RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 UQCR10Q9UDW1 63 aa9.95□□□□□ -0.82
UBE2D3-220ENST00000505307 SSPOA2VEC9 5147 aa9.95□□□□□ -0.82
UBE2D3-220ENST00000505307 SCGB1C2P0DMR2 95 aa9.94□□□□□ -0.82
UBE2D3-220ENST00000505307 J3KT08 172 aa9.93□□□□□ -0.82
UBE2D3-220ENST00000505307 MT2AP02795 61 aa9.93□□□□□ -0.82
UBE2D3-220ENST00000505307 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.92□□□□□ -0.82
UBE2D3-220ENST00000505307 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
UBE2D3-220ENST00000505307 KRTAP9-7A8MTY7 169 aa9.88□□□□□ -0.83
UBE2D3-220ENST00000505307 C9JAW5 83 aa9.88□□□□□ -0.83
UBE2D3-220ENST00000505307 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-220ENST00000505307 BAALC-AS2P0C853 105 aa9.86□□□□□ -0.83
UBE2D3-220ENST00000505307 NDUFB1O75438 58 aa9.85□□□□□ -0.83
UBE2D3-220ENST00000505307 MT1FP04733 61 aa9.84□□□□□ -0.83
UBE2D3-220ENST00000505307 KRTAP10-10P60014 251 aa9.84□□□□□ -0.83
UBE2D3-220ENST00000505307 Q6ZQT0 140 aa9.84□□□□□ -0.83
UBE2D3-220ENST00000505307 A0A1B0GW54 56 aa9.82□□□□□ -0.84
UBE2D3-220ENST00000505307 SPINK7P58062 85 aa9.82□□□□□ -0.84
UBE2D3-220ENST00000505307 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-220ENST00000505307 KRTAP9-3Q9BYQ3 159 aa9.8□□□□□ -0.84
UBE2D3-220ENST00000505307 JMJD7-PLA2G4BH0Y9G9 81 aa9.79□□□□□ -0.84
UBE2D3-220ENST00000505307 LCE2BO14633 110 aa9.77□□□□□ -0.85
UBE2D3-220ENST00000505307 FCGBPQ9Y6R7 5405 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-220ENST00000505307 PDE6GP18545 87 aa9.76□□□□□ -0.85
UBE2D3-220ENST00000505307 A8MWP4 228 aa9.75□□□□□ -0.85
UBE2D3-220ENST00000505307 ATXN8Q156A1 80 aa9.75□□□□□ -0.85
UBE2D3-220ENST00000505307 LOC110117498A0A087WWA1 95 aa9.74□□□□□ -0.85
UBE2D3-220ENST00000505307 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
UBE2D3-220ENST00000505307 LYRM7Q5U5X0 104 aa9.73□□□□□ -0.85
UBE2D3-220ENST00000505307 KRTAP19-1Q8IUB9 90 aa9.72□□□□□ -0.85
UBE2D3-220ENST00000505307 M0R143 59 aa9.7□□□□□ -0.86
UBE2D3-220ENST00000505307 TMA7Q9Y2S6 64 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-220ENST00000505307 IGKV3D-7A0A0C4DH55 119 aa9.68□□□□□ -0.86
UBE2D3-220ENST00000505307 WFDC13Q8IUB5 93 aa9.68□□□□□ -0.86
UBE2D3-220ENST00000505307 Q6ZVQ6 151 aa9.67□□□□□ -0.86
UBE2D3-220ENST00000505307 PRR15Q8IV56 129 aa9.64□□□□□ -0.87
UBE2D3-220ENST00000505307 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
UBE2D3-220ENST00000505307 NREPQ16612 68 aa9.63□□□□□ -0.87
UBE2D3-220ENST00000505307 C14orf132Q9NPU4 83 aa9.63□□□□□ -0.87
UBE2D3-220ENST00000505307 NAA38Q9BRA0 125 aaKnown RBP9.62□□□□□ -0.87
UBE2D3-220ENST00000505307 TMEM254Q8TBM7 123 aa9.59□□□□□ -0.87
UBE2D3-220ENST00000505307 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
UBE2D3-220ENST00000505307 MACF1Q9UPN3 7388 aaKnown RBP9.56□□□□□ -0.88
UBE2D3-220ENST00000505307 MMP24-AS1A0A0U1RRL7 71 aa9.55□□□□□ -0.88
UBE2D3-220ENST00000505307 SYNE2Q8WXH0 6885 aaKnown RBP9.55□□□□□ -0.88
UBE2D3-220ENST00000505307 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
UBE2D3-220ENST00000505307 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
UBE2D3-220ENST00000505307 H1FX-AS1Q4G0G2 97 aa9.52□□□□□ -0.89
UBE2D3-220ENST00000505307 NDUFS5O43920 106 aa9.48□□□□□ -0.89
UBE2D3-220ENST00000505307 K7EQZ3 153 aa9.47□□□□□ -0.89
UBE2D3-220ENST00000505307 H3BT86 120 aa9.45□□□□□ -0.9
UBE2D3-220ENST00000505307 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
UBE2D3-220ENST00000505307 BPY2O14599 106 aa9.42□□□□□ -0.9
UBE2D3-220ENST00000505307 C7orf65Q6ZTY9 151 aa9.41□□□□□ -0.9
UBE2D3-220ENST00000505307 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.9
UBE2D3-220ENST00000505307 TSTD3H0UI37 97 aa9.4□□□□□ -0.9
UBE2D3-220ENST00000505307 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
UBE2D3-220ENST00000505307 BATFQ16520 125 aa9.39□□□□□ -0.91
UBE2D3-220ENST00000505307 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
UBE2D3-220ENST00000505307 Q5W150 140 aa9.36□□□□□ -0.91
UBE2D3-220ENST00000505307 A0A1W2PPM0 123 aa9.33□□□□□ -0.92
UBE2D3-220ENST00000505307 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
UBE2D3-220ENST00000505307 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
UBE2D3-220ENST00000505307 TAX1BP3O14907 124 aa9.29□□□□□ -0.92
UBE2D3-220ENST00000505307 CXCL6P80162 114 aa9.28□□□□□ -0.92
UBE2D3-220ENST00000505307 Q8N9L7 120 aa9.26□□□□□ -0.93
UBE2D3-220ENST00000505307 C4orf26Q17RF5 130 aa9.25□□□□□ -0.93
UBE2D3-220ENST00000505307 KRTAP6-3Q3LI67 103 aa9.19□□□□□ -0.94
UBE2D3-220ENST00000505307 UBL5Q9BZL1 73 aa9.18□□□□□ -0.94
UBE2D3-220ENST00000505307 SPCS1Q9Y6A9 102 aa9.18□□□□□ -0.94
UBE2D3-220ENST00000505307 C5orf47Q569G3 176 aa9.14□□□□□ -0.95
UBE2D3-220ENST00000505307 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
UBE2D3-220ENST00000505307 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
UBE2D3-220ENST00000505307 SMCPP49901 116 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-220ENST00000505307 CSAG1Q6PB30 78 aa9.11□□□□□ -0.95
UBE2D3-220ENST00000505307 S4R3F8 94 aa9.11□□□□□ -0.95
UBE2D3-220ENST00000505307 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
UBE2D3-220ENST00000505307 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
UBE2D3-220ENST00000505307 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
UBE2D3-220ENST00000505307 PRO0461Q9UI25 63 aa9.04□□□□□ -0.96
UBE2D3-220ENST00000505307 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
UBE2D3-220ENST00000505307 Q5VV11 94 aa9.02□□□□□ -0.97
UBE2D3-220ENST00000505307 LCA10Q71F78 164 aa9.02□□□□□ -0.97
UBE2D3-220ENST00000505307 A6NN06 94 aa9.01□□□□□ -0.97
UBE2D3-220ENST00000505307 COL5A1-AS1Q5SY13 56 aa9.01□□□□□ -0.97
UBE2D3-220ENST00000505307 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
UBE2D3-220ENST00000505307 MT1BP07438 61 aa8.99□□□□□ -0.97
UBE2D3-220ENST00000505307 K7EP34 96 aa8.98□□□□□ -0.97
UBE2D3-220ENST00000505307 KRTAP19-8Q3LI54 63 aa8.98□□□□□ -0.97
UBE2D3-220ENST00000505307 NEBP20929 6669 aa8.97□□□□□ -0.97
UBE2D3-220ENST00000505307 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
UBE2D3-220ENST00000505307 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
UBE2D3-220ENST00000505307 CYP4F30PQ9H0H9 118 aa8.88□□□□□ -0.99
UBE2D3-220ENST00000505307 MUC12Q9UKN1 5478 aa8.86□□□□□ -0.99
UBE2D3-220ENST00000505307 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
UBE2D3-220ENST00000505307 KRTAP3-3Q9BYR6 98 aa8.86□□□□□ -0.99
UBE2D3-220ENST00000505307 F8W1H4 67 aa8.85□□□□□ -0.99
UBE2D3-220ENST00000505307 CRIPTQ9P021 101 aa8.85□□□□□ -0.99
UBE2D3-220ENST00000505307 LOC101927531A0A1B0GV80 90 aa8.81□□□□□ -1
UBE2D3-220ENST00000505307 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
UBE2D3-220ENST00000505307 ETDBQ3ZM63 59 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms