RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TENM3Q9P273 2699 aa0.44□□□□□ -2.34
HMGB1P22-201ENST00000505315 TNRC18O15417 2968 aaPredicted RBP0.44□□□□□ -2.34
HMGB1P22-201ENST00000505315 M0QZ58 72 aa0.44□□□□□ -2.34
HMGB1P22-201ENST00000505315 POLR2KP53803 58 aaKnown RBP0.44□□□□□ -2.34
HMGB1P22-201ENST00000505315 KRTAP5-10Q6L8G5 202 aa0.44□□□□□ -2.34
HMGB1P22-201ENST00000505315 HMCN1Q96RW7 5635 aa0.43□□□□□ -2.34
HMGB1P22-201ENST00000505315 PRRC2CQ9Y520 2896 aaKnown RBP0.42□□□□□ -2.34
HMGB1P22-201ENST00000505315 DMBT1Q9UGM3 2413 aaPredicted RBP0.42□□□□□ -2.34
HMGB1P22-201ENST00000505315 SPTBN4Q9H254 2564 aa0.42□□□□□ -2.34
HMGB1P22-201ENST00000505315 NSD1Q96L73 2696 aaPredicted RBP0.41□□□□□ -2.34
HMGB1P22-201ENST00000505315 MYCBP2O75592 4640 aa0.41□□□□□ -2.34
HMGB1P22-201ENST00000505315 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.34
HMGB1P22-201ENST00000505315 FLNBO75369 2602 aaKnown RBP0.4□□□□□ -2.34
HMGB1P22-201ENST00000505315 PRKDCP78527 4128 aaKnown RBP0.4□□□□□ -2.35
HMGB1P22-201ENST00000505315 LPAP08519 4548 aa0.39□□□□□ -2.35
HMGB1P22-201ENST00000505315 MTORP42345 2549 aa0.39□□□□□ -2.35
HMGB1P22-201ENST00000505315 CELSR1Q9NYQ6 3014 aa0.39□□□□□ -2.35
HMGB1P22-201ENST00000505315 FAT4Q6V0I7 4981 aa0.38□□□□□ -2.35
HMGB1P22-201ENST00000505315 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
HMGB1P22-201ENST00000505315 SNRPGP62308 76 aaKnown RBP0.37□□□□□ -2.35
HMGB1P22-201ENST00000505315 SPART-AS1P0CW21 52 aa0.36□□□□□ -2.35
HMGB1P22-201ENST00000505315 SPRR2AP35326 72 aa0.36□□□□□ -2.35
HMGB1P22-201ENST00000505315 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
HMGB1P22-201ENST00000505315 GCN1Q92616 2671 aaKnown RBP0.34□□□□□ -2.35
HMGB1P22-201ENST00000505315 SONP18583 2426 aaKnown RBP0.34□□□□□ -2.35
HMGB1P22-201ENST00000505315 RPL39P62891 51 aaKnown RBP0.34□□□□□ -2.36
HMGB1P22-201ENST00000505315 CLPSL2Q6UWE3 100 aa0.34□□□□□ -2.36
HMGB1P22-201ENST00000505315 TOMM7Q9P0U1 55 aa0.34□□□□□ -2.36
HMGB1P22-201ENST00000505315 NF1P21359 2839 aa0.34□□□□□ -2.36
HMGB1P22-201ENST00000505315 FLNCQ14315 2725 aa0.34□□□□□ -2.36
HMGB1P22-201ENST00000505315 KMT2AQ03164 3969 aa0.33□□□□□ -2.36
HMGB1P22-201ENST00000505315 SPG11Q96JI7 2443 aa0.33□□□□□ -2.36
HMGB1P22-201ENST00000505315 ACACAQ13085 2346 aa0.33□□□□□ -2.36
HMGB1P22-201ENST00000505315 HSPG2P98160 4391 aa0.32□□□□□ -2.36
HMGB1P22-201ENST00000505315 MAST4O15021 2626 aa0.32□□□□□ -2.36
HMGB1P22-201ENST00000505315 DCHS2Q6V1P9 2916 aa0.31□□□□□ -2.36
HMGB1P22-201ENST00000505315 ANKHD1Q8IWZ3 2542 aaKnown RBP0.31□□□□□ -2.36
HMGB1P22-201ENST00000505315 SRRM2Q9UQ35 2752 aaKnown RBP0.3□□□□□ -2.36
HMGB1P22-201ENST00000505315 LRRK2Q5S007 2527 aa0.3□□□□□ -2.36
HMGB1P22-201ENST00000505315 SETD2Q9BYW2 2564 aaPredicted RBP0.3□□□□□ -2.36
HMGB1P22-201ENST00000505315 STAB1Q9NY15 2570 aa0.3□□□□□ -2.36
HMGB1P22-201ENST00000505315 SPRR2GQ9BYE4 73 aa0.3□□□□□ -2.36
HMGB1P22-201ENST00000505315 FLNAP21333 2647 aaKnown RBP0.3□□□□□ -2.36
HMGB1P22-201ENST00000505315 LYSTQ99698 3801 aa0.29□□□□□ -2.36
HMGB1P22-201ENST00000505315 UTP20O75691 2785 aaKnown RBP0.29□□□□□ -2.36
HMGB1P22-201ENST00000505315 FASNP49327 2511 aaKnown RBP0.28□□□□□ -2.36
HMGB1P22-201ENST00000505315 RPL39LQ96EH5 51 aaKnown RBP0.28□□□□□ -2.36
HMGB1P22-201ENST00000505315 HECTD4Q9Y4D8 3996 aa0.27□□□□□ -2.37
HMGB1P22-201ENST00000505315 LEAP2Q969E1 77 aa0.27□□□□□ -2.37
HMGB1P22-201ENST00000505315 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
HMGB1P22-201ENST00000505315 MT1AP04731 61 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 SPRR2EP22531 72 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 MROH2BQ7Z745 1585 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 EPG5Q9HCE0 2579 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 DMXL1Q9Y485 3027 aa0.26□□□□□ -2.37
HMGB1P22-201ENST00000505315 COL6A3P12111 3177 aa0.25□□□□□ -2.37
HMGB1P22-201ENST00000505315 ANKRD11Q6UB99 2663 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P22-201ENST00000505315 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
HMGB1P22-201ENST00000505315 CUBNO60494 3623 aa0.24□□□□□ -2.37
HMGB1P22-201ENST00000505315 TENM2Q9NT68 2774 aa0.23□□□□□ -2.37
HMGB1P22-201ENST00000505315 PKD1P98161 4303 aa0.23□□□□□ -2.37
HMGB1P22-201ENST00000505315 ACACBO00763 2458 aa0.23□□□□□ -2.37
HMGB1P22-201ENST00000505315 FAM186AA6NE01 2351 aa0.23□□□□□ -2.37
HMGB1P22-201ENST00000505315 SPRR2FQ96RM1 72 aa0.23□□□□□ -2.37
HMGB1P22-201ENST00000505315 DNAH9Q9NYC9 4486 aa0.22□□□□□ -2.37
HMGB1P22-201ENST00000505315 COL6A5A8TX70 2615 aa0.22□□□□□ -2.37
HMGB1P22-201ENST00000505315 VPS13BQ7Z7G8 4022 aa0.22□□□□□ -2.37
HMGB1P22-201ENST00000505315 ZZEF1O43149 2961 aa0.21□□□□□ -2.38
HMGB1P22-201ENST00000505315 DUOX1Q9NRD9 1551 aa0.21□□□□□ -2.38
HMGB1P22-201ENST00000505315 PDZD2O15018 2839 aa0.21□□□□□ -2.38
HMGB1P22-201ENST00000505315 CCDC168Q8NDH2 2452 aa0.2□□□□□ -2.38
HMGB1P22-201ENST00000505315 PKHD1P08F94 4074 aa0.2□□□□□ -2.38
HMGB1P22-201ENST00000505315 LRP2P98164 4655 aa0.19□□□□□ -2.38
HMGB1P22-201ENST00000505315 DEFB1P60022 68 aa0.19□□□□□ -2.38
HMGB1P22-201ENST00000505315 KRTAP8-1Q8IUC2 63 aa0.19□□□□□ -2.38
HMGB1P22-201ENST00000505315 SACSQ9NZJ4 4579 aa0.19□□□□□ -2.38
HMGB1P22-201ENST00000505315 ANK3Q12955 4377 aaKnown RBP0.19□□□□□ -2.38
HMGB1P22-201ENST00000505315 MGAM2Q2M2H8 2515 aa0.18□□□□□ -2.38
HMGB1P22-201ENST00000505315 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
HMGB1P22-201ENST00000505315 TEP1Q99973 2627 aaKnown RBP0.18□□□□□ -2.38
HMGB1P22-201ENST00000505315 TGP01266 2768 aa0.18□□□□□ -2.38
HMGB1P22-201ENST00000505315 MUC5BQ9HC84 5762 aaPredicted RBP0.18□□□□□ -2.38
HMGB1P22-201ENST00000505315 NBEAL1Q6ZS30 2694 aa0.18□□□□□ -2.38
HMGB1P22-201ENST00000505315 SVEP1Q4LDE5 3571 aa0.17□□□□□ -2.38
HMGB1P22-201ENST00000505315 MYO18BQ8IUG5 2567 aa0.17□□□□□ -2.38
HMGB1P22-201ENST00000505315 AHNAKQ09666 5890 aaKnown RBP0.17□□□□□ -2.38
HMGB1P22-201ENST00000505315 FLGP20930 4061 aaPredicted RBP0.17□□□□□ -2.38
HMGB1P22-201ENST00000505315 TACC2O95359 2948 aa0.17□□□□□ -2.38
HMGB1P22-201ENST00000505315 NBEAL2Q6ZNJ1 2754 aa0.16□□□□□ -2.38
HMGB1P22-201ENST00000505315 GCC2Q8IWJ2 1684 aa0.16□□□□□ -2.38
HMGB1P22-201ENST00000505315 STAB2Q8WWQ8 2551 aa0.16□□□□□ -2.38
HMGB1P22-201ENST00000505315 LINC01590Q5TEZ4 76 aa0.15□□□□□ -2.39
HMGB1P22-201ENST00000505315 A0A0C4DFX4 3053 aa0.15□□□□□ -2.39
HMGB1P22-201ENST00000505315 DNAH3Q8TD57 4116 aa0.15□□□□□ -2.39
HMGB1P22-201ENST00000505315 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
HMGB1P22-201ENST00000505315 PKHD1L1Q86WI1 4243 aa0.14□□□□□ -2.39
HMGB1P22-201ENST00000505315 NBEAQ8NFP9 2946 aa0.14□□□□□ -2.39
HMGB1P22-201ENST00000505315 MUC5ACP98088 5654 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms