZP68 121 aa5.55□□□□□ -1.52
NR1I3-222ENST00000506018 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
NR1I3-222ENST00000506018 Q96NJ1 140 aa5.55□□□□□ -1.52
NR1I3-222ENST00000506018 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
NR1I3-222ENST00000506018 A8MWP4 228 aa5.53□□□□□ -1.52
NR1I3-222ENST00000506018 MT1HP80294 61 aa5.53□□□□□ -1.52
NR1I3-222ENST00000506018 M0R2T5 61 aa5.52□□□□□ -1.53
NR1I3-222ENST00000506018 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
NR1I3-222ENST00000506018 Q75L30 129 aa5.52□□□□□ -1.53
NR1I3-222ENST00000506018 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
NR1I3-222ENST00000506018 IGKV3D-7A0A0C4DH55 119 aa5.49□□□□□ -1.53
NR1I3-222ENST00000506018 A0A1B0GVX0 72 aa5.49□□□□□ -1.53
NR1I3-222ENST00000506018 C8orf87E5RJ46 101 aa5.49□□□□□ -1.53
NR1I3-222ENST00000506018 DSCR10P59022 87 aa5.49□□□□□ -1.53
NR1I3-222ENST00000506018 PRR15Q8IV56 129 aa5.49□□□□□ -1.53
NR1I3-222ENST00000506018 IGHV6-1A0A0B4J1U7 121 aa5.48□□□□□ -1.53
NR1I3-222ENST00000506018 LINC00313P59037 77 aa5.48□□□□□ -1.53
NR1I3-222ENST00000506018 HIST1H4AP62805 103 aaKnown RBP5.48□□□□□ -1.53
NR1I3-222ENST00000506018 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
NR1I3-222ENST00000506018 IMUPQ9GZP8 106 aa5.48□□□□□ -1.53
NR1I3-222ENST00000506018 K7EQZ3 153 aa5.46□□□□□ -1.54
NR1I3-222ENST00000506018 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
NR1I3-222ENST00000506018 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
NR1I3-222ENST00000506018 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
NR1I3-222ENST00000506018 Q8N9L7 120 aa5.43□□□□□ -1.54
NR1I3-222ENST00000506018 C8orf17Q9NRJ1 99 aa5.43□□□□□ -1.54
NR1I3-222ENST00000506018 A8MUU9 505 aa5.42□□□□□ -1.54
NR1I3-222ENST00000506018 HCG22E2RYF7 251 aa5.42□□□□□ -1.54
NR1I3-222ENST00000506018 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
NR1I3-222ENST00000506018 hDV103S1A0JD37 113 aa5.42□□□□□ -1.54
NR1I3-222ENST00000506018 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
NR1I3-222ENST00000506018 CASC2Q6XLA1 102 aa5.42□□□□□ -1.54
NR1I3-222ENST00000506018 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
NR1I3-222ENST00000506018 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.55
NR1I3-222ENST00000506018 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.55
NR1I3-222ENST00000506018 WFDC13Q8IUB5 93 aa5.39□□□□□ -1.55
NR1I3-222ENST00000506018 MRPL34Q9BQ48 92 aaKnown RBP5.39□□□□□ -1.55
NR1I3-222ENST00000506018 SCGB1A1P11684 91 aa5.37□□□□□ -1.55
NR1I3-222ENST00000506018 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
NR1I3-222ENST00000506018 A0A087WVE0 104 aa5.36□□□□□ -1.55
NR1I3-222ENST00000506018 NOTCH2NLQ7Z3S9 236 aa5.36□□□□□ -1.55
NR1I3-222ENST00000506018 NDUFS5O43920 106 aa5.35□□□□□ -1.55
NR1I3-222ENST00000506018 TP53AIP1Q9HCN2 124 aa5.35□□□□□ -1.55
NR1I3-222ENST00000506018 FAM236DA0A1B0GTK5 79 aa5.34□□□□□ -1.55
NR1I3-222ENST00000506018 FAM236CP0DP71 79 aa5.34□□□□□ -1.55
NR1I3-222ENST00000506018 Q8N9P0 234 aaPredicted RBP5.34□□□□□ -1.55
NR1I3-222ENST00000506018 KRTAP16-1A8MUX0 517 aa5.33□□□□□ -1.56
NR1I3-222ENST00000506018 FAM236AA0A1B0GUQ0 79 aa5.32□□□□□ -1.56
NR1I3-222ENST00000506018 FAM236BA0A1B0GV22 79 aa5.32□□□□□ -1.56
NR1I3-222ENST00000506018 SMIM20Q8N5G0 67 aa5.32□□□□□ -1.56
NR1I3-222ENST00000506018 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
NR1I3-222ENST00000506018 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
NR1I3-222ENST00000506018 ATOX1O00244 68 aa5.3□□□□□ -1.56
NR1I3-222ENST00000506018 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
NR1I3-222ENST00000506018 UQCRQO14949 82 aa5.28□□□□□ -1.56
NR1I3-222ENST00000506018 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
NR1I3-222ENST00000506018 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
NR1I3-222ENST00000506018 TRAV7A0A075B6U4 112 aa5.25□□□□□ -1.57
NR1I3-222ENST00000506018 C5orf47Q569G3 176 aa5.25□□□□□ -1.57
NR1I3-222ENST00000506018 ANAPC13Q9BS18 74 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms