RNA–Protein interactions for RNA: ENST00000505089.6

LINC00504-201, long intergenic non-protein coding RNA 504, humanhuman

TSL 2 BASIC

Gene LINC00504, Length 4,672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-201ENST00000505089 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
LINC00504-201ENST00000505089 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
LINC00504-201ENST00000505089 KRTAP10-3P60369 221 aa3.33□□□□□ -1.88
LINC00504-201ENST00000505089 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
LINC00504-201ENST00000505089 MMP24-AS1A0A0U1RRL7 71 aa3.32□□□□□ -1.88
LINC00504-201ENST00000505089 VWFP04275 2813 aa3.32□□□□□ -1.88
LINC00504-201ENST00000505089 TRRAPQ9Y4A5 3859 aa3.32□□□□□ -1.88
LINC00504-201ENST00000505089 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
LINC00504-201ENST00000505089 HIVEP1P15822 2718 aa3.3□□□□□ -1.88
LINC00504-201ENST00000505089 KRTAP17-1Q9BYP8 105 aa3.3□□□□□ -1.88
LINC00504-201ENST00000505089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.3□□□□□ -1.88
LINC00504-201ENST00000505089 ITPR2Q14571 2701 aa3.3□□□□□ -1.88
LINC00504-201ENST00000505089 TENM3Q9P273 2699 aa3.28□□□□□ -1.88
LINC00504-201ENST00000505089 APCP25054 2843 aa3.27□□□□□ -1.89
LINC00504-201ENST00000505089 A0A0A0MQY5 61 aa3.27□□□□□ -1.89
LINC00504-201ENST00000505089 TNP2Q05952 138 aa3.27□□□□□ -1.89
LINC00504-201ENST00000505089 LINC00472Q9H8W2 130 aa3.27□□□□□ -1.89
LINC00504-201ENST00000505089 PKD1L1Q8TDX9 2849 aa3.27□□□□□ -1.89
LINC00504-201ENST00000505089 Q5W150 140 aa3.26□□□□□ -1.89
LINC00504-201ENST00000505089 ANK2Q01484 3957 aa3.26□□□□□ -1.89
LINC00504-201ENST00000505089 SPRR1AP35321 89 aa3.26□□□□□ -1.89
LINC00504-201ENST00000505089 Q6ZSA8 131 aa3.25□□□□□ -1.89
LINC00504-201ENST00000505089 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
LINC00504-201ENST00000505089 Q5VSD8 79 aa3.25□□□□□ -1.89
LINC00504-201ENST00000505089 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
LINC00504-201ENST00000505089 TENM4Q6N022 2769 aa3.24□□□□□ -1.89
LINC00504-201ENST00000505089 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
LINC00504-201ENST00000505089 FBN1P35555 2871 aaKnown RBP3.24□□□□□ -1.89
LINC00504-201ENST00000505089 OTOGQ6ZRI0 2925 aa3.23□□□□□ -1.89
LINC00504-201ENST00000505089 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
LINC00504-201ENST00000505089 KRTAP1-3Q8IUG1 177 aa3.22□□□□□ -1.89
LINC00504-201ENST00000505089 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
LINC00504-201ENST00000505089 KRTAP1-1Q07627 177 aa3.22□□□□□ -1.89
LINC00504-201ENST00000505089 R4GN34 69 aa3.22□□□□□ -1.89
LINC00504-201ENST00000505089 TENM1Q9UKZ4 2725 aa3.21□□□□□ -1.89
LINC00504-201ENST00000505089 LYSTQ99698 3801 aa3.21□□□□□ -1.9
LINC00504-201ENST00000505089 SPRR1BP22528 89 aa3.2□□□□□ -1.9
LINC00504-201ENST00000505089 ROMO1P60602 79 aa3.19□□□□□ -1.9
LINC00504-201ENST00000505089 SPATA8Q6RVD6 105 aa3.19□□□□□ -1.9
LINC00504-201ENST00000505089 KRTAP26-1Q6PEX3 210 aa3.19□□□□□ -1.9
LINC00504-201ENST00000505089 A8MU10 97 aa3.19□□□□□ -1.9
LINC00504-201ENST00000505089 S4R3F8 94 aa3.19□□□□□ -1.9
LINC00504-201ENST00000505089 KRTAP1-5Q9BYS1 174 aa3.18□□□□□ -1.9
LINC00504-201ENST00000505089 ADM2Q7Z4H4 148 aa3.17□□□□□ -1.9
LINC00504-201ENST00000505089 PLAC8Q9NZF1 115 aa3.17□□□□□ -1.9
LINC00504-201ENST00000505089 KRTAP29-1A8MX34 341 aaPredicted RBP3.17□□□□□ -1.9
LINC00504-201ENST00000505089 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
LINC00504-201ENST00000505089 KRTAP16-1A8MUX0 517 aa3.16□□□□□ -1.9
LINC00504-201ENST00000505089 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.9
LINC00504-201ENST00000505089 A0A087X002 238 aa3.15□□□□□ -1.91
LINC00504-201ENST00000505089 Q6ZR54 194 aa3.15□□□□□ -1.91
LINC00504-201ENST00000505089 NOTCH2NLQ7Z3S9 236 aa3.15□□□□□ -1.91
LINC00504-201ENST00000505089 COL7A1Q02388 2944 aa3.15□□□□□ -1.91
LINC00504-201ENST00000505089 M0QZ58 72 aa3.14□□□□□ -1.91
LINC00504-201ENST00000505089 A6NN06 94 aa3.14□□□□□ -1.91
LINC00504-201ENST00000505089 KRTAP4-16G5E9R7 235 aaPredicted RBP3.13□□□□□ -1.91
LINC00504-201ENST00000505089 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
LINC00504-201ENST00000505089 PANO1I0J062 215 aa3.13□□□□□ -1.91
LINC00504-201ENST00000505089 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
LINC00504-201ENST00000505089 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
LINC00504-201ENST00000505089 KRTAP3-3Q9BYR6 98 aa3.11□□□□□ -1.91
LINC00504-201ENST00000505089 KRTAP3-2Q9BYR7 98 aa3.11□□□□□ -1.91
LINC00504-201ENST00000505089 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
LINC00504-201ENST00000505089 TENM2Q9NT68 2774 aa3.1□□□□□ -1.91
LINC00504-201ENST00000505089 SRRM2Q9UQ35 2752 aaKnown RBP3.09□□□□□ -1.91
LINC00504-201ENST00000505089 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
LINC00504-201ENST00000505089 KRTAP10-2P60368 255 aa3.08□□□□□ -1.92
LINC00504-201ENST00000505089 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
LINC00504-201ENST00000505089 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
LINC00504-201ENST00000505089 LCE6AA0A183 80 aa3.06□□□□□ -1.92
LINC00504-201ENST00000505089 SEC61BP60468 96 aaKnown RBP3.06□□□□□ -1.92
LINC00504-201ENST00000505089 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
LINC00504-201ENST00000505089 KRTAP7-1Q8IUC3 87 aa3.02□□□□□ -1.93
LINC00504-201ENST00000505089 DNAH7Q8WXX0 4024 aa3.02□□□□□ -1.93
LINC00504-201ENST00000505089 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
LINC00504-201ENST00000505089 TGP01266 2768 aa3.02□□□□□ -1.93
LINC00504-201ENST00000505089 A8MUU9 505 aa3.01□□□□□ -1.93
LINC00504-201ENST00000505089 DNAH10Q8IVF4 4471 aa3□□□□□ -1.93
LINC00504-201ENST00000505089 LCE2BO14633 110 aa3□□□□□ -1.93
LINC00504-201ENST00000505089 P0C880 135 aa2.97□□□□□ -1.93
LINC00504-201ENST00000505089 C10orf95Q9H7T3 257 aa2.97□□□□□ -1.93
LINC00504-201ENST00000505089 KRTAP13-2Q52LG2 175 aa2.96□□□□□ -1.93
LINC00504-201ENST00000505089 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
LINC00504-201ENST00000505089 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
LINC00504-201ENST00000505089 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
LINC00504-201ENST00000505089 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
LINC00504-201ENST00000505089 DYNC2H1Q8NCM8 4307 aaKnown RBP2.93□□□□□ -1.94
LINC00504-201ENST00000505089 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
LINC00504-201ENST00000505089 PRKDCP78527 4128 aaKnown RBP2.92□□□□□ -1.94
LINC00504-201ENST00000505089 DNAH9Q9NYC9 4486 aa2.91□□□□□ -1.94
LINC00504-201ENST00000505089 FRAS1Q86XX4 4008 aa2.91□□□□□ -1.94
LINC00504-201ENST00000505089 TNP1P09430 55 aa2.91□□□□□ -1.94
LINC00504-201ENST00000505089 KRTAP9-6A0A140TA67 174 aa2.9□□□□□ -1.94
LINC00504-201ENST00000505089 H0YAA0 97 aa2.89□□□□□ -1.95
LINC00504-201ENST00000505089 RPS29P62273 56 aaKnown RBP2.89□□□□□ -1.95
LINC00504-201ENST00000505089 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
LINC00504-201ENST00000505089 KRTAP21-3Q3LHN1 58 aa2.84□□□□□ -1.95
LINC00504-201ENST00000505089 KMT2AQ03164 3969 aa2.84□□□□□ -1.96
LINC00504-201ENST00000505089 VPS13DQ5THJ4 4388 aa2.83□□□□□ -1.96
LINC00504-201ENST00000505089 HECTD4Q9Y4D8 3996 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms