RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
RFC1-210ENST00000505077 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
RFC1-210ENST00000505077 SIGMAR1Q99720 223 aa5.73□□□□□ -1.49
RFC1-210ENST00000505077 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
RFC1-210ENST00000505077 IGKV4-1P06312 121 aa5.72□□□□□ -1.49
RFC1-210ENST00000505077 Q6ZVQ6 151 aa5.72□□□□□ -1.49
RFC1-210ENST00000505077 Q75L30 129 aa5.72□□□□□ -1.49
RFC1-210ENST00000505077 LINC00846Q9NV44 126 aa5.72□□□□□ -1.49
RFC1-210ENST00000505077 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
RFC1-210ENST00000505077 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
RFC1-210ENST00000505077 NDUFB1O75438 58 aa5.69□□□□□ -1.5
RFC1-210ENST00000505077 A8MWP4 228 aa5.68□□□□□ -1.5
RFC1-210ENST00000505077 BPY2O14599 106 aa5.68□□□□□ -1.5
RFC1-210ENST00000505077 HMCN2Q8NDA2 5059 aa5.67□□□□□ -1.5
RFC1-210ENST00000505077 A0A1B0GVX0 72 aa5.67□□□□□ -1.5
RFC1-210ENST00000505077 K7ERU9 68 aa5.67□□□□□ -1.5
RFC1-210ENST00000505077 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
RFC1-210ENST00000505077 ATP5EP2Q5VTU8 51 aa5.67□□□□□ -1.5
RFC1-210ENST00000505077 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
RFC1-210ENST00000505077 CXCL6P80162 114 aa5.66□□□□□ -1.5
RFC1-210ENST00000505077 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
RFC1-210ENST00000505077 IGHV6-1A0A0B4J1U7 121 aa5.64□□□□□ -1.51
RFC1-210ENST00000505077 DSCR10P59022 87 aa5.64□□□□□ -1.51
RFC1-210ENST00000505077 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
RFC1-210ENST00000505077 LRP2P98164 4655 aa5.63□□□□□ -1.51
RFC1-210ENST00000505077 IGKV3D-7A0A0C4DH55 119 aa5.63□□□□□ -1.51
RFC1-210ENST00000505077 LINC00313P59037 77 aa5.63□□□□□ -1.51
RFC1-210ENST00000505077 LINC00643Q86TS7 51 aa5.63□□□□□ -1.51
RFC1-210ENST00000505077 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
RFC1-210ENST00000505077 LPAP08519 4548 aa5.61□□□□□ -1.51
RFC1-210ENST00000505077 K7EQZ3 153 aa5.61□□□□□ -1.51
RFC1-210ENST00000505077 XP32Q5T750 250 aa5.61□□□□□ -1.51
RFC1-210ENST00000505077 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
RFC1-210ENST00000505077 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
RFC1-210ENST00000505077 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
RFC1-210ENST00000505077 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
RFC1-210ENST00000505077 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
RFC1-210ENST00000505077 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
RFC1-210ENST00000505077 A8MUU9 505 aa5.56□□□□□ -1.52
RFC1-210ENST00000505077 RPL37P61927 97 aaKnown RBP5.56□□□□□ -1.52
RFC1-210ENST00000505077 Q8N9L7 120 aa5.56□□□□□ -1.52
RFC1-210ENST00000505077 TMEM254Q8TBM7 123 aa5.56□□□□□ -1.52
RFC1-210ENST00000505077 hDV103S1A0JD37 113 aa5.55□□□□□ -1.52
RFC1-210ENST00000505077 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
RFC1-210ENST00000505077 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
RFC1-210ENST00000505077 CASC2Q6XLA1 102 aa5.53□□□□□ -1.52
RFC1-210ENST00000505077 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
RFC1-210ENST00000505077 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
RFC1-210ENST00000505077 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
RFC1-210ENST00000505077 IMUPQ9GZP8 106 aa5.51□□□□□ -1.53
RFC1-210ENST00000505077 ATP11AUNQ6ZP68 121 aa5.5□□□□□ -1.53
RFC1-210ENST00000505077 WFDC13Q8IUB5 93 aa5.5□□□□□ -1.53
RFC1-210ENST00000505077 NDUFS5O43920 106 aa5.46□□□□□ -1.54
RFC1-210ENST00000505077 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
RFC1-210ENST00000505077 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
RFC1-210ENST00000505077 ZCCHC13Q8WW36 166 aaKnown RBP5.45□□□□□ -1.54
RFC1-210ENST00000505077 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
RFC1-210ENST00000505077 MT-ATP8P03928 68 aa5.44□□□□□ -1.54
RFC1-210ENST00000505077 A0A087WVE0 104 aa5.43□□□□□ -1.54
RFC1-210ENST00000505077 UBR4Q5T4S7 5183 aa5.43□□□□□ -1.54
RFC1-210ENST00000505077 UQCRQO14949 82 aa5.37□□□□□ -1.55
RFC1-210ENST00000505077 SCGB1A1P11684 91 aa5.36□□□□□ -1.55
RFC1-210ENST00000505077 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
RFC1-210ENST00000505077 FAM236AA0A1B0GUQ0 79 aa5.35□□□□□ -1.55
RFC1-210ENST00000505077 FAM236BA0A1B0GV22 79 aa5.35□□□□□ -1.55
RFC1-210ENST00000505077 SMIM20Q8N5G0 67 aa5.35□□□□□ -1.55
RFC1-210ENST00000505077 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
RFC1-210ENST00000505077 ATOX1O00244 68 aa5.34□□□□□ -1.55
RFC1-210ENST00000505077 Q5W150 140 aa5.34□□□□□ -1.55
RFC1-210ENST00000505077 A0A0U1RQV1 116 aa5.33□□□□□ -1.56
RFC1-210ENST00000505077 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
RFC1-210ENST00000505077 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
RFC1-210ENST00000505077 SPINK7P58062 85 aa5.32□□□□□ -1.56
RFC1-210ENST00000505077 MUC2Q02817 5179 aa5.31□□□□□ -1.56
RFC1-210ENST00000505077 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
RFC1-210ENST00000505077 RNF213Q63HN8 5207 aa5.29□□□□□ -1.56
RFC1-210ENST00000505077 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
RFC1-210ENST00000505077 LOC101927531A0A1B0GV80 90 aa5.29□□□□□ -1.56
RFC1-210ENST00000505077 H0Y9P7 68 aa5.29□□□□□ -1.56
RFC1-210ENST00000505077 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
RFC1-210ENST00000505077 MP68P56378 58 aa5.29□□□□□ -1.56
RFC1-210ENST00000505077 TRAV7A0A075B6U4 112 aa5.28□□□□□ -1.56
RFC1-210ENST00000505077 H3BPC8 53 aa5.28□□□□□ -1.56
RFC1-210ENST00000505077 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
RFC1-210ENST00000505077 HRES1P13985 223 aa5.26□□□□□ -1.57
RFC1-210ENST00000505077 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
RFC1-210ENST00000505077 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
RFC1-210ENST00000505077 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
RFC1-210ENST00000505077 SERP2Q8N6R1 65 aa5.23□□□□□ -1.57
RFC1-210ENST00000505077 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
RFC1-210ENST00000505077 SEC61GP60059 68 aa5.22□□□□□ -1.57
RFC1-210ENST00000505077 COX6B2Q6YFQ2 88 aa5.22□□□□□ -1.57
RFC1-210ENST00000505077 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
RFC1-210ENST00000505077 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
RFC1-210ENST00000505077 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
RFC1-210ENST00000505077 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
RFC1-210ENST00000505077 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
RFC1-210ENST00000505077 COX7CP15954 63 aa5.15□□□□□ -1.59
RFC1-210ENST00000505077 C4orf26Q17RF5 130 aa5.15□□□□□ -1.59
RFC1-210ENST00000505077 ANAPC13Q9BS18 74 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms