RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 WFDC13Q8IUB5 93 aa5.77□□□□□ -1.49
COL1A1-210ENST00000504289 ZCCHC13Q8WW36 166 aaKnown RBP5.77□□□□□ -1.49
COL1A1-210ENST00000504289 HYDINQ4G0P3 5121 aa5.76□□□□□ -1.49
COL1A1-210ENST00000504289 SPINK6Q6UWN8 80 aa5.76□□□□□ -1.49
COL1A1-210ENST00000504289 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
COL1A1-210ENST00000504289 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
COL1A1-210ENST00000504289 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
COL1A1-210ENST00000504289 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
COL1A1-210ENST00000504289 KRTAP1-4P0C5Y4 121 aa5.74□□□□□ -1.49
COL1A1-210ENST00000504289 LIMD2Q9BT23 127 aa5.74□□□□□ -1.49
COL1A1-210ENST00000504289 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
COL1A1-210ENST00000504289 A0A087X002 238 aa5.71□□□□□ -1.5
COL1A1-210ENST00000504289 RPS29P62273 56 aaKnown RBP5.71□□□□□ -1.5
COL1A1-210ENST00000504289 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
COL1A1-210ENST00000504289 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
COL1A1-210ENST00000504289 H0Y9P7 68 aa5.7□□□□□ -1.5
COL1A1-210ENST00000504289 SPINK1P00995 79 aa5.7□□□□□ -1.5
COL1A1-210ENST00000504289 PLA2G1BP04054 148 aaKnown RBP5.7□□□□□ -1.5
COL1A1-210ENST00000504289 MRPL34Q9BQ48 92 aaKnown RBP5.7□□□□□ -1.5
COL1A1-210ENST00000504289 C4orf48Q5BLP8 95 aa5.69□□□□□ -1.5
COL1A1-210ENST00000504289 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
COL1A1-210ENST00000504289 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
COL1A1-210ENST00000504289 HERC2O95714 4834 aa5.68□□□□□ -1.5
COL1A1-210ENST00000504289 SPANXA2-OT1Q8N9U9 137 aa5.68□□□□□ -1.5
COL1A1-210ENST00000504289 DYNC1H1Q14204 4646 aaKnown RBP5.67□□□□□ -1.5
COL1A1-210ENST00000504289 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
COL1A1-210ENST00000504289 TYMSOSQ8TAI1 123 aa5.67□□□□□ -1.5
COL1A1-210ENST00000504289 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
COL1A1-210ENST00000504289 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
COL1A1-210ENST00000504289 C1orf195Q5TG92 126 aa5.66□□□□□ -1.5
COL1A1-210ENST00000504289 C1orf64Q8NEQ6 169 aa5.65□□□□□ -1.5
COL1A1-210ENST00000504289 V9GYY9 64 aa5.65□□□□□ -1.5
COL1A1-210ENST00000504289 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
COL1A1-210ENST00000504289 PCLOQ9Y6V0 5065 aa5.63□□□□□ -1.51
COL1A1-210ENST00000504289 LINC00313P59037 77 aa5.63□□□□□ -1.51
COL1A1-210ENST00000504289 SEC61GP60059 68 aa5.62□□□□□ -1.51
COL1A1-210ENST00000504289 LOC101927531A0A1B0GV80 90 aa5.61□□□□□ -1.51
COL1A1-210ENST00000504289 NDUFS5O43920 106 aa5.61□□□□□ -1.51
COL1A1-210ENST00000504289 KRTAP10-4P60372 401 aaPredicted RBP5.61□□□□□ -1.51
COL1A1-210ENST00000504289 Q8N9P0 234 aaPredicted RBP5.61□□□□□ -1.51
COL1A1-210ENST00000504289 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
COL1A1-210ENST00000504289 NOTCH2NLQ7Z3S9 236 aa5.6□□□□□ -1.51
COL1A1-210ENST00000504289 FAM229AH3BQW9 127 aa5.59□□□□□ -1.51
COL1A1-210ENST00000504289 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
COL1A1-210ENST00000504289 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
COL1A1-210ENST00000504289 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
COL1A1-210ENST00000504289 RYR1P21817 5038 aa5.57□□□□□ -1.52
COL1A1-210ENST00000504289 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
COL1A1-210ENST00000504289 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
COL1A1-210ENST00000504289 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
COL1A1-210ENST00000504289 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
COL1A1-210ENST00000504289 KRTAP16-1A8MUX0 517 aa5.55□□□□□ -1.52
COL1A1-210ENST00000504289 Q1T7F1 81 aa5.54□□□□□ -1.52
COL1A1-210ENST00000504289 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
COL1A1-210ENST00000504289 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
COL1A1-210ENST00000504289 Q5W150 140 aa5.51□□□□□ -1.53
COL1A1-210ENST00000504289 FAT1Q14517 4588 aa5.49□□□□□ -1.53
COL1A1-210ENST00000504289 IGKV2-30P06310 120 aa5.47□□□□□ -1.53
COL1A1-210ENST00000504289 PCOTHQ58A44 107 aa5.47□□□□□ -1.53
COL1A1-210ENST00000504289 PRR4Q16378 134 aa5.46□□□□□ -1.54
COL1A1-210ENST00000504289 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.54
COL1A1-210ENST00000504289 KRTAP4-5Q9BYR2 181 aa5.46□□□□□ -1.54
COL1A1-210ENST00000504289 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
COL1A1-210ENST00000504289 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
COL1A1-210ENST00000504289 Q5VSD8 79 aa5.44□□□□□ -1.54
COL1A1-210ENST00000504289 COA5Q86WW8 74 aa5.43□□□□□ -1.54
COL1A1-210ENST00000504289 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
COL1A1-210ENST00000504289 A8MUU9 505 aa5.42□□□□□ -1.54
COL1A1-210ENST00000504289 ACYP2P14621 99 aa5.42□□□□□ -1.54
COL1A1-210ENST00000504289 HRES1P13985 223 aa5.4□□□□□ -1.54
COL1A1-210ENST00000504289 DMAC1Q96GE9 116 aa5.4□□□□□ -1.54
COL1A1-210ENST00000504289 FLG2Q5D862 2391 aaPredicted RBP5.39□□□□□ -1.55
COL1A1-210ENST00000504289 HSPG2P98160 4391 aa5.39□□□□□ -1.55
COL1A1-210ENST00000504289 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
COL1A1-210ENST00000504289 Q8N1X5 172 aa5.37□□□□□ -1.55
COL1A1-210ENST00000504289 Q75L30 129 aa5.36□□□□□ -1.55
COL1A1-210ENST00000504289 A8MUN3 132 aa5.35□□□□□ -1.55
COL1A1-210ENST00000504289 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
COL1A1-210ENST00000504289 RETNLBQ9BQ08 111 aa5.34□□□□□ -1.55
COL1A1-210ENST00000504289 ATP11AUNQ6ZP68 121 aa5.32□□□□□ -1.56
COL1A1-210ENST00000504289 LINC01558Q9Y6Z2 57 aa5.32□□□□□ -1.56
COL1A1-210ENST00000504289 TNXBP22105 4242 aa5.32□□□□□ -1.56
COL1A1-210ENST00000504289 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
COL1A1-210ENST00000504289 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
COL1A1-210ENST00000504289 Q5VV11 94 aa5.3□□□□□ -1.56
COL1A1-210ENST00000504289 FAT3Q8TDW7 4589 aa5.3□□□□□ -1.56
COL1A1-210ENST00000504289 CHKB-CPT1BH3BT56 60 aa5.29□□□□□ -1.56
COL1A1-210ENST00000504289 PSPHP1O15172 72 aa5.28□□□□□ -1.56
COL1A1-210ENST00000504289 DMBT1Q9UGM3 2413 aaPredicted RBP5.27□□□□□ -1.57
COL1A1-210ENST00000504289 HERC1Q15751 4861 aa5.26□□□□□ -1.57
COL1A1-210ENST00000504289 MT1HL1P0DM35 61 aa5.26□□□□□ -1.57
COL1A1-210ENST00000504289 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
COL1A1-210ENST00000504289 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
COL1A1-210ENST00000504289 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
COL1A1-210ENST00000504289 SPINK7P58062 85 aa5.23□□□□□ -1.57
COL1A1-210ENST00000504289 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
COL1A1-210ENST00000504289 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
COL1A1-210ENST00000504289 RBM12B-AS1Q9P1G2 102 aa5.23□□□□□ -1.57
COL1A1-210ENST00000504289 A6NN06 94 aa5.22□□□□□ -1.57
COL1A1-210ENST00000504289 XP32Q5T750 250 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms