RNA–Protein interactions for RNA: ENST00000505857.2

TOP1MT-202, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 1 (best)

Gene TOP1MT, Length 2,029 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-202ENST00000505857 Q1T7F1 81 aa9.9□□□□□ -0.82
TOP1MT-202ENST00000505857 C1orf195Q5TG92 126 aa9.9□□□□□ -0.82
TOP1MT-202ENST00000505857 A8MWP4 228 aa9.88□□□□□ -0.83
TOP1MT-202ENST00000505857 PRR15Q8IV56 129 aa9.87□□□□□ -0.83
TOP1MT-202ENST00000505857 BIRC6Q9NR09 4857 aa9.86□□□□□ -0.83
TOP1MT-202ENST00000505857 Q5VSD8 79 aa9.85□□□□□ -0.83
TOP1MT-202ENST00000505857 CYP4F30PQ9H0H9 118 aa9.85□□□□□ -0.83
TOP1MT-202ENST00000505857 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
TOP1MT-202ENST00000505857 C1orf64Q8NEQ6 169 aa9.85□□□□□ -0.83
TOP1MT-202ENST00000505857 FAM229AH3BQW9 127 aa9.84□□□□□ -0.83
TOP1MT-202ENST00000505857 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
TOP1MT-202ENST00000505857 PKHD1L1Q86WI1 4243 aa9.84□□□□□ -0.83
TOP1MT-202ENST00000505857 IGLV9-49A0A0B4J1Y8 123 aa9.83□□□□□ -0.84
TOP1MT-202ENST00000505857 KRTAP1-4P0C5Y4 121 aa9.83□□□□□ -0.84
TOP1MT-202ENST00000505857 SPINK6Q6UWN8 80 aa9.83□□□□□ -0.84
TOP1MT-202ENST00000505857 V9GYY9 64 aa9.83□□□□□ -0.84
TOP1MT-202ENST00000505857 NDUFB1O75438 58 aa9.82□□□□□ -0.84
TOP1MT-202ENST00000505857 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
TOP1MT-202ENST00000505857 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
TOP1MT-202ENST00000505857 Q8N1X5 172 aa9.8□□□□□ -0.84
TOP1MT-202ENST00000505857 A0A087X002 238 aa9.79□□□□□ -0.84
TOP1MT-202ENST00000505857 Q96NJ1 140 aa9.77□□□□□ -0.85
TOP1MT-202ENST00000505857 MP68P56378 58 aa9.77□□□□□ -0.85
TOP1MT-202ENST00000505857 MOBPQ13875 183 aa9.76□□□□□ -0.85
TOP1MT-202ENST00000505857 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
TOP1MT-202ENST00000505857 H3BPC8 53 aa9.75□□□□□ -0.85
TOP1MT-202ENST00000505857 KRTAP4-5Q9BYR2 181 aa9.75□□□□□ -0.85
TOP1MT-202ENST00000505857 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
TOP1MT-202ENST00000505857 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
TOP1MT-202ENST00000505857 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
TOP1MT-202ENST00000505857 HERC2O95714 4834 aa9.7□□□□□ -0.86
TOP1MT-202ENST00000505857 ASB16-AS1Q495Z4 193 aa9.69□□□□□ -0.86
TOP1MT-202ENST00000505857 PRR26Q8N8Z3 221 aa9.69□□□□□ -0.86
TOP1MT-202ENST00000505857 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
TOP1MT-202ENST00000505857 H0Y9P7 68 aa9.68□□□□□ -0.86
TOP1MT-202ENST00000505857 SEC61GP60059 68 aa9.68□□□□□ -0.86
TOP1MT-202ENST00000505857 PMAIP1Q13794 54 aa9.66□□□□□ -0.86
TOP1MT-202ENST00000505857 LINC00208Q96KT6 92 aa9.66□□□□□ -0.86
TOP1MT-202ENST00000505857 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
TOP1MT-202ENST00000505857 PSPHP1O15172 72 aa9.66□□□□□ -0.86
TOP1MT-202ENST00000505857 C8orf17Q9NRJ1 99 aa9.66□□□□□ -0.86
TOP1MT-202ENST00000505857 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
TOP1MT-202ENST00000505857 CD164Q04900 197 aa9.65□□□□□ -0.86
TOP1MT-202ENST00000505857 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.86
TOP1MT-202ENST00000505857 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.87
TOP1MT-202ENST00000505857 SSBP3-AS1Q7Z2R9 100 aa9.63□□□□□ -0.87
TOP1MT-202ENST00000505857 PRR4Q16378 134 aa9.62□□□□□ -0.87
TOP1MT-202ENST00000505857 TNXBP22105 4242 aa9.62□□□□□ -0.87
TOP1MT-202ENST00000505857 MYCBP2O75592 4640 aa9.61□□□□□ -0.87
TOP1MT-202ENST00000505857 ABCA13Q86UQ4 5058 aa9.61□□□□□ -0.87
TOP1MT-202ENST00000505857 TYMSOSQ8TAI1 123 aa9.61□□□□□ -0.87
TOP1MT-202ENST00000505857 A8MUN3 132 aa9.6□□□□□ -0.87
TOP1MT-202ENST00000505857 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
TOP1MT-202ENST00000505857 IGHV6-1A0A0B4J1U7 121 aa9.59□□□□□ -0.87
TOP1MT-202ENST00000505857 Q5VV11 94 aa9.58□□□□□ -0.88
TOP1MT-202ENST00000505857 MRPL34Q9BQ48 92 aaKnown RBP9.56□□□□□ -0.88
TOP1MT-202ENST00000505857 Q8N9P0 234 aaPredicted RBP9.55□□□□□ -0.88
TOP1MT-202ENST00000505857 KRTAP10-8P60410 259 aa9.55□□□□□ -0.88
TOP1MT-202ENST00000505857 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
TOP1MT-202ENST00000505857 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
TOP1MT-202ENST00000505857 NDUFS5O43920 106 aa9.49□□□□□ -0.89
TOP1MT-202ENST00000505857 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
TOP1MT-202ENST00000505857 CHKB-CPT1BH3BT56 60 aa9.48□□□□□ -0.89
TOP1MT-202ENST00000505857 Q75L30 129 aa9.47□□□□□ -0.89
TOP1MT-202ENST00000505857 IGLV7-46A0A075B6I9 117 aa9.46□□□□□ -0.89
TOP1MT-202ENST00000505857 LOC101927531A0A1B0GV80 90 aa9.46□□□□□ -0.89
TOP1MT-202ENST00000505857 NOTCH2NLQ7Z3S9 236 aa9.46□□□□□ -0.89
TOP1MT-202ENST00000505857 PRR15LQ9BU68 103 aa9.45□□□□□ -0.9
TOP1MT-202ENST00000505857 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
TOP1MT-202ENST00000505857 SPINK1P00995 79 aa9.43□□□□□ -0.9
TOP1MT-202ENST00000505857 COA5Q86WW8 74 aa9.43□□□□□ -0.9
TOP1MT-202ENST00000505857 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
TOP1MT-202ENST00000505857 A8MU10 97 aa9.4□□□□□ -0.9
TOP1MT-202ENST00000505857 SPAG11AQ6PDA7 123 aa9.4□□□□□ -0.9
TOP1MT-202ENST00000505857 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
TOP1MT-202ENST00000505857 KTN1-AS1Q86SY8 53 aa9.39□□□□□ -0.91
TOP1MT-202ENST00000505857 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
TOP1MT-202ENST00000505857 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
TOP1MT-202ENST00000505857 LINC00313P59037 77 aa9.36□□□□□ -0.91
TOP1MT-202ENST00000505857 LCA10Q71F78 164 aa9.36□□□□□ -0.91
TOP1MT-202ENST00000505857 PCLOQ9Y6V0 5065 aa9.35□□□□□ -0.91
TOP1MT-202ENST00000505857 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
TOP1MT-202ENST00000505857 A6NED7 52 aa9.34□□□□□ -0.91
TOP1MT-202ENST00000505857 CDC42SE1Q9NRR8 79 aa9.34□□□□□ -0.91
TOP1MT-202ENST00000505857 LINC01558Q9Y6Z2 57 aa9.34□□□□□ -0.91
TOP1MT-202ENST00000505857 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
TOP1MT-202ENST00000505857 Q5W150 140 aa9.31□□□□□ -0.92
TOP1MT-202ENST00000505857 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
TOP1MT-202ENST00000505857 A6NN06 94 aa9.29□□□□□ -0.92
TOP1MT-202ENST00000505857 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
TOP1MT-202ENST00000505857 J3QL48 77 aa9.24□□□□□ -0.93
TOP1MT-202ENST00000505857 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.93
TOP1MT-202ENST00000505857 HRES1P13985 223 aa9.21□□□□□ -0.94
TOP1MT-202ENST00000505857 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
TOP1MT-202ENST00000505857 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
TOP1MT-202ENST00000505857 ACYP2P14621 99 aa9.12□□□□□ -0.95
TOP1MT-202ENST00000505857 SPINK7P58062 85 aa9.12□□□□□ -0.95
TOP1MT-202ENST00000505857 DMAC1Q96GE9 116 aa9.12□□□□□ -0.95
TOP1MT-202ENST00000505857 HERC1Q15751 4861 aa9.09□□□□□ -0.95
TOP1MT-202ENST00000505857 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms