RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
SGCA-205ENST00000505964 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
SGCA-205ENST00000505964 C1orf195Q5TG92 126 aa6.43□□□□□ -1.38
SGCA-205ENST00000505964 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
SGCA-205ENST00000505964 IGKV4-1P06312 121 aa6.41□□□□□ -1.38
SGCA-205ENST00000505964 DEFB116Q30KQ4 102 aa6.4□□□□□ -1.38
SGCA-205ENST00000505964 A8MWP4 228 aa6.39□□□□□ -1.39
SGCA-205ENST00000505964 DSCR10P59022 87 aa6.39□□□□□ -1.39
SGCA-205ENST00000505964 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
SGCA-205ENST00000505964 NDUFB1O75438 58 aa6.37□□□□□ -1.39
SGCA-205ENST00000505964 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
SGCA-205ENST00000505964 FP248Q71RG6 208 aaPredicted RBP6.36□□□□□ -1.39
SGCA-205ENST00000505964 A0A0U1RQV1 116 aa6.35□□□□□ -1.39
SGCA-205ENST00000505964 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SGCA-205ENST00000505964 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
SGCA-205ENST00000505964 K7EQZ3 153 aa6.34□□□□□ -1.39
SGCA-205ENST00000505964 PRR4Q16378 134 aa6.33□□□□□ -1.4
SGCA-205ENST00000505964 RETNLBQ9BQ08 111 aa6.33□□□□□ -1.4
SGCA-205ENST00000505964 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
SGCA-205ENST00000505964 HIST1H4AP62805 103 aaKnown RBP6.32□□□□□ -1.4
SGCA-205ENST00000505964 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
SGCA-205ENST00000505964 Q8N9L7 120 aa6.32□□□□□ -1.4
SGCA-205ENST00000505964 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
SGCA-205ENST00000505964 LINC00313P59037 77 aa6.28□□□□□ -1.4
SGCA-205ENST00000505964 C8orf17Q9NRJ1 99 aa6.28□□□□□ -1.4
SGCA-205ENST00000505964 IGLV7-46A0A075B6I9 117 aa6.27□□□□□ -1.41
SGCA-205ENST00000505964 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
SGCA-205ENST00000505964 HCG22E2RYF7 251 aa6.27□□□□□ -1.41
SGCA-205ENST00000505964 A0A087WVE0 104 aa6.26□□□□□ -1.41
SGCA-205ENST00000505964 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
SGCA-205ENST00000505964 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
SGCA-205ENST00000505964 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
SGCA-205ENST00000505964 TMEM254Q8TBM7 123 aa6.24□□□□□ -1.41
SGCA-205ENST00000505964 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
SGCA-205ENST00000505964 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
SGCA-205ENST00000505964 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
SGCA-205ENST00000505964 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
SGCA-205ENST00000505964 WFDC13Q8IUB5 93 aa6.22□□□□□ -1.41
SGCA-205ENST00000505964 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
SGCA-205ENST00000505964 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
SGCA-205ENST00000505964 FAM236AA0A1B0GUQ0 79 aa6.2□□□□□ -1.42
SGCA-205ENST00000505964 FAM236BA0A1B0GV22 79 aa6.2□□□□□ -1.42
SGCA-205ENST00000505964 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
SGCA-205ENST00000505964 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
SGCA-205ENST00000505964 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
SGCA-205ENST00000505964 ATOX1O00244 68 aa6.16□□□□□ -1.42
SGCA-205ENST00000505964 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
SGCA-205ENST00000505964 A8MUU9 505 aa6.15□□□□□ -1.42
SGCA-205ENST00000505964 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
SGCA-205ENST00000505964 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
SGCA-205ENST00000505964 XP32Q5T750 250 aa6.13□□□□□ -1.43
SGCA-205ENST00000505964 Q75L30 129 aa6.13□□□□□ -1.43
SGCA-205ENST00000505964 NDUFS5O43920 106 aa6.12□□□□□ -1.43
SGCA-205ENST00000505964 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
SGCA-205ENST00000505964 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
SGCA-205ENST00000505964 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
SGCA-205ENST00000505964 UQCRQO14949 82 aa6.1□□□□□ -1.43
SGCA-205ENST00000505964 RPL37P61927 97 aaKnown RBP6.1□□□□□ -1.43
SGCA-205ENST00000505964 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
SGCA-205ENST00000505964 COX7CP15954 63 aa6.07□□□□□ -1.44
SGCA-205ENST00000505964 LCE2DQ5TA82 110 aaPredicted RBP6.07□□□□□ -1.44
SGCA-205ENST00000505964 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
SGCA-205ENST00000505964 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
SGCA-205ENST00000505964 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
SGCA-205ENST00000505964 ATP11AUNQ6ZP68 121 aa6.05□□□□□ -1.44
SGCA-205ENST00000505964 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
SGCA-205ENST00000505964 Q5W150 140 aa6.03□□□□□ -1.44
SGCA-205ENST00000505964 H0Y9P7 68 aa6.01□□□□□ -1.45
SGCA-205ENST00000505964 H3BPC8 53 aa6.01□□□□□ -1.45
SGCA-205ENST00000505964 MP68P56378 58 aa6.01□□□□□ -1.45
SGCA-205ENST00000505964 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
SGCA-205ENST00000505964 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
SGCA-205ENST00000505964 PCOTHQ58A44 107 aa5.97□□□□□ -1.45
SGCA-205ENST00000505964 LINC00208Q96KT6 92 aa5.96□□□□□ -1.46
SGCA-205ENST00000505964 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.46
SGCA-205ENST00000505964 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
SGCA-205ENST00000505964 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
SGCA-205ENST00000505964 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
SGCA-205ENST00000505964 C20orf197Q8N268 126 aa5.93□□□□□ -1.46
SGCA-205ENST00000505964 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
SGCA-205ENST00000505964 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
SGCA-205ENST00000505964 SPINK7P58062 85 aa5.91□□□□□ -1.46
SGCA-205ENST00000505964 CYP4F30PQ9H0H9 118 aa5.91□□□□□ -1.46
SGCA-205ENST00000505964 CYSTM1Q9H1C7 97 aa5.88□□□□□ -1.47
SGCA-205ENST00000505964 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
SGCA-205ENST00000505964 NDUFC1O43677 76 aa5.86□□□□□ -1.47
SGCA-205ENST00000505964 TMEM258P61165 79 aa5.85□□□□□ -1.47
SGCA-205ENST00000505964 LCE2CQ5TA81 110 aa5.85□□□□□ -1.47
SGCA-205ENST00000505964 H7BZZ5 65 aa5.81□□□□□ -1.48
SGCA-205ENST00000505964 HRES1P13985 223 aa5.81□□□□□ -1.48
SGCA-205ENST00000505964 MT1HP80294 61 aa5.8□□□□□ -1.48
SGCA-205ENST00000505964 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
SGCA-205ENST00000505964 SPANXA2-OT1Q8N9U9 137 aa5.79□□□□□ -1.48
SGCA-205ENST00000505964 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
SGCA-205ENST00000505964 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
SGCA-205ENST00000505964 MPLKIPQ8TAP9 179 aa5.78□□□□□ -1.48
SGCA-205ENST00000505964 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
SGCA-205ENST00000505964 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
SGCA-205ENST00000505964 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
SGCA-205ENST00000505964 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms