RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 CREBBPQ92793 2442 aa0.43□□□□□ -2.34
TRAPPC13-206ENST00000504751 NCOR2Q9Y618 2525 aa0.43□□□□□ -2.34
TRAPPC13-206ENST00000504751 SRRM2Q9UQ35 2752 aaKnown RBP0.43□□□□□ -2.34
TRAPPC13-206ENST00000504751 ATP7AQ04656 1500 aa0.43□□□□□ -2.34
TRAPPC13-206ENST00000504751 SETXQ7Z333 2677 aaKnown RBP0.42□□□□□ -2.34
TRAPPC13-206ENST00000504751 PTPN13Q12923 2485 aa0.42□□□□□ -2.34
TRAPPC13-206ENST00000504751 HIVEP3Q5T1R4 2406 aa0.42□□□□□ -2.34
TRAPPC13-206ENST00000504751 NDUFA1O15239 70 aa0.42□□□□□ -2.34
TRAPPC13-206ENST00000504751 SPRR2DP22532 72 aa0.42□□□□□ -2.34
TRAPPC13-206ENST00000504751 LPAP08519 4548 aa0.41□□□□□ -2.34
TRAPPC13-206ENST00000504751 MMP24-AS1A0A0U1RRL7 71 aa0.41□□□□□ -2.34
TRAPPC13-206ENST00000504751 ZZEF1O43149 2961 aa0.41□□□□□ -2.34
TRAPPC13-206ENST00000504751 TRPM2O94759 1503 aa0.4□□□□□ -2.35
TRAPPC13-206ENST00000504751 CLTCL1P53675 1640 aa0.4□□□□□ -2.35
TRAPPC13-206ENST00000504751 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
TRAPPC13-206ENST00000504751 HECTD4Q9Y4D8 3996 aa0.4□□□□□ -2.35
TRAPPC13-206ENST00000504751 DCHS2Q6V1P9 2916 aa0.39□□□□□ -2.35
TRAPPC13-206ENST00000504751 SACSQ9NZJ4 4579 aa0.39□□□□□ -2.35
TRAPPC13-206ENST00000504751 NF1P21359 2839 aa0.38□□□□□ -2.35
TRAPPC13-206ENST00000504751 SAMD9LQ8IVG5 1584 aa0.38□□□□□ -2.35
TRAPPC13-206ENST00000504751 NSD1Q96L73 2696 aaPredicted RBP0.38□□□□□ -2.35
TRAPPC13-206ENST00000504751 DMXL1Q9Y485 3027 aa0.38□□□□□ -2.35
TRAPPC13-206ENST00000504751 H3BNG1 76 aa0.37□□□□□ -2.35
TRAPPC13-206ENST00000504751 NOP10Q9NPE3 64 aaKnown RBP0.37□□□□□ -2.35
TRAPPC13-206ENST00000504751 HSPG2P98160 4391 aa0.36□□□□□ -2.35
TRAPPC13-206ENST00000504751 SVEP1Q4LDE5 3571 aa0.36□□□□□ -2.35
TRAPPC13-206ENST00000504751 IGSF10Q6WRI0 2623 aa0.36□□□□□ -2.35
TRAPPC13-206ENST00000504751 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
TRAPPC13-206ENST00000504751 STAB1Q9NY15 2570 aa0.36□□□□□ -2.35
TRAPPC13-206ENST00000504751 CACNA1AO00555 2505 aa0.35□□□□□ -2.35
TRAPPC13-206ENST00000504751 FLNBO75369 2602 aaKnown RBP0.35□□□□□ -2.35
TRAPPC13-206ENST00000504751 FLNCQ14315 2725 aa0.35□□□□□ -2.35
TRAPPC13-206ENST00000504751 SPTBN5Q9NRC6 3674 aaKnown RBP0.34□□□□□ -2.35
TRAPPC13-206ENST00000504751 DEFB131AP59861 70 aa0.34□□□□□ -2.36
TRAPPC13-206ENST00000504751 PKD1P98161 4303 aa0.34□□□□□ -2.36
TRAPPC13-206ENST00000504751 DNAH11Q96DT5 4516 aa0.34□□□□□ -2.36
TRAPPC13-206ENST00000504751 FLGP20930 4061 aaPredicted RBP0.34□□□□□ -2.36
TRAPPC13-206ENST00000504751 PKHD1L1Q86WI1 4243 aa0.33□□□□□ -2.36
TRAPPC13-206ENST00000504751 SPRR2BP35325 72 aa0.33□□□□□ -2.36
TRAPPC13-206ENST00000504751 ACACAQ13085 2346 aa0.33□□□□□ -2.36
TRAPPC13-206ENST00000504751 GCN1Q92616 2671 aaKnown RBP0.33□□□□□ -2.36
TRAPPC13-206ENST00000504751 COL6A5A8TX70 2615 aa0.33□□□□□ -2.36
TRAPPC13-206ENST00000504751 DNAH3Q8TD57 4116 aa0.32□□□□□ -2.36
TRAPPC13-206ENST00000504751 SPTBN4Q9H254 2564 aa0.32□□□□□ -2.36
TRAPPC13-206ENST00000504751 C9orf92A6NGG3 77 aa0.32□□□□□ -2.36
TRAPPC13-206ENST00000504751 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
TRAPPC13-206ENST00000504751 SONP18583 2426 aaKnown RBP0.32□□□□□ -2.36
TRAPPC13-206ENST00000504751 DMBT1Q9UGM3 2413 aaPredicted RBP0.31□□□□□ -2.36
TRAPPC13-206ENST00000504751 M0QY20 66 aa0.31□□□□□ -2.36
TRAPPC13-206ENST00000504751 TACC2O95359 2948 aa0.31□□□□□ -2.36
TRAPPC13-206ENST00000504751 LRP1BQ9NZR2 4599 aa0.31□□□□□ -2.36
TRAPPC13-206ENST00000504751 AKAP9Q99996 3911 aa0.3□□□□□ -2.36
TRAPPC13-206ENST00000504751 MAST4O15021 2626 aa0.3□□□□□ -2.36
TRAPPC13-206ENST00000504751 ANK3Q12955 4377 aaKnown RBP0.29□□□□□ -2.36
TRAPPC13-206ENST00000504751 KALRNO60229 2985 aa0.28□□□□□ -2.36
TRAPPC13-206ENST00000504751 GPR98Q8WXG9 6306 aa0.28□□□□□ -2.36
TRAPPC13-206ENST00000504751 CLPSL2Q6UWE3 100 aa0.28□□□□□ -2.36
TRAPPC13-206ENST00000504751 COL12A1Q99715 3063 aa0.28□□□□□ -2.36
TRAPPC13-206ENST00000504751 NBEAL2Q6ZNJ1 2754 aa0.28□□□□□ -2.37
TRAPPC13-206ENST00000504751 CHD7Q9P2D1 2997 aa0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 KMT2DO14686 5537 aa0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 VPS13DQ5THJ4 4388 aa0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 A8MTW9 85 aa0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 SNRPGP62308 76 aaKnown RBP0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 COL6A3P12111 3177 aa0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 TENM2Q9NT68 2774 aa0.27□□□□□ -2.37
TRAPPC13-206ENST00000504751 DNAH9Q9NYC9 4486 aa0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 SPG11Q96JI7 2443 aa0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 MTORP42345 2549 aa0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 POLR2KP53803 58 aaKnown RBP0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 DEFB110Q30KQ9 67 aa0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 DNAH2Q9P225 4427 aa0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 LRRK2Q5S007 2527 aa0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 RANBP2P49792 3224 aaKnown RBP0.26□□□□□ -2.37
TRAPPC13-206ENST00000504751 DYNC2H1Q8NCM8 4307 aaKnown RBP0.25□□□□□ -2.37
TRAPPC13-206ENST00000504751 DNAH6Q9C0G6 4158 aa0.25□□□□□ -2.37
TRAPPC13-206ENST00000504751 SETD2Q9BYW2 2564 aaPredicted RBP0.25□□□□□ -2.37
TRAPPC13-206ENST00000504751 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
TRAPPC13-206ENST00000504751 NBPF19A0A087WUL8 3843 aa0.25□□□□□ -2.37
TRAPPC13-206ENST00000504751 APOBP04114 4563 aaKnown RBP0.25□□□□□ -2.37
TRAPPC13-206ENST00000504751 ZFHX4Q86UP3 3567 aa0.24□□□□□ -2.37
TRAPPC13-206ENST00000504751 FAM186AA6NE01 2351 aa0.24□□□□□ -2.37
TRAPPC13-206ENST00000504751 M0QZ58 72 aa0.24□□□□□ -2.37
TRAPPC13-206ENST00000504751 RPL39P62891 51 aaKnown RBP0.24□□□□□ -2.37
TRAPPC13-206ENST00000504751 MROH2BQ7Z745 1585 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 ZANQ9Y493 2812 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 PKHD1P08F94 4074 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 TNP1P09430 55 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 FRYQ5TBA9 3013 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 DUOX1Q9NRD9 1551 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 LAMA5O15230 3695 aa0.23□□□□□ -2.37
TRAPPC13-206ENST00000504751 ANKHD1Q8IWZ3 2542 aaKnown RBP0.22□□□□□ -2.37
TRAPPC13-206ENST00000504751 RIF1Q5UIP0 2472 aaKnown RBP0.22□□□□□ -2.37
TRAPPC13-206ENST00000504751 SPRR2AP35326 72 aa0.22□□□□□ -2.37
TRAPPC13-206ENST00000504751 ANKRD11Q6UB99 2663 aaPredicted RBP0.22□□□□□ -2.37
TRAPPC13-206ENST00000504751 DNAH7Q8WXX0 4024 aa0.22□□□□□ -2.37
TRAPPC13-206ENST00000504751 HTTP42858 3142 aa0.22□□□□□ -2.37
TRAPPC13-206ENST00000504751 CELSR3Q9NYQ7 3312 aa0.21□□□□□ -2.38
TRAPPC13-206ENST00000504751 MAP1AP78559 2803 aaPredicted RBP0.21□□□□□ -2.38
TRAPPC13-206ENST00000504751 MT1AP04731 61 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms